BAC Information

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BAC

Clone NameB6Ng01-257B22
Chromosome13 (Build37)
Map Location 107,998,807 - 107,999,941
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322
Downstream geneLOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257B22.bB6Ng01-257B22.g
ACCGA062899GA062900
length1,1871,120
definitionB6Ng01-257B22.b B6Ng01-257B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacacgggatcctaagacctctagtgagtggaacacaacttctg
ccaggagtccggttcgaacaccagatatctgggtaccttccctgcaagaa
gagagcttgcctgcagagaatactctgcccactgaaactaaggagagtgc
taccctcccaggtctgcttatagaggctaacagagtcacctgaagaacaa
gctcttaacagagacaactataacagctagcttcagagattaccagatgg
caaaaggcaaacgtaagaatcctactaacagaaatcaagaccactcacca
tcatcagaacgcagcactcccaccccacctagtcctgggcaccccaacac
aaccaaaaatctagacccagatttaaaaacatttctcatgaggatgatag
aggacatcaagaaggactttcataagccacttaaagaattacaggagagc
actgctaaagagttacaggcccttaaagaaaagcaggaaaacacaaccaa
acaggtagaagtccttaaagaaaaacaggaaaacacatccaaacaggtga
tggaaatgaacaaaaccatactagaactaaaaagggaagtagacacaata
aagaaaacccaaagcgaggcaacgctggagatagaaaccctaggaaagag
atctggaaccatagattcgagcatcagcaacagaatacaagaaatggaag
agagaatctcaggtgcagaagattccatagagaacatcgacacaaaagtc
aaagaaaatacaaaatgcaaaaggatcctaactcaaaacatccaggaaat
ccaggacacaatgagaagaccaagatagtaggaattgatgagaatgaaga
ttttcaacttaaagggccagctaatatcttcaacaaataatagaagaaaa
cttcccaacataaagaaagagatgcccatgatcatacaagaagcctacag
aactccaaatagactgggaccagaaaagaaattcctccgacacataataa
tcagaacaacaaatgcactaataagatagatattaaaagcagtaaggaga
aacgtcagtaacaatataaaggacgctatcagatacaccagacttttcac
agagactatggaaggcagaagagcctggacgatgttatacgacaccttag
gagaccaaattgcccagtcccagggcctacctaataa
gaattctccgtggttattaatacccaagttatcatttttgaaggtctcct
ttatcctgcatgaaatcagaacccatttgggacatcagcatccacttaac
acagacgttcttttcccttcaggtctattgatcaggtctatacatatatc
acacaggaagtgtggggattatctggtgataacttgtaggtggctaatta
ctgagagtctattgtagcaaacacatatgtgtacatatttcattaagaat
ggttattgccagaagaatttgatgttattgtgtgtgcatgaatagggaag
tcagataatagtggtccagcccagtttctagtttggttgcctgttatacc
caggaggctatggaaccaatatattcctttggcaagtgaagactcttgtc
tgtgtcttagaaaaatgcaaagtctgtgtgttaaggctcacccaacatct
atgtcgaagcattctttcagaaagtgtctatgtagaactccaataagcaa
cagaagacactgagctgtggccattaaaacagccagcattattgggccat
gcccaacatcctgcctgtagcagattgatccataagtggatgtccttggg
cttggctagtcaaagtcattgtccaggattttggaatctgggattccatg
agtggacctggtaagtcagctgactgaagctgcaaactgtaaagctttga
agttattagtggctatgattattggctcaaggataaaccttccagagaaa
agaataaagtcacagaaaaaagcagagacaggagctgaaggccttatata
gaggatgctgagtcccctgttcccgaagctccaggaatctgcatgtcccg
tggcttgagcaagtccttccaggaagctttcctccacaacctttgcttgc
ttattcgttcagtggctcgagctcaagctcagggttatactaatgtcgca
gcttttttctcacagcctctaaaatagtgacggaaggaagaaagtacagc
atggctgcaaaatggccggaaggggcagccatgcacagcatcattgaagt
gccacttccctgcgatcaaaggtttggtgagaaagtagtggggtgacgag
ccactgcagcctgagtcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107998807_107999941
seq2: B6Ng01-257B22.g_67_1186

seq1  GAATTCTCCGTGGTTATTAATACCCAAGTTATCATTTTTGAAGGTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTGGTTATTAATACCCAAGTTATCATTTTTGAAGGTCTCCT  50

seq1  TTATCCTGCATGAAATCAGAACCCATTTGGGACATCAGCATCCACTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGCATGAAATCAGAACCCATTTGGGACATCAGCATCCACTTAAC  100

seq1  ACAGACGTTCTTTTCCCTTCAGGTCTATTGATCAGGTCTATACATATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACGTTCTTTTCCCTTCAGGTCTATTGATCAGGTCTATACATATATC  150

seq1  ACACAGGAAGTGTGGGGATTATCTGGTGATAACTTGTAGGTGGCTAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAAGTGTGGGGATTATCTGGTGATAACTTGTAGGTGGCTAATTA  200

seq1  CTGAGAGTCTATTGTAGCAAACACATATGTGTACATATTTCATTAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTCTATTGTAGCAAACACATATGTGTACATATTTCATTAAGAAT  250

seq1  GGTTATTGCCAGAAGAATTTGATGTTATTGTGTGTGCATGAATAGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGCCAGAAGAATTTGATGTTATTGTGTGTGCATGAATAGGGAAG  300

seq1  TCAGATAATAGTGGTCCAGCCCAGTTTCTAGTTTGGTTGCCTGTTATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAATAGTGGTCCAGCCCAGTTTCTAGTTTGGTTGCCTGTTATACC  350

seq1  CAGGAGGCTATGGAACCAATATATTCCTTTGGCAAGTGAAGACTCTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCTATGGAACCAATATATTCCTTTGGCAAGTGAAGACTCTTGTC  400

seq1  TGTGTCTTAGAAAAATGCAAAGTCTGTGTGTTAAGGCTCACCCAACATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTAGAAAAATGCAAAGTCTGTGTGTTAAGGCTCACCCAACATCT  450

seq1  ATGTCGAAGCATTCTTTCAGAAAGTGTCTATGTAGAACTCCAATAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCGAAGCATTCTTTCAGAAAGTGTCTATGTAGAACTCCAATAAGCAA  500

seq1  CAGAAGACACTGAGCTGTGGCCATTAAAACAGCCAGCATTATTGGGCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACACTGAGCTGTGGCCATTAAAACAGCCAGCATTATTGGGCCAT  550

seq1  GCCCAACATCCTGCCTGTAGCAGATTGATCCATAAGTGGATGTCCTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACATCCTGCCTGTAGCAGATTGATCCATAAGTGGATGTCCTTGGG  600

seq1  CTTGGCTAGTCAAAGTCATTGTCCAGGATTTTGGAATCTGGGATTCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAGTCAAAGTCATTGTCCAGGATTTTGGAATCTGGGATTCCATG  650

seq1  AGTGGACCTGGTAAGTCAGCTGACTGAAGCTGCAAACTGTAAAGCTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACCTGGTAAGTCAGCTGACTGAAGCTGCAAACTGTAAAGCTTTGA  700

seq1  AGTTATTAGTGGCTATGATTATTGGCTCAAGGATAAACCTTCCAGAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTAGTGGCTATGATTATTGGCTCAAGGATAAACCTTCCAGAGAAA  750

seq1  AGAATAAAGTCACAGAAAAAAGCAGAGACAGGAGCTGAAGGCCTTATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGTCACAGAAAAAAGCAGAGACAGGAGCTGAAGGCCTTATATA  800

seq1  GAGGATGCTGAGTCCCCTGTTCCCGAAGCTCCAGGAATCTGCATGTCCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGCTGAGTCCCCTGTTCCCGAAGCTCCAGGAATCTGCATGTCCCG  850

seq1  TGGCTTGAGCAAGTCCTTCCAGGAAGCTTTCCTCCACAACCTTTGCTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAGCAAGTCCTTCCAGGAAGCTTTCCTCCACAACCTTTGCTTGC  900

seq1  TTATTCGTTCAGTGGCTCGAGCTCAAGCTCAGGGGTTATAACTAATGTCG  950
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TTATTCGTTCAGTGGCTCGAGCTCAAGCTCA-GGGTTAT-ACTAATGTCG  948

seq1  CAGC-TATTTCTCACAGCCTCTAAAAATAGTGACGGAAGGAAGAAAGTAC  999
      |||| | ||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGCTTTTTTCTCACAGCCTCT-AAAATAGTGACGGAAGGAAGAAAGTAC  997

seq1  AGCAATGGCTGCAAAAATGGCCCGGGAAGGGGGCAAGCCATGGCACAGCA  1049
      ||| |||||||| |||||||||  ||||||||   |||||| ||||||| 
seq2  AGC-ATGGCTGC-AAAATGGCC--GGAAGGGG--CAGCCAT-GCACAGC-  1039

seq1  ATCATTGAAGTGCCACTTCCCTGGCGATCAAAGG-TTGGTGAGAAAAGGA  1098
      |||||||||||||||||||||| ||||||||||| |||||||||||  | 
seq2  ATCATTGAAGTGCCACTTCCCT-GCGATCAAAGGTTTGGTGAGAAA--GT  1086

seq1  AGTGGGGGTGAAGAGCCACTGCAGCCTGGAAGTCATC  1135
      ||| ||||||| ||||||||||||||||  |||||||
seq2  AGT-GGGGTGACGAGCCACTGCAGCCTG--AGTCATC  1120