BAC Information

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BAC

Clone NameB6Ng01-258P04
Chromosome13 (Build37)
Map Location 26,267,771 - 26,268,391
singlet/doubletsinglet
Overlap genenone
Upstream geneNrsn1, Tpi-rs8, LOC214973
Downstream geneLOC666221, LOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957, Prl, Prl3d1, Prl3d2, Prl3d3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258P04.bB6Ng01-258P04.g
ACCGA064256GA064257
length1,0301,192
definitionB6Ng01-258P04.b B6Ng01-258P04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcttccagacataaaaatagcacatttaaaatattattcattgca
tagtgtcttctgtcactttcaacattcagcctagctcatattttcaagaa
agtctttaaattacttttattggagagccacagagcttctgaggtggcac
catcttcggctccagacaaccgaccaccttcctggtgagtgcacagggat
ctgccagcccgagaggtttgtgcctcaggccctggcagcgggagtctcct
tggctccaggactccgcggagggcaggctgcacgggtgacggtgtggaat
acagaggccagccgtttctgggaaaggcgagagccgagagcttctgaggt
ggcgccatcttcggctccagacaaccgaccaccttcctggcgagagccac
agagcttttgaggcggcgccaccttcggctccggacaactggccacctta
ctggacaaagcaacacagcttctgggaaagatcctgttttgggccttcat
cttcagccaggaggaggtccaaacaccagataagtgtgcaccttccctga
aagaggagagcttgcctgcagagactgctctgaccactgaaactcagagg
agagagctagtctcccacgtctgctgatagagggtaacaaaatcaccaga
ggaacaatctctaaacaaagacaactataacaactaactccagagattgc
cagatggcgaaaggtaaacgtaagaatcctactaacaggaaccaagacca
ctcaccatcatcagaacccagcactcccacttcgcccagtccaggacatc
ctaacaaacctgaaaaggtagacctggatttaaaagcatttctcatgatg
atggtagaggacataaagcaggaatttaataactcacttaaaggaaatac
aggagaacactgctaaagagttacaagttcttaaagaaaaacaggaaaac
acaaccaaacaggtagaagtccttatagaaaacaggaaaacacatcgaaa
cagtgatagaaatgaacaaaaccatactag

gaattcccctacactggagcatcaagccttcctaggcctctcctcccatt
ggtgcccaacaaggacatcctctgctacataagctgctggagacatgggt
tcccccatgtgtactctttggttgctgatttagtccctgggagctctggg
ggctctgattggttgatattgttgttcatccaatgggttgtaaacccctt
caccgccttaagtcattactccaactcctccattgaggaccccatgctca
gcccaatgattgactgtgagcatctcatctgcctctgtatttgtcaggct
ctggcagagtctctcaggagacagctatatcaggctcctgtaagcaagca
cttcttgacaccagcaatagtgtctggtttggtgagtgtatacaggatgg
attcccaggtaggcagctctgaatggcctttcctcagtctctgttccaca
agccttcacaaactaaatattccttaacctcctcaaacagtggcccctct
gggaatcagttgtccaaataatttaacctatggagaaccatttttcattc
aagtcatcacatgtgccatgaccaaaaattaaccaaaaatggataaaaga
cctcaatgtaagaatggaaagtacaactcttagaaaaccatcataaatct
ccaaagtttatgtttagcaataaattcttaaatacaacagttaaatagaa
agcatgacaaaaaagattagatttgattaaacacacacacacacacacac
acacacacacacacacacactttcctactttcctctgtccttatgatgca
gtattctttcttaaagtactttatgggatgaccatccttatggtcatatt
caattcctggggcagtcaggcatacactcaagcagaaacttgaataggag
ccatggagggatgctgcctactgtcttgcttccacacagatttatgctta
ctcgctttcatatacatcctggacactgtgcatggatgatggagctcaca
ctgttcgggaaatccttatatcattgatatcagacatctcccacaaatat
acctcattggcaaatcagatcgataatattcttcactgagattcattcct
ctggcactgcatgctgtgtcaggttgacatccaagttaatcgcacttaat
tacacggacttagatatttacatggtacaccccggaaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26267771_26268391
seq2: B6Ng01-258P04.b_45_665

seq1  GAATTCTTCCAGACATAAAAATAGCACATTTAAAATATTATTCATTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAGACATAAAAATAGCACATTTAAAATATTATTCATTGCAT  50

seq1  AGTGTCTTCTGTCACTTTCAACATTCAGCCTAGCTCATATTTTCAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTCTGTCACTTTCAACATTCAGCCTAGCTCATATTTTCAAGAAA  100

seq1  GTCTTTAAATTACTTTTATTGGAGAGCCACAGAGCTTCTGAGGTGGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAAATTACTTTTATTGGAGAGCCACAGAGCTTCTGAGGTGGCACC  150

seq1  ATCTTCGGCTCCAGACAACCGACCACCTTCCTGGTGAGTGCACAGGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGGCTCCAGACAACCGACCACCTTCCTGGTGAGTGCACAGGGATC  200

seq1  TGCCAGCCCGAGAGGTTTGTGCCTCAGGCCCTGGCAGCGGGAGTCTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCCCGAGAGGTTTGTGCCTCAGGCCCTGGCAGCGGGAGTCTCCTT  250

seq1  GGCTCCAGGACTCCGCGGAGGGCAGGCTGCACGGGTGACGGTGTGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGGACTCCGCGGAGGGCAGGCTGCACGGGTGACGGTGTGGAATA  300

seq1  CAGAGGCCAGCCGTTTCTGGGAAAGGCGAGAGCCGAGAGCTTCTGAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCCAGCCGTTTCTGGGAAAGGCGAGAGCCGAGAGCTTCTGAGGTG  350

seq1  GCGCCATCTTCGGCTCCAGACAACCGACCACCTTCCTGGCGAGAGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCATCTTCGGCTCCAGACAACCGACCACCTTCCTGGCGAGAGCCACA  400

seq1  GAGCTTTTGAGGCGGCGCCACCTTCGGCTCCGGACAACTGGCCACCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTGAGGCGGCGCCACCTTCGGCTCCGGACAACTGGCCACCTTAC  450

seq1  TGGACAAAGCAACACAGCTTCTGGGAAAGATCCTGTTTTGGGCCTTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAAGCAACACAGCTTCTGGGAAAGATCCTGTTTTGGGCCTTCATC  500

seq1  TTCAGCCAGGAGGAGGTCCAAACACCAGATAAGTGTGCACCTTCCCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCAGGAGGAGGTCCAAACACCAGATAAGTGTGCACCTTCCCTGAA  550

seq1  AGAGGAGAGCTTGCCTGCAGAGACTGCTCTGACCACTGAAACTCAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAGCTTGCCTGCAGAGACTGCTCTGACCACTGAAACTCAGAGGA  600

seq1  GAGAGCTAGTCTCCCACGTCT  621
      |||||||||||||||||||||
seq2  GAGAGCTAGTCTCCCACGTCT  621


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