BAC Information

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BAC

Clone NameB6Ng01-263C14
Chromosome13 (Build37)
Map Location 106,269,687 - 106,270,826
singlet/doubletsinglet
Overlap genenone
Upstream geneAdamts6, Sdccag10, 3110031B13Rik, A930021C24Rik, EG238836, Rgs7bp, 4933425L06Rik, LOC100040646, LOC100040656, Rnf180, Htr1a
Downstream geneEG668025, Olfr717-ps1, LOC631097
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263C14.bB6Ng01-263C14.g
ACCGA067398GA067399
length2331,125
definitionB6Ng01-263C14.b B6Ng01-263C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cattgtctggcatcaataggaggagaggcccttggtcctgtaaaggctca
attccccaggattccccagtgtaggggaatgccagggaagtgaggtggga
gtgggtgggtggtagggaaagcactcacatacaaggagggagaggacaga
tgggatgaggaattctggaaaccataaaaggtgaaacctggaaagggaat
aacatgttgaaatgcctttactttaaatatcct

gaattcatacaggaggttagtttgagatttgttggtgctgtagttactct
tttgtaccatgggcttcccatgttaaggacagcacaggttttccttttta
ttcccacaagtttgctgagcccttggctttgggttttcttggtaagtgtg
cttcgcctcacatattctgtgtcttccctcttgtaactattaagctaacc
tttctctggctttatcaggaaatattatttcttagtaatgttcttttgta
agcttcctgaggactatgtgtaataaccttgcaatagagtgcatgccccc
catatgtggttcttgtgagttctatagagttttgccaccttagactctgc
cttcaacagtatatgaaatattccagctgacttcgtatggggtctggctt
tcttgtctctaggtgaaaagatgtttatggtctctctttctttgtcctgt
ttgccactgtctccataggctagctctctgccctgtgattttatctctgg
attccagaaaggtgttcacaatttccctttcttctttcttggtgtctcaa
gagtggcacaatattctttccagatgcttccatattcatgtgagagtgga
gtctctctcccatttgatcccaccttcatggagtggtatccaacattgtt
tactctggccttcaatttacagccaagcaagagaacaacatgatcaatct
gttggctacatttgctgtatatgttgggtttggcctcctgaagttagaag
ctggcatcttgtgtagaacaagacacttgaaatgtgtagatctcttgtgt
agaaaattctaggatccaaaaatgcatgtaccatctaaatgggctttcta
gcataatacacaggtaggttagtgactgaatattgcttattgggataggg
gaaaaaagtgttactgtagcagctgatggtattgtttatctgtggaagtt
tcagtagatagggatcatcattccaggcagctcataaaaaatggatgatt
aaattgagcttactgagcatatattcatagcttaaaatgactataactcg
gttcaagttcattatgctttctaactgtcaaaacaataggatttgatagt
gctagaacaagaattgcactgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_106269687_106270826
seq2: B6Ng01-263C14.g_68_1192

seq1  GAATTCATACAGGAGGTTAGTTTGAGATTTGTTGGTGCTGTAGTTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACAGGAGGTTAGTTTGAGATTTGTTGGTGCTGTAGTTACTCT  50

seq1  TTTGTACCATGGGCTTCCCATGTTAAGGACAGCACAGGTTTTCCTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCATGGGCTTCCCATGTTAAGGACAGCACAGGTTTTCCTTTTTA  100

seq1  TTCCCACAAGTTTGCTGAGCCCTTGGCTTTGGGTTTTCTTGGTAAGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAAGTTTGCTGAGCCCTTGGCTTTGGGTTTTCTTGGTAAGTGTG  150

seq1  CTTCGCCTCACATATTCTGTGTCTTCCCTCTTGTAACTATTAAGCTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCCTCACATATTCTGTGTCTTCCCTCTTGTAACTATTAAGCTAACC  200

seq1  TTTCTCTGGCTTTATCAGGAAATATTATTTCTTAGTAATGTTCTTTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGGCTTTATCAGGAAATATTATTTCTTAGTAATGTTCTTTTGTA  250

seq1  AGCTTCCTGAGGACTATGTGTAATAACCTTGCAATAGAGTGCATGCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTGAGGACTATGTGTAATAACCTTGCAATAGAGTGCATGCCCCC  300

seq1  CATATGTGGTTCTTGTGAGTTCTATAGAGTTTTGCCACCTTAGACTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGGTTCTTGTGAGTTCTATAGAGTTTTGCCACCTTAGACTCTGC  350

seq1  CTTCAACAGTATATGAAATATTCCAGCTGACTTCGTATGGGGTCTGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACAGTATATGAAATATTCCAGCTGACTTCGTATGGGGTCTGGCTT  400

seq1  TCTTGTCTCTAGGTGAAAAGATGTTTATGGTCTCTCTTTCTTTGTCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTCTAGGTGAAAAGATGTTTATGGTCTCTCTTTCTTTGTCCTGT  450

seq1  TTGCCACTGTCTCCATAGGCTAGCTCTCTGCCCTGTGATTTTATCTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTGTCTCCATAGGCTAGCTCTCTGCCCTGTGATTTTATCTCTGG  500

seq1  ATTCCAGAAAGGTGTTCACAATTTCCCTTTCTTCTTTCTTGGTGTCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAAAGGTGTTCACAATTTCCCTTTCTTCTTTCTTGGTGTCTCAA  550

seq1  GAGTGGCACAATATTCTTTCCAGATGCTTCCATATTCATGTGAGAGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCACAATATTCTTTCCAGATGCTTCCATATTCATGTGAGAGTGGA  600

seq1  GTCTCTCTCCCATTTGATCCCACCTTCATGGAGTGGTATCCAACATTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCCCATTTGATCCCACCTTCATGGAGTGGTATCCAACATTGTT  650

seq1  TACTCTGGCCTTCAATTTACAGCCAAGCAAGAGAACAACATGATCAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGGCCTTCAATTTACAGCCAAGCAAGAGAACAACATGATCAATCT  700

seq1  GTTGGCTACATTTGCTGTATATGTTGGGTTTGGCCTCCTGAAGTTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTACATTTGCTGTATATGTTGGGTTTGGCCTCCTGAAGTTAGAAG  750

seq1  CTGGCATCTTGTGTAGAACAAGACACTTGAAATGTGTAGATCTCTTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATCTTGTGTAGAACAAGACACTTGAAATGTGTAGATCTCTTGTGT  800

seq1  AGAAAATTCTAGGATCCAAAAATGCATGTACCATCTAAATGGGCTTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCTAGGATCCAAAAATGCATGTACCATCTAAATGGGCTTTCTA  850

seq1  GCATAATACACAGGTAGGTTAGTGACTGAATATTGCTTATT-GGATAGGG  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCATAATACACAGGTAGGTTAGTGACTGAATATTGCTTATTGGGATAGGG  900

seq1  GAAAAAAGTGTTACTGTAGCAGCTGATGGTATTGTTTATCTGTGGAAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTGTTACTGTAGCAGCTGATGGTATTGTTTATCTGTGGAAGTT  950

seq1  TCAGTAGATAGGGATCATCATTCCAGGCAGCTCATAAAAAATGGATGATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGATAGGGATCATCATTCCAGGCAGCTCATAAAAAATGGATGATT  1000

seq1  AAATTGAGGCTTACTGAAGGCATTAATATTCATAAGCTTAAAAATTGACT  1049
      ||||||| |||||||||  ||||  |||||||| |||||||||  |||||
seq2  AAATTGA-GCTTACTGA--GCAT--ATATTCAT-AGCTTAAAA--TGACT  1042

seq1  ATAAACTCGGTTCAAAGTTCATTAATGCTTTCTAACTGGTTCAAAACAAA  1099
      || |||||||||| ||||||||| ||||||||||||||  ||||||| ||
seq2  AT-AACTCGGTTC-AAGTTCATT-ATGCTTTCTAACTG--TCAAAAC-AA  1086

seq1  TAGGATTTGATAGTGCCTAGAACAAGAATTTTCACTGCAGA  1140
      ||||||||||||||| |||||||||||| || |||||||||
seq2  TAGGATTTGATAGTG-CTAGAACAAGAA-TTGCACTGCAGA  1125


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