BAC Information

Click to search

BAC

Clone NameB6Ng01-266P10
Chromosome13 (Build37)
Map Location 8,228,059 - 8,228,701
singlet/doubletsinglet
Overlap geneAdarb2
Upstream geneLOC667611, EG623516, LOC791083, LOC382722
Downstream geneEG666941, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266P10.b
ACCGA070225
length643
definitionB6Ng01-266P10.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcaaccaatcaaagcaatcttctgttattcattggttgtac
ttgatgtatacgctgtagtggtttggacaaagcctataccatcactttac
aagatgaatcaataaattcctggacagtagatttaggaggggacagcagt
aggcctttacttatcaagttcaacagagaaacttacacaatatagaagca
aggtacattttaaaacttattatcacagatgtgagagtcttttattcagg
caatctagtgtaccaagataaaggatggggatgcttggcagaattcaaga
gtggctgcccttatttctctctactgaaatgtctttctgacactgcattt
tctggactttttaaaaaattatcagtcccacatatttattaatttgtata
tctctagagttgctgatgtactgataatttgcattagcagtttagaactt
gctttaaactgacttgcaaaatttgcttagacagaatactcaagtgttgt
aactaaattacaaagtagttgtcagtgttcccaaaagtttgttgtaacat
atatgaaaggttttattttttaaaaaaatactattaattagttaattagt
gtatttgtttatttggtgtgtgtatatatatatatgtatgtat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8228059_8228701
seq2: B6Ng01-266P10.b_46_688

seq1  GAATTCTTTGCAACCAATCAAAGCAATCTTCTGTTATTCATTGGTTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCAACCAATCAAAGCAATCTTCTGTTATTCATTGGTTGTAC  50

seq1  TTGATGTATACGCTGTAGTGGTTTGGACAAAGCCTATACCATCACTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTATACGCTGTAGTGGTTTGGACAAAGCCTATACCATCACTTTAC  100

seq1  AAGATGAATCAATAAATTCCTGGACAGTAGATTTAGGAGGGGACAGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAATCAATAAATTCCTGGACAGTAGATTTAGGAGGGGACAGCAGT  150

seq1  AGGCCTTTACTTATCAAGTTCAACAGAGAAACTTACACAATATAGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTACTTATCAAGTTCAACAGAGAAACTTACACAATATAGAAGCA  200

seq1  AGGTACATTTTAAAACTTATTATCACAGATGTGAGAGTCTTTTATTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACATTTTAAAACTTATTATCACAGATGTGAGAGTCTTTTATTCAGG  250

seq1  CAATCTAGTGTACCAAGATAAAGGATGGGGATGCTTGGCAGAATTCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTAGTGTACCAAGATAAAGGATGGGGATGCTTGGCAGAATTCAAGA  300

seq1  GTGGCTGCCCTTATTTCTCTCTACTGAAATGTCTTTCTGACACTGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCCCTTATTTCTCTCTACTGAAATGTCTTTCTGACACTGCATTT  350

seq1  TCTGGACTTTTTAAAAAATTATCAGTCCCACATATTTATTAATTTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTTTTTAAAAAATTATCAGTCCCACATATTTATTAATTTGTATA  400

seq1  TCTCTAGAGTTGCTGATGTACTGATAATTTGCATTAGCAGTTTAGAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGTTGCTGATGTACTGATAATTTGCATTAGCAGTTTAGAACTT  450

seq1  GCTTTAAACTGACTTGCAAAATTTGCTTAGACAGAATACTCAAGTGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAACTGACTTGCAAAATTTGCTTAGACAGAATACTCAAGTGTTGT  500

seq1  AACTAAATTACAAAGTAGTTGTCAGTGTTCCCAAAAGTTTGTTGTAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATTACAAAGTAGTTGTCAGTGTTCCCAAAAGTTTGTTGTAACAT  550

seq1  ATATGAAAGGTTTTATTTTTTAAAAAAATACTATTAATTAGTTAATTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAGGTTTTATTTTTTAAAAAAATACTATTAATTAGTTAATTAGT  600

seq1  GTATTTGTTTATTTGGTGTGTGTATATATATATATGTATGTAT  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTTTATTTGGTGTGTGTATATATATATATGTATGTAT  643


| Home | SequenceCutter | Blast | Download |