BAC Information

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BAC

Clone NameB6Ng01-262K23
Chromosome13 (Build37)
Map Location 81,623,754 - 81,624,857
singlet/doubletsinglet
Overlap geneGpr98
Upstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984
Downstream geneLysmd3, Polr3g, 2900024O10Rik, Cetn3, LOC238756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262K23.bB6Ng01-262K23.g
ACCGA067034GA067035
length1,2071,101
definitionB6Ng01-262K23.b B6Ng01-262K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaacggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttaagtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtaataaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaactcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgacaatccatgagcatgggagatccttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagtagagtcacgccaagatattttatattattt
gcgactattgagaagggtgttgtttccctaatttctttcctcagcctgtt
attctttgtatagagaaaggccattgacttgtttgagttatttttaatat
cagctacctcacagaagctgtttatcacttaggagttctctgtggaattt
tgggtcacttaatatacctatcatatccatctggcaaaggtaatttgacc
tccgtccaatgatgcctgaatcctttgtgcaaatgactctgggcgtaact
ctccaga
gaattctataacttcaattagcagcccatctgaacaaaacacttcttcct
taaaaacattcattaggtaactactgtgagaatcaggaggtgacctgagt
agacaccatctgaaaaactgaaggatgacagaagcagaaatgaaggtccc
aattaaaggataagtagggggtagagctaacaaacataacaaaggataca
gaatgtgttcagtaaatccgctgttgagtggataagaaagccaatcctct
tgcacatcataggaaaacaacatgtccatgtccgtgtgagcacgaaaggt
ttgccttcaaggctcaggggagagtgagacaagtgtggggactggaaagg
cacacagaggaccaggtagaaattagaatgtacaggatgaatgcagagcc
acgaggaaggaaagagagacatagaaaccaaggaagctccgtaagagaac
ttggcttaaaacaaaaaacagaaacccacagggcaaacctcccattcgag
ctcagtggctgagggagatgaatgaccctgctgggagatgcaacgctgaa
ttatgactccacagagaagagaaaaccagactcctgtaggtttgactaat
tctgctcatcttctgtactttgctctattgtttaactgtgtaatcttgcc
tacccccaaggatcagagtctgaaatctaaacctctcactttctcctaaa
tcggtgccacaacaccaaccacctgggatgctaaccattaccttgcacta
cagccacctagagccaaactgctgactgctatcaatagacacatttccct
acagccttcctcagtttcaaactaagattcttgacattgccaaggtctga
gagttttgctgcccacattcgaatagtcagaagtccgcatgaatgaagag
ttcacgtgtctctgtcctcaaattttcacgcgtataagtcccttacagct
caagaccttgttttagttgggtctagacagctgcaacacatttcctcatg
ttcttgcaccaaagcaagatgacatataaagaggggctctggagcagcaa
gtgccctctgaatgcctttcaagacttctctacctcagaaatgttcatgc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81623754_81624857
seq2: B6Ng01-262K23.g_65_1165

seq1  GAATTCTATAACTTCAATTAGCAGCCCATCTGAACAAAACACTTCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAACTTCAATTAGCAGCCCATCTGAACAAAACACTTCTTCCT  50

seq1  TAAAAACATTCATTAGGTAACTACTGTGAGAATCAGGAGGTGACCTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACATTCATTAGGTAACTACTGTGAGAATCAGGAGGTGACCTGAGT  100

seq1  AGACACCATCTGAAAAACTGAAGGATGACAGAAGCAGAAATGAAGGTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCATCTGAAAAACTGAAGGATGACAGAAGCAGAAATGAAGGTCCC  150

seq1  AATTAAAGGATAAGTAGGGGGTAGAGCTAACAAACATAACAAAGGATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGGATAAGTAGGGGGTAGAGCTAACAAACATAACAAAGGATACA  200

seq1  GAATGTGTTCAGTAAATCCGCTGTTGAGTGGATAAGAAAGCCAATCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTCAGTAAATCCGCTGTTGAGTGGATAAGAAAGCCAATCCTCT  250

seq1  TGCACATCATAGGAAAACAACATGTCCATGTCCGTGTGAGCACGAAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATCATAGGAAAACAACATGTCCATGTCCGTGTGAGCACGAAAGGT  300

seq1  TTGCCTTCAAGGCTCAGGGGAGAGTGAGACAAGTGTGGGGACTGGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCAAGGCTCAGGGGAGAGTGAGACAAGTGTGGGGACTGGAAAGG  350

seq1  CACACAGAGGACCAGGTAGAAATTAGAATGTACAGGATGAATGCAGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGGACCAGGTAGAAATTAGAATGTACAGGATGAATGCAGAGCC  400

seq1  ACGAGGAAGGAAAGAGAGACATAGAAACCAAGGAAGCTCCGTAAGAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGAAGGAAAGAGAGACATAGAAACCAAGGAAGCTCCGTAAGAGAAC  450

seq1  TTGGCTTAAAACAAAAAACAGAAACCCACAGGGCAAACCTCCCATTCGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTAAAACAAAAAACAGAAACCCACAGGGCAAACCTCCCATTCGAG  500

seq1  CTCAGTGGCTGAGGGAGATGAATGACCCTGCTGGGAGATGCAACGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGCTGAGGGAGATGAATGACCCTGCTGGGAGATGCAACGCTGAA  550

seq1  TTATGACTCCACAGAGAAGAGAAAACCAGACTCCTGTAGGTTTGACTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTCCACAGAGAAGAGAAAACCAGACTCCTGTAGGTTTGACTAAT  600

seq1  TCTGCTCATCTTCTGTACTTTGCTCTATTGTTTAACTGTGTAATCTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCATCTTCTGTACTTTGCTCTATTGTTTAACTGTGTAATCTTGCC  650

seq1  TACCCCCAAGGATCAGAGTCTGAAATCTAAACCTCTCACTTTCTCCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCAAGGATCAGAGTCTGAAATCTAAACCTCTCACTTTCTCCTAAA  700

seq1  TCGGTGCCACAACACCAACCACCTGGGATGCTAACCATTACCTTGCACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCCACAACACCAACCACCTGGGATGCTAACCATTACCTTGCACTA  750

seq1  CAGCCACCTAGAGCCAAACTGCTGACTGCTATCAATAGACACATTTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACCTAGAGCCAAACTGCTGACTGCTATCAATAGACACATTTCCCT  800

seq1  ACAGCCTTCCTCAGTTTCAAACTAAGATTCTTGACATTGCCAAGGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTCCTCAGTTTCAAACTAAGATTCTTGACATTGCCAAGGTCTGA  850

seq1  GAGTTTTGCTGCCCACATTCGAATAGTCAGAAGTCCGCATGAATGAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGCTGCCCACATTCGAATAGTCAGAAGTCCGCATGAATGAAGAG  900

seq1  TTCACGTGTCTCTGTCCTCAAATTTTCACGCGTATAAGGTCCCTTACAGC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCACGTGTCTCTGTCCTCAAATTTTCACGCGTATAA-GTCCCTTACAGC  949

seq1  TCAGGACCTTGTTTTAGTT-GGTCTAGACAGCTGCAACACATTTCCTTCA  999
      ||| ||||||||||||||| |||||||||||||||||||||||||| |||
seq2  TCAAGACCTTGTTTTAGTTGGGTCTAGACAGCTGCAACACATTTCC-TCA  998

seq1  TGTTTCTTGCACCAAAGCAAGATGACATTATTAAAGAGGGGCTCT-GAGC  1048
      || |||||||||||||||||||||||||   |||||||||||||| ||||
seq2  TG-TTCTTGCACCAAAGCAAGATGACAT--ATAAAGAGGGGCTCTGGAGC  1045

seq1  AGCAAGTG-CCTCTGAAATGCCTTTCAGGACTTCTCTACCTCAGAAATGT  1097
      |||||||| |||||| ||||||||||| ||||||||||||||||||||||
seq2  AGCAAGTGCCCTCTG-AATGCCTTTCAAGACTTCTCTACCTCAGAAATGT  1094

seq1  TCATGCC  1104
      |||||||
seq2  TCATGCC  1101