BAC Information

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BAC

Clone NameB6Ng01-262N22
Chromosome13 (Build37)
Map Location 74,533,469 - 74,534,580
singlet/doubletsinglet
Overlap genenone
Upstream geneAytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670
Downstream geneLOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954, Pcsk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262N22.bB6Ng01-262N22.g
ACCGA067176GA067177
length1,1031,201
definitionB6Ng01-262N22.b B6Ng01-262N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaggtaggacacagtgtgtttgcaatcttcctgggtcacagt
gtatctaaagataaagatataaagaacagcataatttgctattatttgcc
tggcaccaaacaataacacttgccagatggcttctcagtaggattccaca
gacttccccaggtatgtatgcgcttcagaatctgtggtcctcttcttttt
tcattatttttggcctggactctccttgaaaatttaatagtgatagtagt
tctcaaatatcctaaacattgtggtgttaaataacatttttatacatatc
ctaatttaaaccaaattgctcctattctataaattctgtaagtttcttta
acttaacagaaggaggaaacactgaaattatggtttagagcacatatcat
gccagtttcagtggaaagttagataaagcacctgaaagctgagaagtttc
tgatgtggcaagaacttttatttgtgcgtgtgtgtctgtgtgtctctgtc
tgtctgtctgtctgtgtgtctgcatgtgagcatgcatttgttggaaagtt
tttatataatccttactttacatgctgtgaccgaccaaggtaaataaaag
ggatagatatattaaagccacggataattatatatatgacagagtcattc
tccagcattctcaacagatctgcatagaatcacatatcccaaagagaata
ttagttccgatcggcatttaaagttttcttcgaggctcctttttatggaa
ttcaggtcctctggtttgcatggccaccacaaatacctgagctacttttc
ttacctaatttgaagaaatggttgtatggcaatgtgtcttacattgctgt
acttagccttttcacttcttcaggtttctcacaatcttgtatttccatga
atccagcactggtgatgctatggcaagatgaatatgagtgggttggctct
gtagtcacctttgggaggatatctgtacttttagctggtgtacatggatc
tctcctacatttttaaactgaccacagttgtgatatagaaagagcagcag
ttatgatactcagaagaagagtcttctagggcccaacaacttaagagatg
aca
gaattcttatgaatgcaatcaatgtggtaaagcctttgcaagtcacagtc
atctccaagtacatgaaagaacacattttagaaaaaaaccttagaatgca
atcactgttgtaaagactttggatgtaagactaatctccaaagacataaa
agaacatatactggacagaaaccttatgaatgtaatcaatgtggtaaagc
atttgcaactcatagtcatctacaacgacataaaagaacacagaggagag
aaacctggttattgtttacatattgacataaggagatacaagtatgtatc
aaattgacaagggatggattgtgattgctactcttgcttttcaatataag
atctaaaatggaaagcataggtccaggcatggtggtacatgcccttgaac
cctaggagatgagcatcaagcagatctctgagttcaagtccatcctgata
cagaacaagtttcaggtaaagaaaagattaggtctaggcctgtggacact
gtgttccagagacagccagaattgtaccttgtgttgcagctgaacttggt
cacatgtaagaatcacccaggtgttactggttttgaaggcatgacagtgt
catgaggagcagtacagccttgcagatctctgagttcaaggtcaatatgt
agagcaagttccaggacagccaagctgaggcagtaaaggagttggagaac
agaaaactggtgataatgtaatagaagaggccatgtcccaggcccagaaa
gcagcagaactcagcagctttgttcatgtggctcttactttagaggtaag
actagaagggactactgggaaaattgaagcttgtaagctaaggctgagaa
attagaagtgatgatgaagagaccagcatcattgaggtgaaatcttctag
gaagtgtttctgagaggacataaaaaactgtgttccagagatagccagga
ttgtaccttgtgttgcagctgacttggtctcatgtagatcacccaggtgg
tactggttttgaatgcatgacgtgtcatgaggagcagctgagctgacatg
aaggagagcataaggtgaaggctatcagtgagcttagttgcaggaaagaa
acctaacatattgaagaatgcagtccaatgggattgagcgtatgaaacgg
ccaagtgatgggtatcatcaagagaccttagagtgtaatacagacacgac
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_74533469_74534580
seq2: B6Ng01-262N22.b_46_1148

seq1  GAATTCTTCAGGTAGGACACAGTGTGTTTGCAATCTTCCTGGGTCACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGTAGGACACAGTGTGTTTGCAATCTTCCTGGGTCACAGT  50

seq1  GTATCTAAAGATAAAGATATAAAGAACAGCATAATTTGCTATTATTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAAAGATAAAGATATAAAGAACAGCATAATTTGCTATTATTTGCC  100

seq1  TGGCACCAAACAATAACACTTGCCAGATGGCTTCTCAGTAGGATTCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCAAACAATAACACTTGCCAGATGGCTTCTCAGTAGGATTCCACA  150

seq1  GACTTCCCCAGGTATGTATGCGCTTCAGAATCTGTGGTCCTCTTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCCAGGTATGTATGCGCTTCAGAATCTGTGGTCCTCTTCTTTTT  200

seq1  TCATTATTTTTGGCCTGGACTCTCCTTGAAAATTTAATAGTGATAGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTTTGGCCTGGACTCTCCTTGAAAATTTAATAGTGATAGTAGT  250

seq1  TCTCAAATATCCTAAACATTGTGGTGTTAAATAACATTTTTATACATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATATCCTAAACATTGTGGTGTTAAATAACATTTTTATACATATC  300

seq1  CTAATTTAAACCAAATTGCTCCTATTCTATAAATTCTGTAAGTTTCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAAACCAAATTGCTCCTATTCTATAAATTCTGTAAGTTTCTTTA  350

seq1  ACTTAACAGAAGGAGGAAACACTGAAATTATGGTTTAGAGCACATATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACAGAAGGAGGAAACACTGAAATTATGGTTTAGAGCACATATCAT  400

seq1  GCCAGTTTCAGTGGAAAGTTAGATAAAGCACCTGAAAGCTGAGAAGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTTCAGTGGAAAGTTAGATAAAGCACCTGAAAGCTGAGAAGTTTC  450

seq1  TGATGTGGCAAGAACTTTTATTTGTGCGTGTGTGTCTGTGTGTCTCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGGCAAGAACTTTTATTTGTGCGTGTGTGTCTGTGTGTCTCTGTC  500

seq1  TGTCTGTCTGTCTGTGTGTCTGCATGTGAGCATGCATTTGTTGGAAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTGTGTCTGCATGTGAGCATGCATTTGTTGGAAAGTT  550

seq1  TTTATATAATCCTTACTTTACATGCTGTGACCGACCAAGGTAAATAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAATCCTTACTTTACATGCTGTGACCGACCAAGGTAAATAAAAG  600

seq1  GGATAGATATATTAAAGCCACGGATAATTATATATATGACAGAGTCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATATATTAAAGCCACGGATAATTATATATATGACAGAGTCATTC  650

seq1  TCCAGCATTCTCAACAGATCTGCATAGAATCACATATCCCAAAGAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCATTCTCAACAGATCTGCATAGAATCACATATCCCAAAGAGAATA  700

seq1  TTAGTTCCGATCGGCATTTAAAGTTTTCTTCGAGGCTCCTTTTTATGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCGATCGGCATTTAAAGTTTTCTTCGAGGCTCCTTTTTATGGAA  750

seq1  TTCAGGTCCTCTGGTTTGCATGGCCACCACAAATACCTGAGCTACTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCCTCTGGTTTGCATGGCCACCACAAATACCTGAGCTACTTTTC  800

seq1  TTACCTAATTTGAAGAAATGGTTGTATGGCAATGTGTCTTACATTGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTAATTTGAAGAAATGGTTGTATGGCAATGTGTCTTACATTGCTGT  850

seq1  ACTTAGCCTTTTCACTTCTTCAGGTTTCTCACAAATCTTGTATTTCCATG  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTTAGCCTTTTCACTTCTTCAGGTTTCTCAC-AATCTTGTATTTCCATG  899

seq1  AATCCAGCACTGGTGATGCTATGGCAAGATGAATATGAGTGGGTTGGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCACTGGTGATGCTATGGCAAGATGAATATGAGTGGGTTGGCTC  949

seq1  TGTAGTCACCTTTGGGAGGATATCTGTACTTTTAGCTGGTTGTACAATGG  1000
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TGTAGTCACCTTTGGGAGGATATCTGTACTTTTAGCTGG-TGTAC-ATGG  997

seq1  ATCTCTCCTACATTTTTAAACTGACCACAGTGGTGATATAGAAAGAGCAG  1050
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTCTCCTACATTTTTAAACTGACCACAGTTGTGATATAGAAAGAGCAG  1047

seq1  CAGTTATGATACCTCAG-AGAAGAGTCCTTCTAAGGGGCCAAAACAAAAC  1099
      ||||||||||| ||||| |||||||| ||||||  ||||| |   | |||
seq2  CAGTTATGATA-CTCAGAAGAAGAGT-CTTCTA--GGGCCCA---ACAAC  1090

seq1  TAAAGAGATGACA  1112
      | |||||||||||
seq2  TTAAGAGATGACA  1103