BAC Information

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BAC

Clone NameB6Ng01-266L16
Chromosome13 (Build37)
Map Location 80,356,971 - 80,357,948
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266L16.bB6Ng01-266L16.g
ACCGA070051GA070052
length1,203978
definitionB6Ng01-266L16.b B6Ng01-266L16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaata
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcgtttcctca
gaaaattgaacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaggatgccccaactggtaagaaggacacatgctccactat
gttcatagcagtcttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcttcca
atggagaagctagagaaagtacccaaaggagctaaagggatctgcaaccc
taatagctgggaacaacattatgaactaaccagtacccggagctctgact
ctagaatgcatattgtatcaaagatgctagtcgcatcactggaaagagag
gcccattgactgcaactttaatggccagtaccaggacgccaggcaatggg
atgggttgctagggatcggcacacagtgtatcgagactgatgctgctgta
gta
gaattctaaaggaagaaaaaaaaaagaaaacttggccacaatgagttgat
gatcaagaagttaagatatgagtatttagaagaattgtaactacttttat
cacaagtaaagaaactatcgaaggtgataggcaatcatttcagtatgtgt
atatgttgaaacatgttgtatatcttaaatatgtatgatgaaaaataatc
tgttcatccccaaaacgttcttcatggagctcccaaagtctgttctctta
atttgataggaggaggaggatatagatgtgtgttgttaatgtccttgttg
ctttcttattttctaaaaatttatttctatcttaaacattgccccttagt
ctccattcagatggttccttcccagatacccccttcaccagtgaaagggt
accccaacctgggtatcctctcaccttagttcatcaagtcactgcaggac
tcggtacatcctctcccattgaggccagaggaggcagctgtttgctgcat
gtgtctggggggcgggagtgggggtggcgctcagacagtctggttatgct
atttccttccagtctctggaagcttctggaggaccaggttagttggcact
gttggtcttcctgaggggttgctttcaaggccttcaatccttcccctggc
tcgtccatagatatgcctgacctctgcctaatgtttggctgtttgtatcc
acatatagagacttttcagtatataatgtacattatcagctatagtcatc
atcatagtataagtgcaagctttatgccctttgatcccctagtagccact
gttgtattctgtttctagatataaatattaacagaatttttccttcatct
atttaggcctagttctttttttatgaagtgtgtaatatttcacgtttatt
tatattttgtcaaacgtcgcccattagatagtaaggttaatatagaacta
gtcccttacatgtaacacaaactcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80356971_80357948
seq2: B6Ng01-266L16.g_68_1045 (reverse)

seq1  CTTTGAGTTTGTGTTACATGTAAGGGAATAGTTTCTATTATAAACTTACT  50
      ||||||||||||||||||||||||||| ||| ||||||  ||| ||||||
seq2  CTTTGAGTTTGTGTTACATGTAAGGGACTAG-TTCTATATTAACCTTACT  49

seq1  ATTTAATGTGCGTACATTTTAAAAAATATAAATAAACCTGAAATATTACA  100
      || ||||| ||| || ||| | ||||||||||||||| ||||||||||||
seq2  ATCTAATGGGCG-ACGTTTGACAAAATATAAATAAACGTGAAATATTACA  98

seq1  CACTTCATAAAAAAAGAACTAGG-CTAAATAGATGAA-GAAAAATACTGG  148
      ||||||||||||||||||||||| ||||||||||||| ||||||| || |
seq2  CACTTCATAAAAAAAGAACTAGGCCTAAATAGATGAAGGAAAAATTCT-G  147

seq1  TTAATATTTATATCTAGAAACAGAATACAACAGTGGCTACTAGGGGATCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTATATCTAGAAACAGAATACAACAGTGGCTACTAGGGGATCA  197

seq1  AAGGGCAT-AAGCTTGCACTTATACTATGATGATGACTATAGCTGATAAT  247
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATAAAGCTTGCACTTATACTATGATGATGACTATAGCTGATAAT  247

seq1  GTACATTATATACTGAAAAGTCTCTATATGTGGATACAAACAGCCAAACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTATATACTGAAAAGTCTCTATATGTGGATACAAACAGCCAAACA  297

seq1  TTAGGCAGAGGTCAGGCATATCTATGGACGAGCCAGGGGAAGGATTGAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCAGAGGTCAGGCATATCTATGGACGAGCCAGGGGAAGGATTGAAG  347

seq1  GCCTTGAAAGCAACCCCTCAGGAAGACCAACAGTGCCAACTAACCTGGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAAAGCAACCCCTCAGGAAGACCAACAGTGCCAACTAACCTGGTC  397

seq1  CTCCAGAAGCTTCCAGAGACTGGAAGGAAATAGCATAACCAGACTGTCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAGCTTCCAGAGACTGGAAGGAAATAGCATAACCAGACTGTCTG  447

seq1  AGCGCCACCCCCACTCCCGCCCCCCAGACACATGCAGCAAACAGCTGCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCACCCCCACTCCCGCCCCCCAGACACATGCAGCAAACAGCTGCCT  497

seq1  CCTCTGGCCTCAATGGGAGAGGATGTACCGAGTCCTGCAGTGACTTGATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCCTCAATGGGAGAGGATGTACCGAGTCCTGCAGTGACTTGATG  547

seq1  AACTAAGGTGAGAGGATACCCAGGTTGGGGTACCCTTTCACTGGTGAAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGTGAGAGGATACCCAGGTTGGGGTACCCTTTCACTGGTGAAGG  597

seq1  GGGTATCTGGGAAGGAACCATCTGAATGGAGACTAAGGGGCAATGTTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTGGGAAGGAACCATCTGAATGGAGACTAAGGGGCAATGTTTAA  647

seq1  GATAGAAATAAATTTTTAGAAAATAAGAAAGCAACAAGGACATTAACAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAATAAATTTTTAGAAAATAAGAAAGCAACAAGGACATTAACAAC  697

seq1  ACACATCTATATCCTCCTCCTCCTATCAAATTAAGAGAACAGACTTTGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTATATCCTCCTCCTCCTATCAAATTAAGAGAACAGACTTTGGG  747

seq1  AGCTCCATGAAGAACGTTTTGGGGATGAACAGATTATTTTTCATCATACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCATGAAGAACGTTTTGGGGATGAACAGATTATTTTTCATCATACA  797

seq1  TATTTAAGATATACAACATGTTTCAACATATACACATACTGAAATGATTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGATATACAACATGTTTCAACATATACACATACTGAAATGATTG  847

seq1  CCTATCACCTTCGATAGTTTCTTTACTTGTGATAAAAGTAGTTACAATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCACCTTCGATAGTTTCTTTACTTGTGATAAAAGTAGTTACAATTC  897

seq1  TTCTAAATACTCATATCTTAACTTCTTGATCATCAACTCATTGTGGCCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATACTCATATCTTAACTTCTTGATCATCAACTCATTGTGGCCAA  947

seq1  GTTTTCTTTTTTTTTTCTTCCTTTAGAATTC  978
      |||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTTTTTTTCTTCCTTTAGAATTC  978