BAC Information

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BAC

Clone NameB6Ng01-262K24
Chromosome13 (Build37)
Map Location 5,331,061 - 5,331,364
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262K24.bB6Ng01-262K24.g
ACCGA067036GA067037
length1,161596
definitionB6Ng01-262K24.b B6Ng01-262K24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacagttgattaaaaacttcagcaaagtgactggatataaaat
taattcaaataaatcagtagccttcctctactcaaaggataaacaggctt
agaaagaaattatggaaacaacacccttcacaatagtcacaaataataca
aaatatcttggagtgactcttaccaaacaagtgaaagtctatgtgacaag
agtttcaaatttctgaagaaagaaattgaagaagaccttagaagatggaa
agatctcctgtgcttttgtatcaacaggagtaacctaataaaaatggcta
tcttaacaaaagcaatctaaagattcaatgcaatccccatcaaaattctg
actcaattcttcacagagaaaggaagaaaatttctcaaattcatctagaa
taaaaaacaaacaaacaaacaaacaaacaggatagtgaaaacttaacaat
aaaagaacttctggggaaatcaccatccctgacctaaaggtctacaacag
agcaatagtgaaaaaaaaaaaaaaaactgcatagtatttgtacagagaca
gacaggtggatccatggaattaattgaaggctcagaaataagcccacaca
cctatagtcacttgaaatttgacaactaagtaaaaaatttacagtgggaa
aaaaaaagacagcaatttcaacaaatggtctacttcaactggcagttggc
aaccagaaacactgaatcaaatagaagagaaattgggaaagagccttgaa
tacatcagcacaagggataatttcctgaacagaacaccagtggctcaggc
tctaagattaacaattgccaaatgggacttcataaaatttaaaaacttct
gtaagaaagaggacactgtcagtaggacaaaagggcaacctatagattgg
gggaaaattttaccaaccctacatccaatataagactaatatccaaaata
tacaaaacctcaagaattagcctcgaaagaaccgatacattataaaaatg
tacagagctaaacaagatttcactgtgatttcgaaagccagagcactaaa
cacatctagtcatcagcatgcatcaaaccacctgagatctacctcatacc
agtcgatgcctagtcaactcaggtacgaatgctgcagatgtcgaagagat
tcccacacatg

gaattctaaggtagtctaggacatctcttaggcaccaacagacatgttca
tatatatggtttctgcattctccctcctctttttttattaggtattttcc
tcatctacaatttcctaaacacatgaaactcaagaagaatgaagactgaa
gtgtggacactatgtccctccttagaattgggaaaaaacacccatggaag
gagttacagagacaaagtttggagctgagacgaaaggatggaccatgtat
agactgccatatccagggatccaccccataatcagcatccaaacgctgac
accattgcatatactagcaagattttatcgaaaggacccagatgtagctg
tctcttgtgagactatgccggggcctagcaaacacagaagtggatgctca
cagtcagctaatggatggatcacagggctcccaatggaggagctagagaa
agtagccaaggagctaaagggatctgcaaccctataggtggaacaacatt
atgaactaaccagtaccccggagctcttgactctagctgcatatgtatca
aaagatggcctagtcggccatcactggaaagagaggcccattggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5331061_5331364
seq2: B6Ng01-262K24.g_273_659

seq1  AGACAAAGTTTGGAGCTGAGACAAAAGGGTGGACCATCTAGAAACTGCCA  50
      |||||||||||||||||||||| ||||| |||||||| || | |||||||
seq2  AGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATGTATAGACTGCCA  50

seq1  TATCTGGGGATCCATCCCATAATCAGCTTCCAAACGCTG-----------  89
      ||||  |||||||| |||||||||||| |||||||||||           
seq2  TATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCA  100

seq1  --------------------------------------------------  89
                                                        
seq2  TATACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTG  150

seq1  ----------------------ACACAGAAGTGGATGCTCACAGTCAGCT  117
                            ||||||||||||||||||||||||||||
seq2  AGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCT  200

seq1  ATTAGATGGATCACAGGGCCCCCGATGGAGGAGATAGAGAAAGTACCCAA  167
      | | ||||||||||||||| ||| ||||||||| ||||||||||| ||||
seq2  AATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAA  250

seq1  GGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACTACATTATGAACTAA  217
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAA  300

seq1  CCAGTACCCCGGAACTCTTGACTCTAGCTGCATATGTATCAAAAGATGGC  267
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGC  350

seq1  TTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGAC  304
       |||| |||||||||||||||||||||||||||||||
seq2  CTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGAC  387


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