BAC Information

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BAC

Clone NameB6Ng01-261P07
Chromosome13 (Build37)
Map Location 81,764,323 - 81,765,429
singlet/doubletsinglet
Overlap geneGpr98
Upstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984
Downstream geneLysmd3, Polr3g, 2900024O10Rik, Cetn3, LOC238756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261P07.bB6Ng01-261P07.g
ACCGA066499GA066500
length7951,106
definitionB6Ng01-261P07.b B6Ng01-261P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaagaatcttgaaagtctgtgaagtacttaaagaaatg
ttcaatatccttaatcatcagggaaatgcatatcaaatcaaccctgagag
tctaccttacaccagtcagaatggctaaggtcaaaaacacaagcaatagc
acatgctggagaggatgtggaaaaagaggaacattctccattgatagtgg
gattgcaaacttggacaaacactctagaaatcaatgtgtctgtttctcag
aaaactggaaatagttctacctatatcaccaagctataccactcctgggc
atatacccaaaagatgctccaacataccacaaggtcacatgctccactat
gttcatatcagctttattcataagagccagaaactggaaccaacccagat
gtccttcaactgaagaatgaatacagaaaatgtggttcatttacacaaat
gaatagtaccctactgttaaaaacaaggacatcaagccaggtgtggtggc
acacgcctttaatcccagcacttgggaggcagaggcaggcggatttctga
gtttgaggccagcctggtctacagagtgagttccagggctacacagagaa
accctgtctcaaaacaaaaacaaaaacaaaaacaaaaaacaaacaaaaaa
accaaaaaccaaggacatcatgaattttacaggccaatggatggaactag
aaaatatcatcctgagtgaggtaactcagacccaaaaggacatgcatggt
atgtactcaagaagtacacagaatggtgtgaggggtggggtgggg

gaattcaaagggcagaacgaaacagaccatcaagaattgggggaaaaata
ccattcaaataaaagatgaaattaggggctggagagatggctcagcagtt
aagagcactgactgctcttccagaggtcctgagttcaaatcccagcaacc
acatggtggctcacaaccatctgtaacaagatctggcgccctcttctgga
gtgtctgaagacagctacagtgtacttacatataataaataaataagtct
ttttttaaaaagatgaaattaataatccacaaatgaacaaaaactatgag
aatttctttctcataaccttcctttcaagaaaggattttcagagcaatat
ttaagggcactagaaagtaaactgaatctgtatgaaaaaattagggacta
ctagtaaagctcccacaacagaagtgcataaaatccaaaacaggagttat
gacacacaggaaaggtggttttgctggtggtgatgggtttgtgtttgttt
cctttgggggtcgaggtttctttgttttgttttgtttctgttcttttcaa
tcttgtgggctgactgaagagctctgcacatacttagcttaataactgac
catggttgttaggtttgagttctgtgatacccagggcaacgaacagaatc
aacagaaggaacagaataaaagcagcagcctggaagctgagacgcttctg
gggaaatgcctttttaaaaagaggagcagctgaggagcctgggaaaggtg
atgggcgttaaccctaacatgtctgtaatcagatcaaatgtgaataaatt
atgcagcatagtgtcacagccacctttcttaaatgctttttctcaggaag
tcaaaaatcataatctcttcaacaaatccacgtagacactgtacacccaa
atggaaataaaagtagttaagcccaaaattcttaacacaaaatgttaata
agagttaaaactggtaaacttagagacctgctaataattttctgtgggct
tttgggttaggaaacggtttcatagctatggattccaaggcataagaact
taaggaaactctactaatcattgacttattagctctgttacagcttccaa
ggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81764323_81765429
seq2: B6Ng01-261P07.g_65_1170

seq1  GAATTCAAAGGGCAGAACGAAACAGACCATCAAGAATTGGGGGAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGGCAGAACGAAACAGACCATCAAGAATTGGGGGAAAAATA  50

seq1  CCATTCAAATAAAAGATGAAATTAGGGGCTGGAGAGATGGCTCAGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAAATAAAAGATGAAATTAGGGGCTGGAGAGATGGCTCAGCAGTT  100

seq1  AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACC  150

seq1  ACATGGTGGCTCACAACCATCTGTAACAAGATCTGGCGCCCTCTTCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGGCTCACAACCATCTGTAACAAGATCTGGCGCCCTCTTCTGGA  200

seq1  GTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAATAAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAATAAGTCT  250

seq1  TTTTTTAAAAAGATGAAATTAATAATCCACAAATGAACAAAAACTATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAAGATGAAATTAATAATCCACAAATGAACAAAAACTATGAG  300

seq1  AATTTCTTTCTCATAACCTTCCTTTCAAGAAAGGATTTTCAGAGCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTCTCATAACCTTCCTTTCAAGAAAGGATTTTCAGAGCAATAT  350

seq1  TTAAGGGCACTAGAAAGTAAACTGAATCTGTATGAAAAAATTAGGGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGCACTAGAAAGTAAACTGAATCTGTATGAAAAAATTAGGGACTA  400

seq1  CTAGTAAAGCTCCCACAACAGAAGTGCATAAAATCCAAAACAGGAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAAGCTCCCACAACAGAAGTGCATAAAATCCAAAACAGGAGTTAT  450

seq1  GACACACAGGAAAGGTGGTTTTGCTGGTGGTGATGGGTTTGTGTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGGAAAGGTGGTTTTGCTGGTGGTGATGGGTTTGTGTTTGTTT  500

seq1  CCTTTGGGGGTCGAGGTTTCTTTGTTTTGTTTTGTTTCTGTTCTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGGGTCGAGGTTTCTTTGTTTTGTTTTGTTTCTGTTCTTTTCAA  550

seq1  TCTTGTGGGCTGACTGAAGAGCTCTGCACATACTTAGCTTAATAACTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGGCTGACTGAAGAGCTCTGCACATACTTAGCTTAATAACTGAC  600

seq1  CATGGTTGTTAGGTTTGAGTTCTGTGATACCCAGGGCAACGAACAGAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTGTTAGGTTTGAGTTCTGTGATACCCAGGGCAACGAACAGAATC  650

seq1  AACAGAAGGAACAGAATAAAAGCAGCAGCCTGGAAGCTGAGACGCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGGAACAGAATAAAAGCAGCAGCCTGGAAGCTGAGACGCTTCTG  700

seq1  GGGAAATGCCTTTTTAAAAAGAGGAGCAGCTGAGGAGCCTGGGAAAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGCCTTTTTAAAAAGAGGAGCAGCTGAGGAGCCTGGGAAAGGTG  750

seq1  ATGGGCGTTAACCCTAACATGTCTGTAATCAGATCAAATGTGAATAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCGTTAACCCTAACATGTCTGTAATCAGATCAAATGTGAATAAATT  800

seq1  ATGCAGCATAGTGTCACAGCCACCTTTCTTAAATGCTTTTTCTCAGGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCATAGTGTCACAGCCACCTTTCTTAAATGCTTTTTCTCAGGAAG  850

seq1  TCAAAAATCATAATCTCTTCAACAAATCCACGTAGACACTGTACACCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATCATAATCTCTTCAACAAATCCACGTAGACACTGTACACCCAA  900

seq1  ATGGAAATAAAAGTAGTTAAGCCCAAAATTCTTAACACAAAATG-TAATA  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGGAAATAAAAGTAGTTAAGCCCAAAATTCTTAACACAAAATGTTAATA  950

seq1  AGAGTTAAAACTGTAAAACTTAAGAGACCTGCTAATAAATTTCTGTGG--  997
      |||||||||||||  |||||| |||||||||||||||| |||||||||  
seq2  AGAGTTAAAACTGGTAAACTT-AGAGACCTGCTAATAATTTTCTGTGGGC  999

seq1  CTTTGGGTTAGGAAACGGTTTTATAGCTAT-GATACCAAAGCATAAGAAA  1046
       |||||||||||||||||||| |||||||| ||| |||| ||||||| ||
seq2  TTTTGGGTTAGGAAACGGTTTCATAGCTATGGATTCCAAGGCATAAG-AA  1048

seq1  CTAAAGAAAACT-TACATAAATCATTGACATATTAGCTCTGTTACCAGCT  1095
      || ||| ||||| |||   |||||||||| |||||||||||||| |||||
seq2  CTTAAGGAAACTCTAC--TAATCATTGACTTATTAGCTCTGTTA-CAGCT  1095

seq1  CCCAAAGGAAGA  1107
       || ||||||||
seq2  TCC-AAGGAAGA  1106


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