BAC Information

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BAC

Clone NameB6Ng01-266L24
Chromosome13 (Build37)
Map Location 58,118,534 - 58,227,253
singlet/doubletdoublet
Overlap geneKlhl3, Hnrpa0
Upstream geneLOC100040995, Spock1
Downstream gene5133401N09Rik, Ubqln1, LOC671252, Gkap1, Kif27, Hnrpk, Rmi1, LOC100041086, Slc28a3, LOC100041510, LOC435361, Ntrk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266L24.bB6Ng01-266L24.g
ACCGA070065GA070066
length473619
definitionB6Ng01-266L24.b B6Ng01-266L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,226,775 - 58,227,253)(58,118,534 - 58,119,152)
sequence
aattcttacatgattgagtgagagtatgtataacctggtgggtgggctca
gagtacctgctatcttactgggtttgacgagatggtaaaaatttgactcg
gattttggaagcctaaagcctaatggcatcaagcttttcagaaaagattt
ttctttttaccttttaaaatattttaatgttggaaccccacattttaagt
tgtcactgaataattcctaagatctgattcttgccaaaatattgtaagta
ctaaggttcttaaagaggtaagaggatttatgtttggctagtttggtaag
tgtagtgagtgatagctgatgtttgggtcatgtatttaacactgtatagg
ggtgtgtttgctgtggaagaaaaaaagttggatgaagttctttgctcaca
attgcttgcttcccttaaattcctgcttgaaactacacttgaagatctaa
tgcaggctttggtgggggggggg
gaattccatgcttcgtctctggagtaatacagcagtcagccaggctttcc
cctctgccgaagaagttccactgcaataaccatctatgcccttcttagct
tatgctcactgaggagctgtcagagagacgttcaataaagaaaaacaaaa
caaacaacactgcatttatctccctcagagacagagactactgctgtaga
tggagtcactgtcttcgataaactgcctggctcagtatcctgtctggtga
cgtaagcacagatgtcctctctccaaactcacacccactaacacttcaaa
ttgaaatgtttacaattgtttcttatgtgtgtgagtgtttggcctgcatg
tatgtctgtgcactccatgagtgcagtgtctgtggaggccagaagaggtc
atcggataccctgcaactggagttacagatgcttgtaagctgccacacgg
atgcttagaaatgaatctgggtggcacatgcctgtaatcccagcacttgg
gaggcagaggcaggcggatttctgagtcccaggccagcctggtctacaga
gcaagttccaggacaaccagggctatacagagaaaccctgtctcggaaag
cagaaggaaagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_58226775_58227253
seq2: B6Ng01-266L24.b_43_521 (reverse)

seq1  CCCCCCCCCCACCAAAGCCTGCATTAGATCTTCAAGTGTAGTTTCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACCAAAGCCTGCATTAGATCTTCAAGTGTAGTTTCAAGCA  50

seq1  GGAATTTAAGGGAAGCAAGCAATTGTGAGCAAAGAACTTCATCCAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTAAGGGAAGCAAGCAATTGTGAGCAAAGAACTTCATCCAACTTT  100

seq1  TTTTCTTCCACAGCAAACACACCCCTATACAGTGTTAAATACATGACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCACAGCAAACACACCCCTATACAGTGTTAAATACATGACCCA  150

seq1  AACATCAGCTATCACTCACTACACTTACCAAACTAGCCAAACATAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAGCTATCACTCACTACACTTACCAAACTAGCCAAACATAAATCC  200

seq1  TCTTACCTCTTTAAGAACCTTAGTACTTACAATATTTTGGCAAGAATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTCTTTAAGAACCTTAGTACTTACAATATTTTGGCAAGAATCAG  250

seq1  ATCTTAGGAATTATTCAGTGACAACTTAAAATGTGGGGTTCCAACATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGAATTATTCAGTGACAACTTAAAATGTGGGGTTCCAACATTAA  300

seq1  AATATTTTAAAAGGTAAAAAGAAAAATCTTTTCTGAAAAGCTTGATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAAAAGGTAAAAAGAAAAATCTTTTCTGAAAAGCTTGATGCCA  350

seq1  TTAGGCTTTAGGCTTCCAAAATCCGAGTCAAATTTTTACCATCTCGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTTAGGCTTCCAAAATCCGAGTCAAATTTTTACCATCTCGTCAA  400

seq1  ACCCAGTAAGATAGCAGGTACTCTGAGCCCACCCACCAGGTTATACATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTAAGATAGCAGGTACTCTGAGCCCACCCACCAGGTTATACATAC  450

seq1  TCTCACTCAATCATGTAAGAATTGAATTC  479
      |||||||||||||||||||||||||||||
seq2  TCTCACTCAATCATGTAAGAATTGAATTC  479

seq1: chr13_58118534_58119152
seq2: B6Ng01-266L24.g_65_683

seq1  GAATTCCATGCTTCGTCTCTGGAGTAATACAGCAGTCAGCCAGGCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTTCGTCTCTGGAGTAATACAGCAGTCAGCCAGGCTTTCC  50

seq1  CCTCTGCCGAAGAAGTTCCACTGCAATAACCATCTATGCCCTTCTTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCGAAGAAGTTCCACTGCAATAACCATCTATGCCCTTCTTAGCT  100

seq1  TATGCTCACTGAGGAGCTGTCAGAGAGACGTTCAATAAAGAAAAACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCACTGAGGAGCTGTCAGAGAGACGTTCAATAAAGAAAAACAAAA  150

seq1  CAAACAACACTGCATTTATCTCCCTCAGAGACAGAGACTACTGCTGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACACTGCATTTATCTCCCTCAGAGACAGAGACTACTGCTGTAGA  200

seq1  TGGAGTCACTGTCTTCGATAAACTGCCTGGCTCAGTATCCTGTCTGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCACTGTCTTCGATAAACTGCCTGGCTCAGTATCCTGTCTGGTGA  250

seq1  CGTAAGCACAGATGTCCTCTCTCCAAACTCACACCCACTAACACTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGCACAGATGTCCTCTCTCCAAACTCACACCCACTAACACTTCAAA  300

seq1  TTGAAATGTTTACAATTGTTTCTTATGTGTGTGAGTGTTTGGCCTGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTTTACAATTGTTTCTTATGTGTGTGAGTGTTTGGCCTGCATG  350

seq1  TATGTCTGTGCACTCCATGAGTGCAGTGTCTGTGGAGGCCAGAAGAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGTGCACTCCATGAGTGCAGTGTCTGTGGAGGCCAGAAGAGGTC  400

seq1  ATCGGATACCCTGCAACTGGAGTTACAGATGCTTGTAAGCTGCCACACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGATACCCTGCAACTGGAGTTACAGATGCTTGTAAGCTGCCACACGG  450

seq1  ATGCTTAGAAATGAATCTGGGTGGCACATGCCTGTAATCCCAGCACTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGAAATGAATCTGGGTGGCACATGCCTGTAATCCCAGCACTTGG  500

seq1  GAGGCAGAGGCAGGCGGATTTCTGAGTCCCAGGCCAGCCTGGTCTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGCGGATTTCTGAGTCCCAGGCCAGCCTGGTCTACAGA  550

seq1  GCAAGTTCCAGGACAACCAGGGCTATACAGAGAAACCCTGTCTCGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCCAGGACAACCAGGGCTATACAGAGAAACCCTGTCTCGGAAAG  600

seq1  CAGAAGGAAAGAGAGAGAG  619
      |||||||||||||||||||
seq2  CAGAAGGAAAGAGAGAGAG  619