BAC Information

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BAC

Clone NameB6Ng01-263H01
Chromosome13 (Build37)
Map Location 6,520,448 - 6,521,053
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
Downstream genePitrm1, Pfkp, LOC100039532, LOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263H01.bB6Ng01-263H01.g
ACCGA067608GA067609
length1,236607
definitionB6Ng01-263H01.b B6Ng01-263H01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgtctctccaaagcaaacactgtcttcattagatcaagaggaa
cactttggcctaagtaataatgattatgaaaaaataatgcgacataccac
cacaccattaatctgaaatcattttctgttccagtttgagttcttcttga
gataaaatgttctgaccagagcaacaccgttaggaaagggctcacttaat
cttactcttcaaagtcacaatccatccattgagggtcgtcagagcaggaa
gttggggcaggaacctggagcagaaatcatggagggataatgcttactgg
ctcactcagctagttatcttaaatagccaaaacctaccttatagagagct
tgttgcccacagtgggctagaccctcccataccagtgacaaggtagctta
taaactagttcatgtaaattgtgtgtgtttaaatgtttgtggttgccttc
cgctcgactcgagccccgggctaccttgccagcagagtcttgcccaacac
ccgcaagggcccacacgggactccccacgggatcctaagacctctggtga
gtggaacacagcgcctgccccaatccaatcgcgcagaacctgagactgcg
atacatagggaagcaggctacctgggcttgatctggggcacaaacccctt
ccgctccactcgagccccgggctaccttgccagcagagtcgcctgacacc
cgcaagggcccacacaggattccccacgggatcctaagacctctagtgag
tggaacacaacttctgccaggagtctggttcgaacaccagatatctgggt
acctgccctgcaagaagagagcttgcctgcagagaatactctgtccactg
aaactaaggagagtgctaccctccaggtctgcttatagaggctaacagag
tcacctgaagaacaagctcttaacagtgacaactaaaacagctagcttca
gagattaccagatggcaaaaggcaaacgttaagaatcctactaacagaaa
tcaagaccacctcaccatcatcagaacgcagcactccaccccacttagtc
tgggcacccaaaccaatcgaaaatctagaccagaattaaacatttctcat
gatgatgattagagggacattcaggaggactttcataagttcactaaaga
attaaggggaaatcactggctaagagttacagctctaaggaaaggcaggg
gataaacctacagcgtctaatcaggtgtgtagagca
gaattcccaattagcttctgtgcttacagtaaccactggggattgaaatg
tgttgctgtcctgaggaaggagtattctgcttcctcttgctgcatcttgc
cttcatgctcggaacaattaaggtctactgtacctttatgctatactgag
gtttggagcgataaaagatctaggagacaggtccgaaatttgcgccatta
agtcaagctcgtgttacttcatttcacccagcgcccagggctctgataga
acagcacaatgcgccttcctgaatcacagtggagctcatggctgggcttt
taaagctgtgccttctactagtagcattaaaataaaactcaatgaaatag
atctctctcagaatcttcatagcatatcattgctacatttggtttctttg
tgttattatggggccagatagataaggaaactcctgttagcagacataaa
atcagaagagtgagtcatcatcagccttcctgaacatcctgtctgtctgt
ctgtctgtctgtctgtctgtctgtctgtctgtctgactatctgccccatg
caggaggtattcctgggtggcttgaatataaaatgtccctcaagggttca
tgtgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6520448_6521053
seq2: B6Ng01-263H01.g_68_674

seq1  GAATTCCCAATTAGCTTCTGTGCTTACAGTAACCACTGGGGATTGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAATTAGCTTCTGTGCTTACAGTAACCACTGGGGATTGAAATG  50

seq1  TGTTGCTGTCCTGAGGAAGGAGTATTCTGCTTCCTCTTGCTGCATCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGTCCTGAGGAAGGAGTATTCTGCTTCCTCTTGCTGCATCTTGC  100

seq1  CTTCATGCTCGGAACAATTAAGGTCTACTGTACCTTTATGCTATACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGCTCGGAACAATTAAGGTCTACTGTACCTTTATGCTATACTGAG  150

seq1  GTTTGGAGCGATAAAAGATCTAGGAGACAGGTCCGAAATTTGCGCCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAGCGATAAAAGATCTAGGAGACAGGTCCGAAATTTGCGCCATTA  200

seq1  AGTCAAGCTCGTGTTACTTCATTTCACCCAGCGCCCAGGGCTCTGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGCTCGTGTTACTTCATTTCACCCAGCGCCCAGGGCTCTGATAGA  250

seq1  ACAGCACAATGCGCCTTCCTGAATCACAGTGGAGCTCATGGCTGGGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAATGCGCCTTCCTGAATCACAGTGGAGCTCATGGCTGGGCTTT  300

seq1  TAAAGCTGTGCCTTCTACTAGTAGCATTAAAATAAAACTCAATGAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGTGCCTTCTACTAGTAGCATTAAAATAAAACTCAATGAAATAG  350

seq1  ATCTCTCTCAGAATCTTCATAGCATATCATTGCTACATTTGGTTTCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTCAGAATCTTCATAGCATATCATTGCTACATTTGGTTTCTTTG  400

seq1  TGTTATTATGGGGCCAGATAGATAAGGAAACTCCTGTTAGCAGACATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTATGGGGCCAGATAGATAAGGAAACTCCTGTTAGCAGACATAAA  450

seq1  ATCAGAAGAGTGAGTCATCATCAGCCTTCCTGAACATCCTGTCTGTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGAGTGAGTCATCATCAGCCTTCCTGAACATCCTGTCTGTCTGT  500

seq1  CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGACTATCTGCCCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGACTATCTGCCCCATG  550

seq1  CAGGAGGTATTCCT-GGTGGCTTGAATATAAAATGTCCCTCAAGGGTTCA  599
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTATTCCTGGGTGGCTTGAATATAAAATGTCCCTCAAGGGTTCA  600

seq1  TGTGTTT  606
      |||||||
seq2  TGTGTTT  607