BAC Information

Click to search

BAC

Clone NameB6Ng01-263C18
Chromosome13 (Build37)
Map Location 76,445,172 - 76,446,322
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276
Downstream geneMctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263C18.bB6Ng01-263C18.g
ACCGA067406GA067407
length6521,159
definitionB6Ng01-263C18.b B6Ng01-263C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattccttggcaaatggatggacctggagggcatcatcct
gagtgaggtaactgaatcacaaaagaactcacatgatatgtactctctga
taagtggatattagcccagaaacttagaatacccactatatatgatacaa
tttgagaaacacatgaaaatcaagaagaaagaagaccaaagtgtggacac
tttgccccttcttagaattgggaacaaaacacccatggaaggagttacag
aaacaaagttatgagctgagacaaaaggatggaccatctagagtctgcca
tatctggggatctatcccataatcagtctccaaaagctgacaccattgca
tacactagcaagattttgctaagaggacccagatatagctgtctcttgtg
agactatgccggggcctagcaaacacagaagtggatcctcacagtcagct
attggatggatcacagggcccccagtggaggagctagagaaagtactcaa
ggagctaaccagtacccccctggagctcgtgtctctaactgtatatgtat
cagaagatggcctagtcggcaatcagtggagagagtggcccattggtcat
gcaaactttatatgcgtcagtacaggggaacgccagggccaagaagtggg
ag
gaattcagaatttagtgagcacagagccacagtgctctcatactgattct
gattctggtccccctagaacacaagggacactgtaaatactcagtttcta
ctagaggaacacacatgttgggctaattcacttggtgtttgagtactgtg
acagccattatttcttgatacactccaaatacatacattaaaattactat
cttatatctcaaaaggacaaagaacttaatatcaaaaaacctacaaagaa
cataattggagaaacaggaccagtgcttccagttgaatagctaacttaaa
gtacacacacttaccttgatttgttaatttattcattccctcaagtgtta
atgaaacatcgagtctcagagatggatgaatctacactcaggtcagtggc
aggtcagattcttgtgctcagacagggttctcaggcctctcttgggctga
tagctgggctgcctcttgtatgttgctttattccagccagatcattcttc
atggtgcctacatttccctagtatgctcatagctccaagtccagggagca
ggagcaaaggtcactcttatttctcctgaaaattttttgagtgagataga
accagatcagcttgagtcatatgctcatatccatcagaatgttacaggca
ggcaacaagacaggttgcagtcacacccagaagcagtttcaccaaggaac
tgtgcattgtctagaaaggagatgggatccatgagtccacaagagtggaa
aacctgtggtacaactaaactacaggagcttaagtgtagcaaggattctg
cctaacttctcagaagcatttgtaacagtcactagagaagcattggtgca
caacgaagcagtctgaaagattaaagacaagtgaagataatcaggcatac
aacataactcaaataaatgagcttttatttatatgtagatgtcaccttct
ccaagtccagcaacttactagtttagaatgggagctctctttattagttc
tcaaatagaaaaaaaatgaagataaattggggctacttaatttttttaat
ttttctatctcttcataatatttttaatgtactattggccatcatccaca
tgagccaatgcctagagacagtcagcactagtacctgtccggaactgtga
gctttcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76445172_76446322
seq2: B6Ng01-263C18.g_67_1225 (reverse)

seq1  GAAG-AAGCTCACAGCTCC-GACA-GTACTAAGTGCTGACTGTCTCTAAG  47
      |||| |||||||||| ||| |||| ||||| ||||||||||||||||| |
seq2  GAAGAAAGCTCACAGTTCCGGACAGGTACT-AGTGCTGACTGTCTCTAGG  49

seq1  CATTTGCTCATGTGGATGAT-GCCAATAGTACAT--AAAATATTATGAA-  93
      |||| ||||||||||||||| |||||||||||||  ||||||||||||| 
seq2  CATTGGCTCATGTGGATGATGGCCAATAGTACATTAAAAATATTATGAAG  99

seq1  AGATAGAAAAA-TAAAAAAATTAAGTAGCCCAAATTTATC-TCATTTTTT  141
      ||||||||||| ||||||||||||||||||| |||||||| |||||||||
seq2  AGATAGAAAAATTAAAAAAATTAAGTAGCCCCAATTTATCTTCATTTTTT  149

seq1  TTCTATTTGAG-ACTAATAAAGAGAGCTCCCATTCTAAACTAGTAAGTTT  190
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  TTCTATTTGAGAACTAATAAAGAGAGCTCCCATTCTAAACTAGTAAG-TT  198

seq1  GCTGGACTTGGAGAAGGTGACATCTACATATAAATAAAAGCTCATTTATT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACTTGGAGAAGGTGACATCTACATATAAATAAAAGCTCATTTATT  248

seq1  TGAGTTATGTTGTATGCCTGATTATCTTCACTTGTCTTTAATC-TTCAGA  289
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGAGTTATGTTGTATGCCTGATTATCTTCACTTGTCTTTAATCTTTCAGA  298

seq1  CTGCTTCGTTGTGCACCAATGCTTCTCTAGTGACTTGTTACAAATGCTTC  339
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGCTTCGTTGTGCACCAATGCTTCTCTAGTGAC-TGTTACAAATGCTTC  347

seq1  TGAGAAGTTAGGCAGAATCCTTGCTACACTTAAGCTCCTGTAGTTTAGTT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTTAGGCAGAATCCTTGCTACACTTAAGCTCCTGTAGTTTAGTT  397

seq1  GTACCACAGGTTTTCCACTCTTGTGGACTCATGGATCCCATCTCCTTTCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACAGGTTTTCCACTCTTGTGGACTCATGGATCCCATCTCCTTTCT  447

seq1  AGACAATGCACAGTTCCTTGGTGAAACTGCTTCTGGGTGTGACTGCAACC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGCACAGTTCCTTGGTGAAACTGCTTCTGGGTGTGACTGCAACC  497

seq1  TGTCTTGTTGCCTGCCTGTAACATTCTGATGGATATGAGCATATGACTCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGTTGCCTGCCTGTAACATTCTGATGGATATGAGCATATGACTCA  547

seq1  AGCTGATCTGGTTCTATCTCACTCAAAAAATTTTCAGGAGAAATAAGAGT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATCTGGTTCTATCTCACTCAAAAAATTTTCAGGAGAAATAAGAGT  597

seq1  GACCTTTGCTCCTGCTCCCTGGACTTGGAGCTATGAGCATACTAGGGAAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTGCTCCTGCTCCCTGGACTTGGAGCTATGAGCATACTAGGGAAA  647

seq1  TGTAGGCACCATGAAGAATGATCTGGCTGGAATAAAGCAACATACAAGAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCACCATGAAGAATGATCTGGCTGGAATAAAGCAACATACAAGAG  697

seq1  GCAGCCCAGCTATCAGCCCAAGAGAGGCCTGAGAACCCTGTCTGAGCACA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCAGCTATCAGCCCAAGAGAGGCCTGAGAACCCTGTCTGAGCACA  747

seq1  AGAATCTGACCTGCCACTGACCTGAGTGTAGATTCATCCATCTCTGAGAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGACCTGCCACTGACCTGAGTGTAGATTCATCCATCTCTGAGAC  797

seq1  TCGATGTTTCATTAACACTTGAGGGAATGAATAAATTAACAAATCAAGGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGTTTCATTAACACTTGAGGGAATGAATAAATTAACAAATCAAGGT  847

seq1  AAGTGTGTGTACTTTAAGTTAGCTATTCAACTGGAAGCACTGGTCCTGTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTGTACTTTAAGTTAGCTATTCAACTGGAAGCACTGGTCCTGTT  897

seq1  TCTCCAATTATGTTCTTTGTAGGTTTTTTGATATTAAGTTCTTTGTCCTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATTATGTTCTTTGTAGGTTTTTTGATATTAAGTTCTTTGTCCTT  947

seq1  TTGAGATATAAGATAGTAATTTTAATGTATGTATTTGGAGTGTATCAAGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATATAAGATAGTAATTTTAATGTATGTATTTGGAGTGTATCAAGA  997

seq1  AATAATGGCTGTCACAGTACTCAAACACCAAGTGAATTAGCCCAACATGT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGCTGTCACAGTACTCAAACACCAAGTGAATTAGCCCAACATGT  1047

seq1  GTGTTCCTCTAGTAGAAACTGAGTATTTACAGTGTCCCTTGTGTTCTAGG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTCTAGTAGAAACTGAGTATTTACAGTGTCCCTTGTGTTCTAGG  1097

seq1  GGGACCAGAATCAGAATCAGTATGAGAGCACTGTGGCTCTGTGCTCACTA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAGAATCAGAATCAGTATGAGAGCACTGTGGCTCTGTGCTCACTA  1147

seq1  AATTCTGAATTC  1151
      ||||||||||||
seq2  AATTCTGAATTC  1159