BAC Information

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BAC

Clone NameB6Ng01-267D19
Chromosome13 (Build37)
Map Location 89,790,901 - 89,791,281
singlet/doubletsinglet
Overlap genenone
Upstream geneEdil3, Hapln1, EG667266
Downstream geneVcan, LOC100042940, Xrcc4, Tmem167, LOC100043170, LOC624190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267D19.bB6Ng01-267D19.g
ACCGA070423GA070424
length1,204774
definitionB6Ng01-267D19.b B6Ng01-267D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacaacaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaaagaaagacagcattttcaacaattggtgctg
gcacaactgggttgttatcatgtagaagaatgcgaatcgatccatactta
tctccttgtactaggtcaaatctaagtggatcaggacttcacataaaacc
agagacactgaacttatagaggagaaggtgggggaaaggcctggagaaat
ggcacagggtaaaaattccttgaacagaaagcaatgcctggcctgtagat
cgaattgacaatggacctaatggacttcaatgtttctgccaggcaaagga
aact

gaattcctgagagaagaggtgacttagagtggtgaatcaaaagtctaatc
atggactataagctaactgcctttgttttgctctagacagattttccttg
agctagctttcttttataattctaaaaattctatagataacacatccctt
gcagacaaaaagcccagtcttttatttgcatatcaattcaatcattaccc
tctagatttctttttgattaccacatgaatctctttcctgtaacccttta
ttcttagaaaaaaagcagcaagaatatttttttttaatataactaaagaa
ttcagagatcttcctgccttttataagcacagataataagctagatggga
ggcaccctggtcaaaaattaccattcctaccactcctgggcctgaacata
agttcttcttatcccagcctgaccttgaactcaagaatctgcctgccttt
gtatcttcttgactagttggctcaaaatgaggctacctcggttcttttag
gcttgtgaaccccttcatataattcatattgcatccttatattttgcata
gttgcaaaattatacattttgaactcatgtttacagaattctttcccaca
gccttaaggactatcctgaaagtctcagtatttaccaatttgttgagaca
tagaaaacctttgcttcccagactcatgcttcttctaattatcatggcgt
cattaaccttcgctgggagaataattcctgaagaaggagcatatatgtgt
gtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_89790901_89791281
seq2: B6Ng01-267D19.g_794_840 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  50
                ||||||||||||||||||||||||||||| | |  | |  
seq2  ----------ACACACACACACACACACACACACACACATATATGCTCCT  40

seq1  AC-ACAGAGACAGAGACAGAGACAGACAGAGAAAAGTGCACACTCATACG  99
       |  |||                                           
seq2  TCTTCAG-------------------------------------------  47

seq1  CATTAAATGAACAAAAAAATAAATGTAAAAATGTTAAAGGGTGATAACAC  149
                                                        
seq2  --------------------------------------------------  47

seq1  ACACACACACATATATGTGTGTGTATATAGACTGTTGTAGTGCTTTATAG  199
                                                        
seq2  --------------------------------------------------  47

seq1  ATGCTTGACCTAGGGAGTGGCACTATTAGGAAGTGTGGCATCGTTGGAGC  249
                                                        
seq2  --------------------------------------------------  47

seq1  ATGTGTGGCCTTACTGAAGGAAGTGTGTCACTCTAGGGATGGACTTTGAA  299
                                                        
seq2  --------------------------------------------------  47

seq1  ACCCTTCTCCTAGCCACATGGGAGCCAGTATGCTCCTGGCTGCCTTCAAA  349
                                                        
seq2  --------------------------------------------------  47

seq1  TTAAGATGTAAGACTCTTAGCTCCTTCTTCAG  381
                                      
seq2  --------------------------------  47


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