BAC Information

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BAC

Clone NameB6Ng01-267B06
Chromosome13 (Build37)
Map Location 55,688,334 - 55,689,149
singlet/doubletsinglet
Overlap genenone
Upstream geneD13Wsu177e, Higd2a, Cltb, Ubxd8, Rn4.5s-ps3, Rnf44, BC040758, Gprin1, Sncb, Eif4e1b, Tspan17, Unc5a, Hk3, Uimc1, LOC622707, Zfp346, Fgfr4, Nsd1, Rab24, Prelid1, Mxd3, Lman2, Rgs14, Slc34a1, Pfn3, F12, Gprk6, Prr7, Dbn1, Pdlim7, Dok3, Ddx41, BC021381
Downstream geneTmed9, B4galt7, Caml, Ddx46, B230219D22Rik, 2310047H23Rik, Pcbd2, Catsper3, Pitx1, H2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267B06.bB6Ng01-267B06.g
ACCGA070304GA070305
length164821
definitionB6Ng01-267B06.b B6Ng01-267B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgatctcctgccttggcttcccaagtgctatgactgtgagtgtgaccac
catacccagcagaaagagaaacagcgtgggtgcagaaatgtgaagtgact
accttctggttttgtagttgttgttgttagtttttttggtttttggtttg
tttggtttggggtt
gaattcaagtctatactgagagactgagtctattgctctcctcaaggcac
tgtgagcttcaaggttttgaggttgtctttttcccaagtgttcattctgt
tgtaatagccagcctgcctgtgtttctttttttctttttccctttcttcc
tcttttttttttttattttttttttattttttttaaagatttatttattt
attatatgtaagtacactgtagctgtcttcagacactccagaagagggca
tcagatctcattacgggtggttgtgagccaccatgtggttgctgggattt
gaactttggacctttggaagagcagtcgggtgctcttacccactgagcca
tctcaccagccccccctttcttcctcttaaggctttttaaaaaatgtctg
gtaaaatagacaaaccatttgctatgttaatcttacagtcaatagttcag
tggtgtcgggtagtggtggtgcacgcctttaatcccagcacttgggaggc
agaggcaggcggatttctgagttcgaggccagtctggtctacaaagtgag
ttccaagacagccagggctacacagagaaaccctgtctcaaaaaaaaacc
aaaaaaaaaaatagttcagtggtattaaaaacagccacatctgtgcaaca
gatcttcagaacttttgttatttcacacttaaactctgggaaacatcttc
ccacttcccccagcccctgtcagtcactatgtttctatctttttttgata
aacttgactgctccagatatgttgcattagagttataagtctatgcatat
tgcacacagaatatgtctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_55688334_55689149
seq2: B6Ng01-267B06.g_69_889

seq1  GAATTCAAGTCTATACTGAGAGACTGAGTCTATTGCTCTCCTCAAGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCTATACTGAGAGACTGAGTCTATTGCTCTCCTCAAGGCAC  50

seq1  TGTGAGCTTCAAGGTTTTGAGGTTGTCTTTTTCCCAAGTGTTCATTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTTCAAGGTTTTGAGGTTGTCTTTTTCCCAAGTGTTCATTCTGT  100

seq1  TGTAATAGCCAGCCTGCCTGTGTTTCTTTTTTTCTTTTTCCCTTTCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGCCAGCCTGCCTGTGTTTCTTTTTTTCTTTTTCCCTTTCTTCC  150

seq1  TCTTTTTTTTTTTTATTTTTTTTTTATTTTTTTTAAAGATTTATTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTATTTTTTTTTTATTTTTTTTAAAGATTTATTTATTT  200

seq1  ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCA  250

seq1  TCAGATCTCATTACGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTCATTACGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTT  300

seq1  GAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCA  350

seq1  TCTCACCAGCCCCCCCTTTCTTCCTCTTAAGGCTTTTTAAAAAATGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGCCCCCCCTTTCTTCCTCTTAAGGCTTTTTAAAAAATGTCTG  400

seq1  GTAAAATAGACAAACCATTTGCTATGTTAATCTTACAGTCAATAGTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATAGACAAACCATTTGCTATGTTAATCTTACAGTCAATAGTTCAG  450

seq1  TGGTGTCGGGTAGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCGGGTAGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGC  500

seq1  AGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGTCTGGTCTACAAAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGTCTGGTCTACAAAGTGAG  550

seq1  TTCCAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAAACC  600

seq1  AAAAAAAAAAATAGTTCAGTGGTATTAAAAACAGCCACATCTGTGCAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAATAGTTCAGTGGTATTAAAAACAGCCACATCTGTGCAACA  650

seq1  GATCTTCAGAACTTTTGTTATTTCACACTTAAACTCTGGGAAACATCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAGAACTTTTGTTATTTCACACTTAAACTCTGGGAAACATCTTC  700

seq1  CCACTTCCCCCAG-CCCTGTCAGTCACTATGTTTCTATC-TTTTTTGATA  748
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  CCACTTCCCCCAGCCCCTGTCAGTCACTATGTTTCTATCTTTTTTTGATA  750

seq1  AACTTGACTGCTCCAGATATGTTGCA-TAGAG-TATAAGTCTATGCATA-  795
      |||||||||||||||||||||||||| ||||| |||||||||||||||| 
seq2  AACTTGACTGCTCCAGATATGTTGCATTAGAGTTATAAGTCTATGCATAT  800

seq1  TGCACACAGTATATGTCTATG  816
      ||||||||| |||||||||||
seq2  TGCACACAGAATATGTCTATG  821