BAC Information

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BAC

Clone NameB6Ng01-265P03
Chromosome13 (Build37)
Map Location 77,624,313 - 77,774,155
singlet/doubletdoublet
Overlap geneLOC675063
Upstream geneMctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
Downstream geneD13Mgi7, 1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P03.bB6Ng01-265P03.g
ACCGA069463GA069464
length1,017179
definitionB6Ng01-265P03.b B6Ng01-265P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,773,431 - 77,774,155)(77,624,313 - 77,624,491)
sequence
gaattcacatccccaggtgataagaaagggaaatatcacttaaaacttat
tccagggtgcagttctagtgagaaacctgcttgctgttaacatggtcccc
tcaaaattgatctaccaaagtctaagcaagcccccaattaaatgatttct
tataataataagttgccttatcataacaactttttcacagcaataggaca
ataaataagacaatgccttaaaatgtatttttcaaatacaaagcacatat
ttcctcttattatgtagaacaatgctgcatttgctgtttttatagttttc
tgctcaaattaaaaaactttatgtatcatgctaaggattgtcaacatata
ttcaggggcatattctatttaaggagtgttaatactctaatattaaattt
actaaataaaaatatactaaccagttttaataaattcagttgtattaact
atattcatcattgtaaatcaatctctaaaactgtttcaacttacaaattt
ggaattccccactcattaagaacaagccccccattctcctccccctgcta
ggaatcactactctttttgttttatgagcctgaatattttaaaaaactca
tataagtggaataacacaacatttatttttaaaattttgttttatatgta
tggatgttttgcttgcacgtatgtatgtataccatgtgcatgcagtggtc
atgaggaatatcagagccccttggactgaagttacagagggttgtgatct
gccatatggggcttgggggtcaaatcctggtcctctgtaagaacatcaag
ggctgttgaccactcagacatctttccagttccaaactacttaaattcat
ggtttatcgatatttttgcctttagcacactccttgtgaagtttatctgt
attgttgtatgtgacaggaatttacttccttttaaaaagatattttgtat
gttaaaattgtccaagaacaaaggaagttagaaaagctgctgacaatctt
gtgtcccgggttcctca

aaggccagtctgggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtccagagagagggagttggggggaggaagcaaatggggtaaatttac
tggcctgtattttgtatttaatcaagtgacttttcatatttggcatatga
gggagagctgagctctgacctaccgttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77773431_77774155
seq2: B6Ng01-265P03.b_47_771 (reverse)

seq1  TCCAAGGGGCTCTGATATTCCTCATGACCACTGCATGCACATGGTATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGGCTCTGATATTCCTCATGACCACTGCATGCACATGGTATACA  50

seq1  TACATACGTGCAAGCAAAACATCCATACATATAAAACAAAATTTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACGTGCAAGCAAAACATCCATACATATAAAACAAAATTTTAAAAA  100

seq1  TAAATGTTGTGTTATTCCACTTATATGAGTTTTTTAAAATATTCAGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGTGTTATTCCACTTATATGAGTTTTTTAAAATATTCAGGCTC  150

seq1  ATAAAACAAAAAGAGTAGTGATTCCTAGCAGGGGGAGGAGAATGGGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAAAAAGAGTAGTGATTCCTAGCAGGGGGAGGAGAATGGGGGGC  200

seq1  TTGTTCTTAATGAGTGGGGAATTCCAAATTTGTAAGTTGAAACAGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTAATGAGTGGGGAATTCCAAATTTGTAAGTTGAAACAGTTTTA  250

seq1  GAGATTGATTTACAATGATGAATATAGTTAATACAACTGAATTTATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGATTTACAATGATGAATATAGTTAATACAACTGAATTTATTAAA  300

seq1  ACTGGTTAGTATATTTTTATTTAGTAAATTTAATATTAGAGTATTAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTATATTTTTATTTAGTAAATTTAATATTAGAGTATTAACAC  350

seq1  TCCTTAAATAGAATATGCCCCTGAATATATGTTGACAATCCTTAGCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAATAGAATATGCCCCTGAATATATGTTGACAATCCTTAGCATGA  400

seq1  TACATAAAGTTTTTTAATTTGAGCAGAAAACTATAAAAACAGCAAATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAGTTTTTTAATTTGAGCAGAAAACTATAAAAACAGCAAATGCA  450

seq1  GCATTGTTCTACATAATAAGAGGAAATATGTGCTTTGTATTTGAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTCTACATAATAAGAGGAAATATGTGCTTTGTATTTGAAAAATA  500

seq1  CATTTTAAGGCATTGTCTTATTTATTGTCCTATTGCTGTGAAAAAGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGGCATTGTCTTATTTATTGTCCTATTGCTGTGAAAAAGTTGT  550

seq1  TATGATAAGGCAACTTATTATTATAAGAAATCATTTAATTGGGGGCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAGGCAACTTATTATTATAAGAAATCATTTAATTGGGGGCTTGC  600

seq1  TTAGACTTTGGTAGATCAATTTTGAGGGGACCATGTTAACAGCAAGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTTGGTAGATCAATTTTGAGGGGACCATGTTAACAGCAAGCAGG  650

seq1  TTTCTCACTAGAACTGCACCCTGGAATAAGTTTTAAGTGATATTTCCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTAGAACTGCACCCTGGAATAAGTTTTAAGTGATATTTCCCTT  700

seq1  TCTTATCACCTGGGGATGTGAATTC  725
      |||||||||||||||||||||||||
seq2  TCTTATCACCTGGGGATGTGAATTC  725


seq1: chr13_77624313_77624491
seq2: B6Ng01-265P03.g_72_250

seq1  AAGGCCAGTCTGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGTCTGGGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGTCCAGAGAGAGGGAGTTGGGGGGAGGAAGCAAATGGGGTAAATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAGAGAGAGGGAGTTGGGGGGAGGAAGCAAATGGGGTAAATTTAC  100

seq1  TGGCCTGTATTTTGTATTTAATCAAGTGACTTTTAATCTTTGGCATATGA  150
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  TGGCCTGTATTTTGTATTTAATCAAGTGACTTTTCATATTTGGCATATGA  150

seq1  GGGAGAGCTGAGCTCTGAGCTACCGTTAC  179
      |||||||||||||||||| ||||||||||
seq2  GGGAGAGCTGAGCTCTGACCTACCGTTAC  179


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