BAC Information

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BAC

Clone NameB6Ng01-257H13
Chromosome13 (Build37)
Map Location 6,067,834 - 6,069,005
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6
Downstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257H13.bB6Ng01-257H13.g
ACCGA063161GA063162
length1,2101,180
definitionB6Ng01-257H13.b B6Ng01-257H13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacatcttcatctgaaggctgctagcagagtacttgcttccagg
cagctaaaacgaggttcttaaagcccacacccacagtgccatgcctactc
caaaaaggccatgcctactcaaacagggccacacctctaaatagtgccac
tcctttggccaagcatattcaaaccatgacaatccttgctcccatagact
tgttcaaacatggatctatggggggccatacctaaacatagcataatgca
aaatacatgcagttcaactttcaaagtccccatagtctattgcagtctca
acaatgttaaaagtccaaagttcacagtgtcttctgagattcatccaatc
acttgtaataatccccaaagcaagacaggaaacaaggtgggcaaactcca
aaccctgcatctccatgtctgatgtcaaagtaatcttcagatctccaact
cctttttcatctttgtcaactgcaacaaacttctttctcctgggccggta
cctctccttgttatcagcttttctcagcagatagcccatggctctggcat
ctcaaaaatcttggactcctcagtgatgcatggtgggaagcgtgaagata
gccatagtgctgaagatgtagctgggggttctctgtcaggatccacgagg
aaacaggaagagataatcagtcaccacacctggcttgagcatctgaaact
tcaaagcctacccccagtgacacattttctccaaaaaggacataccttct
aatggtgccacttcctatgagcctatgaaggcattttcattcaaaccacc
acaccattttactttttgagacagagtccgtcattgaacctggatcttgc
tgattcaactagactggcttcgaaccaagccatgggaattctcctgtctc
cacttccccagagccagaaccactgtgcataccacatagctgggctgttt
gagtgagttctagaggaccaaactcaggtcttgtgtttgtatagcaagca
tttaaatgaaatagccatcttttgtgcccttcaatagtgttccaagacag
gtagctggaatagggcatgtaacattacacagcagctcacggagagatgc
tgccatgggaagggaaaagggttagatatatatgtgaatgcttccaagct
accggttccatgacatgacatggaatccaagcctttgaaatttataataa
ttctcttact

gaattccatgctttctgttatattttcctttgctattagaagatattttt
aatagtatgagtcctttatttctcttttaaaaattgtagggttgcaatta
ttatggtagattattttgatacattattgcatacccttcattatacattt
cctaaaatataatttatcactgaaatactgttggttcacaatgatgattt
tatataaataatgaactcgtgaaacatgactgttatgttctgttttgttt
taatttatttatctctgtgacagtgcttgcaagacacaagggcaacttga
agaagttggttctcttaccttgtaggccctgggtattgagttcaggttat
caggtttggttacaatctcctttatctgctgacacttgttttagttttat
cagtgttcatctctatacaaagtcatgagcttcttcaattttggaaattt
ctgatcatttattgccagtttattgacaaaatgtatcaatattgactttg
cctccatttgctcaattagcatcagtttaaaacttctcaattgatcttta
atagcctttatagttaatttttaagtggataaataaacccatcgactacc
ttatgccatctccatgcacatgtctcattgtgtttctttctgattttccc
ttcctcactgactttccttatgccccctttctcctgcagagtggttgagt
ggttccttcctactcttccatatctcatgtaactctcttgcctcccttaa
gatttcttctgcttatccatgctccatatttgtgcttttctttgttcccc
cacacacaccccacacctttggtctcaagttattctctctgaatctggct
aatttcattgagcacaataatttccagtcccattcatttccttttagcta
ccaggacttcattgctcttgatggccaagtaaaatttattttatatacat
gtaccaccatttcctttatccatctatatgttgctggaacaccttgactt
ttttccaattcctgggctgttttgaaacacctgcagcattattgaagata
ctacacatgatatttaacatgtttatccctatttgcatacagtcatccct
ggaactggtaggcctacatctcacttaatgtctagtcctcacaatggtgg
tttttaaatctttactgcatcttgtctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6067834_6069005
seq2: B6Ng01-257H13.g_65_1244

seq1  GAATTCCATGCTTTCTGTTATATTTTCCTTTGCTATTAGAAGATATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTTTCTGTTATATTTTCCTTTGCTATTAGAAGATATTTTT  50

seq1  AATAGTATGAGTCCTTTATTTCTCTTTTAAAAATTGTAGGGTTGCAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATGAGTCCTTTATTTCTCTTTTAAAAATTGTAGGGTTGCAATTA  100

seq1  TTATGGTAGATTATTTTGATACATTATTGCATACCCTTCATTATACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTAGATTATTTTGATACATTATTGCATACCCTTCATTATACATTT  150

seq1  CCTAAAATATAATTTATCACTGAAATACTGTTGGTTCACAATGATGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATATAATTTATCACTGAAATACTGTTGGTTCACAATGATGATTT  200

seq1  TATATAAATAATGAACTCGTGAAACATGACTGTTATGTTCTGTTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATAATGAACTCGTGAAACATGACTGTTATGTTCTGTTTTGTTT  250

seq1  TAATTTATTTATCTCTGTGACAGTGCTTGCAAGACACAAGGGCAACTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTTATCTCTGTGACAGTGCTTGCAAGACACAAGGGCAACTTGA  300

seq1  AGAAGTTGGTTCTCTTACCTTGTAGGCCCTGGGTATTGAGTTCAGGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGGTTCTCTTACCTTGTAGGCCCTGGGTATTGAGTTCAGGTTAT  350

seq1  CAGGTTTGGTTACAATCTCCTTTATCTGCTGACACTTGTTTTAGTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGGTTACAATCTCCTTTATCTGCTGACACTTGTTTTAGTTTTAT  400

seq1  CAGTGTTCATCTCTATACAAAGTCATGAGCTTCTTCAATTTTGGAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCATCTCTATACAAAGTCATGAGCTTCTTCAATTTTGGAAATTT  450

seq1  CTGATCATTTATTGCCAGTTTATTGACAAAATGTATCAATATTGACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATTTATTGCCAGTTTATTGACAAAATGTATCAATATTGACTTTG  500

seq1  CCTCCATTTGCTCAATTAGCATCAGTTTAAAACTTCTCAATTGATCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTTGCTCAATTAGCATCAGTTTAAAACTTCTCAATTGATCTTTA  550

seq1  ATAGCCTTTATAGTTAATTTTTAAGTGGATAAATAAACCCATCGACTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTTATAGTTAATTTTTAAGTGGATAAATAAACCCATCGACTACC  600

seq1  TTATGCCATCTCCATGCACATGTCTCATTGTGTTTCTTTCTGATTTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCATCTCCATGCACATGTCTCATTGTGTTTCTTTCTGATTTTCCC  650

seq1  TTCCTCACTGACTTTCCTTATGCCCCCTTTCTCCTGCAGAGTGGTTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACTGACTTTCCTTATGCCCCCTTTCTCCTGCAGAGTGGTTGAGT  700

seq1  GGTTCCTTCCTACTCTTCCATATCTCATGTAACTCTCTTGCCTCCCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTTCCTACTCTTCCATATCTCATGTAACTCTCTTGCCTCCCTTAA  750

seq1  GATTTCTTCTGCTTATCCATGCTCCATATTTGTGC-TTTCTTTGTTCCCC  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GATTTCTTCTGCTTATCCATGCTCCATATTTGTGCTTTTCTTTGTTCCCC  800

seq1  CACACACACCCCACACC-TTGGTCTCAAGTTATTCTCTCTGAATCTGGCT  848
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACACACACCCCACACCTTTGGTCTCAAGTTATTCTCTCTGAATCTGGCT  850

seq1  AATTTCATTGAGCACAATAATTTCCAGTCCCATTCATTTCC-TTTAGCTA  897
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATTTCATTGAGCACAATAATTTCCAGTCCCATTCATTTCCTTTTAGCTA  900

seq1  CCAGGACTTCATTGCTCTTGATGGCCAAGTAAAA-TTATTTTATATACAT  946
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCAGGACTTCATTGCTCTTGATGGCCAAGTAAAATTTATTTTATATACAT  950

seq1  GTACCA-CATTTCCTTTATCCATCTATATGTTGCTGG-ACACCTTGAC-T  993
      |||||| |||||||||||||||||||||||||||||| |||||||||| |
seq2  GTACCACCATTTCCTTTATCCATCTATATGTTGCTGGAACACCTTGACTT  1000

seq1  TTTTCCATTTCCT-GGCTGTTTTG-AACA-CTGCAGCAATA-TGAAGATA  1039
      ||||||| ||||| |||||||||| |||| |||||||| || ||||||||
seq2  TTTTCCAATTCCTGGGCTGTTTTGAAACACCTGCAGCATTATTGAAGATA  1050

seq1  CTTACACATGATATTTAACATGTTTATTCCTATTTCCATACAGTCATTCC  1089
      | ||||||||||||||||||||||||| ||||||| ||||||||||| ||
seq2  C-TACACATGATATTTAACATGTTTATCCCTATTTGCATACAGTCATCCC  1099

seq1  TG--ACCTGTAGG-CTACATCCTCACTT-ATGTCTAGTTCCTCACATATG  1135
      ||  ||  ||||| |||||| ||||||| |||||||| |||||||| |||
seq2  TGGAACTGGTAGGCCTACAT-CTCACTTAATGTCTAG-TCCTCACA-ATG  1146

seq1  TTGTGTTTTTAAAATAAATTACTGCATCTTGTTTCTC  1172
       || |||||||||     |||||||||||||| ||||
seq2  GTG-GTTTTTAAA--TCTTTACTGCATCTTGTCTCTC  1180


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