BAC Information

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BAC

Clone NameB6Ng01-262P14
Chromosome13 (Build37)
Map Location 44,090,011 - 44,309,723
singlet/doubletdoublet
Overlap geneA730030A06
Upstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432
Downstream geneEG637868, EG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262P14.bB6Ng01-262P14.g
ACCGA067256GA067257
length1,167611
definitionB6Ng01-262P14.b B6Ng01-262P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,308,571 - 44,309,723)(44,090,011 - 44,090,621)
sequence
gaattcatttagagttgtgttagaatcatttcatggtgtgttatggtttg
agtgtgaagaaactgctatattccatcaaattgtgaggcaaaacaaaccc
ctccccccttaaagtgacttccctgggggattttatagcaagggcaagaa
aagcagcccacacacatgggataagaggcggtgagacaggggtgttgacg
gggtcagttgcagaaaaaacaaggaggtttcatccttcttggctcctccc
tgctgtctccctatggccttttcagtcctttgcaagctgtagtcccaggc
acctcactgcttgggtatggttccactcaggtgaccaccccccccaactt
atgtaggttgaacaggaccctccagaagataagttgacatcctagctcct
agtacctcagaatgtgactttatatagacaaagggcattattcatataat
tacagatggtttccagtgtgatacttggacaatgattacaaatggctatt
cttctctttcggtttgaattcattcagtttcatgagatacaaagaagggg
cagactccgctgtagggtggcgtgcatattctgggtatgtctgaagcaaa
gatgctaaggtcagttgtgttcaatgtactttcacttacaatagatttac
tgagggtatagccccatcatcaagtagccaggatctgtctgtcgggtccc
accagaacgggattggcctctagttcaacagcaccggtgttcttgtaaag
ggagatagccatgtaaggacagagggccttgtgagagtggagacagagat
gaaagcaatttgccaaccattccagaggctgacaggagatgaaaccatgc
ctttatcttgatcttgggacagtgagtctgaagaatcatgagtatacatt
tctgctgttctaatccacccagctgtgctacttccttcaagctgcctttg
gcaaagaagcaccgttcccctactgctgtgttattaaggaagcataccag
tttcagaacttctcagcaagagttgtttggaaccctctccccccaccgcc
tttagtacacactgtaaagcagaagaactgtttgagtttctaccaagcac
aaaaatggctgaacaagttacttgtgaatggaaagacatcattgctattt
tgccgtgaactcgtcta
gaattcaggaactgtgggccctcccctcaggaacggggactcagagcctc
cagcaaacactactctaggtcgcaatgcaatggacccagagagaaatctc
ttgtcattgtagacagtacagtgactgagaaactctgagggtaaggtgtc
cccagacattgagaaaaacaaattaaatgggagagaagtaaggagaaaca
tggagatgttactcaccttccagataggccttgattgagtttgttgaggc
tacttactaaagtgtgggcaagggttaataatgctttaataactaaggaa
gaaatgaagacacaaccaggttctgtgatctcccaacatagtactcacgg
cccttctcattgccttaagaaaaacatgcaaagtatacttaccaggaaaa
aacaaataaactatgttgagcttatttcatattttcaaaattgaaaacaa
aaataagcttagctttggtttgacaccattctgcctccccacaaaccaag
agaaagtctagtatgatagcaaaagcctggtttaccatctgtgttaactt
tctgtcactgtgacaatacgcctgaaatatcagtgtgtgtgtgtgtgtgt
gtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44308571_44309723
seq2: B6Ng01-262P14.b_45_1211 (reverse)

seq1  TAGACGGAGTCACGGC-AAATAGCAAATGATGTCTTTCCA-TCACAAGTA  48
      ||||||   ||||||| ||||||| ||||||||||||||| |||||||| 
seq2  TAGACGAGTTCACGGCAAAATAGC-AATGATGTCTTTCCATTCACAAGT-  48

seq1  AACTTG-TCAGCCATATTTG---CTGGTAGAAACTCAAACAG-TCTTCTG  93
      |||||| |||||||| ||||    |||||||||||||||||| |||||||
seq2  AACTTGTTCAGCCATTTTTGTGCTTGGTAGAAACTCAAACAGTTCTTCTG  98

seq1  CTTTACAGTGTGTACTTAAAGCGGTGGGGGGAGAGGGTTCCAAAC-ACTC  142
      |||||||||||||||| || ||||||||||||||||||||||||| ||||
seq2  CTTTACAGTGTGTACTAAAGGCGGTGGGGGGAGAGGGTTCCAAACAACTC  148

seq1  -TGCTGAGAAG-TCTG-AACTGGT-TGCTTCCTT-ATAACACAGCAGT--  185
       |||||||||| |||| ||||||| ||||||||| |||||||||||||  
seq2  TTGCTGAGAAGTTCTGAAACTGGTATGCTTCCTTAATAACACAGCAGTAG  198

seq1  GGGGACGGTGCTTCTTTGCCAAGGGCAGCTTGAAGGAAGTAGCACAGCTG  235
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGGAACGGTGCTTCTTTGCCAAAGGCAGCTTGAAGGAAGTAGCACAGCTG  248

seq1  GGTGGATTAGAACAGCAGAAATGTATACTCATGATTCTTCAGACTCACTG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTAGAACAGCAGAAATGTATACTCATGATTCTTCAGACTCACTG  298

seq1  T-CCAAGATCAAGATAAAGGCATGGTTTCATCTCCTGTCAGCCTCTGGAA  334
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGATCAAGATAAAGGCATGGTTTCATCTCCTGTCAGCCTCTGGAA  348

seq1  TGGTTGGCAAATTGCTTTCATCTCTGTCTCCACTCTCACAAGGCCCTCTG  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGCAAATTGCTTTCATCTCTGTCTCCACTCTCACAAGGCCCTCTG  398

seq1  TCCTTACATGGCTATCTCCCTTTACAAGAACACCGGTGCTGTTGAACTAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATGGCTATCTCCCTTTACAAGAACACCGGTGCTGTTGAACTAG  448

seq1  AGGCCAATCCCGTTCTGGTGGGACCCGACAGACAGATCCTGGCTACTTGA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAATCCCGTTCTGGTGGGACCCGACAGACAGATCCTGGCTACTTGA  498

seq1  TGATGGGGCTATACCCTCAGTAAATCTATTGTAAGTGAAAGTACATTGAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGCTATACCCTCAGTAAATCTATTGTAAGTGAAAGTACATTGAA  548

seq1  CACAACTGACCTTAGCATCTTTGCTTCAGACATACCCAGAATATGCACGC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTGACCTTAGCATCTTTGCTTCAGACATACCCAGAATATGCACGC  598

seq1  CACCCTACAGCGGAGTCTGCCCCTTCTTTGTATCTCATGAAACTGAATGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTACAGCGGAGTCTGCCCCTTCTTTGTATCTCATGAAACTGAATGA  648

seq1  ATTCAAACCGAAAGAGAAGAATAGCCATTTGTAATCATTGTCCAAGTATC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACCGAAAGAGAAGAATAGCCATTTGTAATCATTGTCCAAGTATC  698

seq1  ACACTGGAAACCATCTGTAATTATATGAATAATGCCCTTTGTCTATATAA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGAAACCATCTGTAATTATATGAATAATGCCCTTTGTCTATATAA  748

seq1  AGTCACATTCTGAGGTACTAGGAGCTAGGATGTCAACTTATCTTCTGGAG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATTCTGAGGTACTAGGAGCTAGGATGTCAACTTATCTTCTGGAG  798

seq1  GGTCCTGTTCAACCTACATAAGTTGGGGGGGGTGGTCACCTGAGTGGAAC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGTTCAACCTACATAAGTTGGGGGGGGTGGTCACCTGAGTGGAAC  848

seq1  CATACCCAAGCAGTGAGGTGCCTGGGACTACAGCTTGCAAAGGACTGAAA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCAAGCAGTGAGGTGCCTGGGACTACAGCTTGCAAAGGACTGAAA  898

seq1  AGGCCATAGGGAGACAGCAGGGAGGAGCCAAGAAGGATGAAACCTCCTTG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATAGGGAGACAGCAGGGAGGAGCCAAGAAGGATGAAACCTCCTTG  948

seq1  TTTTTTCTGCAACTGACCCCGTCAACACCCCTGTCTCACCGCCTCTTATC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTGCAACTGACCCCGTCAACACCCCTGTCTCACCGCCTCTTATC  998

seq1  CCATGTGTGTGGGCTGCTTTTCTTGCCCTTGCTATAAAATCCCCCAGGGA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTGTGGGCTGCTTTTCTTGCCCTTGCTATAAAATCCCCCAGGGA  1048

seq1  AGTCACTTTAAGGGGGGAGGGGTTTGTTTTGCCTCACAATTTGATGGAAT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTAAGGGGGGAGGGGTTTGTTTTGCCTCACAATTTGATGGAAT  1098

seq1  ATAGCAGTTTCTTCACACTCAAACCATAACACACCATGAAATGATTCTAA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGTTTCTTCACACTCAAACCATAACACACCATGAAATGATTCTAA  1148

seq1  CACAACTCTAAATGAATTC  1153
      |||||||||||||||||||
seq2  CACAACTCTAAATGAATTC  1167

seq1: chr13_44090011_44090621
seq2: B6Ng01-262P14.g_67_677

seq1  GAATTCAGGAACTGTGGGCCCTCCCCTCAGGAACGGGGACTCAGAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAACTGTGGGCCCTCCCCTCAGGAACGGGGACTCAGAGCCTC  50

seq1  CAGCAAACACTACTCTAGGTCGCAATGCAATGGACCCAGAGAGAAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAACACTACTCTAGGTCGCAATGCAATGGACCCAGAGAGAAATCTC  100

seq1  TTGTCATTGTAGACAGTACAGTGACTGAGAAACTCTGAGGGTAAGGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGTAGACAGTACAGTGACTGAGAAACTCTGAGGGTAAGGTGTC  150

seq1  CCCAGACATTGAGAAAAACAAATTAAATGGGAGAGAAGTAAGGAGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACATTGAGAAAAACAAATTAAATGGGAGAGAAGTAAGGAGAAACA  200

seq1  TGGAGATGTTACTCACCTTCCAGATAGGCCTTGATTGAGTTTGTTGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGTTACTCACCTTCCAGATAGGCCTTGATTGAGTTTGTTGAGGC  250

seq1  TACTTACTAAAGTGTGGGCAAGGGTTAATAATGCTTTAATAACTAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTAAAGTGTGGGCAAGGGTTAATAATGCTTTAATAACTAAGGAA  300

seq1  GAAATGAAGACACAACCAGGTTCTGTGATCTCCCAACATAGTACTCACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAGACACAACCAGGTTCTGTGATCTCCCAACATAGTACTCACGG  350

seq1  CCCTTCTCATTGCCTTAAGAAAAACATGCAAAGTATACTTACCAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCATTGCCTTAAGAAAAACATGCAAAGTATACTTACCAGGAAAA  400

seq1  AACAAATAAACTATGTTGAGCTTATTTCATATTTTCAAAATTGAAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAACTATGTTGAGCTTATTTCATATTTTCAAAATTGAAAACAA  450

seq1  AAATAAGCTTAGCTTTGGTTTGACACCATTCTGCCTCCCCACAAACCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTTAGCTTTGGTTTGACACCATTCTGCCTCCCCACAAACCAAG  500

seq1  AGAAAGTCTAGTATGATAGCAAAAGCCTGGTTTACCATCTGTGTTAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCTAGTATGATAGCAAAAGCCTGGTTTACCATCTGTGTTAACTT  550

seq1  TCTGTCACTGTGACAATACGCCTGAAATATCAGTGTGTGTGTGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACTGTGACAATACGCCTGAAATATCAGTGTGTGTGTGTGTGTGT  600

seq1  GTGTGTGTGTG  611
      |||||||||||
seq2  GTGTGTGTGTG  611