BAC Information

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BAC

Clone NameB6Ng01-267E06
Chromosome13 (Build37)
Map Location 65,913,282 - 66,205,582
singlet/doubletdoublet
Overlap geneLOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
Upstream geneCntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722
Downstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267E06.bB6Ng01-267E06.g
ACCGA070442GA070443
length1,0341,090
definitionB6Ng01-267E06.b B6Ng01-267E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,913,282 - 65,918,912)(66,204,517 - 66,205,582)
sequence
gaattctgcaacatatgagaaggtgaaaagtagaaattattggaatagaa
gaagaatatcagctcaaaggtctagaaaatattttcagtgaaattatgaa
tgaaaaattttctaaactaaagaagaaaatacctattaaagtacaagaag
catccaaaatagcaaatagattggaccaaaaaagtccttttgccacataa
cagtcaaaactctaaacatgtaaagcaaagaaatatgaaaaactgcaaca
gaaaaaattaaaaactaaataaaacaaaaactagtaacgtatggaagcag
acctattagcttcatatctgtcttctcaatgtctactagaaaagacatca
gtgtttggacagttttgtgctgcacagtgaaagaaaccacccatgtttct
acaagaaagcaactggtccaaatgttttggagagattcagaatcagctat
gataatgaagttattcagaggtcactgcctgagacctcacacgtgttccc
atctgggtgatgcttcccatgcagccccaaaaaggacccacaccccagct
ctcactgctcaaccacctgcccctaccgattgtgggcagtgatcctgtgc
tcaccatgtctaaatctcagagcttcctgaggtcccctcaatgcacccaa
cagcagatctcagagcaggacacagagaaccattcaagccagcacagcca
cagcaatctagtagaaaggcacccggaagatcccgcctctttgtctgact
ggcatgtctgcctggagaccttgattggccagtgagtcttacccctcctc
aaggttgaagtgtgcttcctgtcgaaggctggagctttttccagattctc
tggagcccttttcagctcattagcatttgtgcttgccctgggggaagaat
tcaccattcccagctcaggcaatcagctgccagctcctcccccttctgtg
agcaatgatcctaactctcatacctttgcttgaacattctttcatagcct
cttgccgtttccttttcctgaaatcaaggtgagt
gaattcataatcagtgttaggatattcattatggaatgatgttttttttt
gtcatgacagggtttctctgtgtaacagcccagctctcctagaacttgct
ttgcagaccaggctgacctctaactcacagacatgcttgcctctgcctcc
tgagtgctgggataaaaggcatgcaccactataacccagctagataatct
ttttagtcagatgacaaactaagtcagaaattgtggtaggatgaatggtg
tgggtgctgtggtcccagggtggggcctggtagacagttagggaggctcc
catacagctctgaccgtatgagtgcccatgtctgtggcatattgagtgtc
ttagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagtt
ggggaggaaagggtttattcggcttacacttccatactgctgttcatcac
caaggaagtcaggactggaactcatgcaggtcaggaagcaggagctgatg
cagaggccatggagggatgttctttactggcttgcctcacctggcttgct
cagcctgctctcttatagaacccaagactaccagcccagagatcttccca
cccacaaggggcctttcccccttgatcactaattgagaaaatgccttaca
gttggatctcatggaggcatttcctcaagtgaaagctcctttctctgtga
taactccagctgtgtcaagttgacacaaaactagccagtacactgagtaa
caaaagatagagggatccttgcaaattagtgagcctgagtttgggcctga
aaacacagtggtggctgcttttcccccatctgcacagaagtcctgtctgg
tggttagccctccctatagtgatagtgggaattgggttagcttacctcca
gtagctcttatgtgattccccattggttccgaaggctgtataaaaatgcc
tgaatgtctactacacaatacaacagaatatgcatcttcaatgttttgtc
ttcctgaagtctgtaatccaattatagcaattctgcatcctgcacccctt
tcaggtatccctgttcccccaatggatgaaagaatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65913282_65918912
seq2: B6Ng01-267E06.b_44_1077

seq1  GAATTCTGCAACATATGAGAAGGTGAAAAGTAGAAATTCTTGGAATAGAA  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAATTCTGCAACATATGAGAAGGTGAAAAGTAGAAATTATTGGAATAGAA  50

seq1  GAAGAATATCAGCTCAAAGGTCTAGAAAATATTTTCAGTGAAATTATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATCAGCTCAAAGGTCTAGAAAATATTTTCAGTGAAATTATGAA  100

seq1  TGAAAAATTTTCTAAACTAAAGAAGAAAATACCTATTAAAATACAAGAAG  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAAAAATTTTCTAAACTAAAGAAGAAAATACCTATTAAAGTACAAGAAG  150

seq1  CATCCAAAATAGCAAATAGATTGGACCAAAAAAGTCCTTTTGCCACATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAAATAGCAAATAGATTGGACCAAAAAAGTCCTTTTGCCACATAA  200

seq1  CAGTCAAAACTCTAAACATGTAAAGCAAAGAAATATGAAAAACTGCAAGA  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGTCAAAACTCTAAACATGTAAAGCAAAGAAATATGAAAAACTGCAACA  250

seq1  GAAAAAATTAAAAAGTAAATAAAACAAAAACAAGTAACGTATGGAAGCAG  300
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  GAAAAAATTAAAAACTAAATAAAACAAAAACTAGTAACGTATGGAAGCAG  300

seq1  ACCTATTAGCTTCATATCTGTCTTCTCAATGTCTACTAGTAAAGACATCA  350
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCTATTAGCTTCATATCTGTCTTCTCAATGTCTACTAGAAAAGACATCA  350

seq1  GCGTTTGGACCGTTTTGTGCTGCATAGTGAAAGAAACTACCCATGTTTCT  400
      | |||||||| ||||||||||||| |||||||||||| ||||||||||||
seq2  GTGTTTGGACAGTTTTGTGCTGCACAGTGAAAGAAACCACCCATGTTTCT  400

seq1  ACAAGAAAGCAACTGGCGCAAATGTTTTGGACAGATTCAGAATCAGCTAT  450
      ||||||||||||||||  ||||||||||||| ||||||||||||||||||
seq2  ACAAGAAAGCAACTGGTCCAAATGTTTTGGAGAGATTCAGAATCAGCTAT  450

seq1  GATAATGAAGTTATTCAGAGGTCACTGCCTGAGACCTCACACGTGTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGAAGTTATTCAGAGGTCACTGCCTGAGACCTCACACGTGTTCCC  500

seq1  ATCTGGGTGATGCTTCCCATGCAGCCCCAGAGAGGACCCACCACCCCACC  550
      ||||||||||||||||||||||||||||| | |||||||| ||||||| |
seq2  ATCTGGGTGATGCTTCCCATGCAGCCCCAAAAAGGACCCA-CACCCCAGC  549

seq1  TCCCCCTGCTCAACCACCTGCCCCTACCCATTGTGGGCAGTGATCCTGTG  600
      || | ||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTCACTGCTCAACCACCTGCCCCTACCGATTGTGGGCAGTGATCCTGTG  599

seq1  CTCACCATGTCTAAATCTCAGAACTTCCTGAGGTCCCCTCAATGCACCCG  650
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  CTCACCATGTCTAAATCTCAGAGCTTCCTGAGGTCCCCTCAATGCACCCA  649

seq1  ACAGCAGATCTCAGAGCAGGACACAGAGAACCATTCAAGCCTGCACAGCC  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACAGCAGATCTCAGAGCAGGACACAGAGAACCATTCAAGCCAGCACAGCC  699

seq1  ACAGCGATCTTGTAGAAAGGCACCCGGAAGATCCCGCCTCTTTGTCTGAC  750
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATCTAGTAGAAAGGCACCCGGAAGATCCCGCCTCTTTGTCTGAC  749

seq1  AGGCATGTCTGCCTGGAGACCTTGATTGGCCAGTGAGTCTTACCCCTCTT  800
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGCATGTCTGCCTGGAGACCTTGATTGGCCAGTGAGTCTTACCCCTCCT  799

seq1  CAATGTTAAAGTGTGCTTCCTGTCAAAGGCTAGA-CCTTTTCCAGA-TCT  848
      ||| ||| |||||||||||||||| |||||| || | ||||||||| |||
seq2  CAAGGTTGAAGTGTGCTTCCTGTCGAAGGCTGGAGCTTTTTCCAGATTCT  849

seq1  CTGGAGCCCCTTTCAGCTCATTAGCATTAGTGCTTGCCCTGGGGGAAGAA  898
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  CTGGAGCCCTTTTCAGCTCATTAGCATTTGTGCTTGCCCTGGGGGAAGAA  899

seq1  ACCACCATT-CCAGCTCAGGCTATTCTGCTGCCAGCTCCTCCCC--TCTA  945
        ||||||| ||||||||||| | || |||||||||||||||||  ||| 
seq2  TTCACCATTCCCAGCTCAGGC-AATCAGCTGCCAGCTCCTCCCCCTTCTG  948

seq1  TGAGCAATAATCCTGAC-ATCAGACC-TTGCCTGAACATTC-TTCATAG-  991
      |||||||| ||||| ||  ||| ||| |||| ||||||||| ||||||| 
seq2  TGAGCAATGATCCTAACTCTCATACCTTTGCTTGAACATTCTTTCATAGC  998

seq1  CACTTGC--ATTCTTTTCCCTGAAATCAAGGTGAGTAGCTTGAATAGCCC  1039
      | |||||   ||| ||| ||||||||||||||||||              
seq2  CTCTTGCCGTTTCCTTTTCCTGAAATCAAGGTGAGT--------------  1034

seq1  ATTAATCTAGCTGCATTGTAGGTATCAATCTGACCCAGGAATGGAAGGGT  1089
                                                        
seq2  --------------------------------------------------  1034

seq1  GGCCAGGCTATTAACATTAAAAAGGAATTTTAGAAAACAAGAGGCTTTTT  1139
                                                        
seq2  --------------------------------------------------  1034

seq1  AAAATATATGTAGATTGCCAAAAGAAACTATAGCCTAGATTAAATGTGGA  1189
                                                        
seq2  --------------------------------------------------  1034

seq1  TCTGAACATCTCAAAAGATCAAGAATAAGAAAGGGTTTCTCACCTCAAAA  1239
                                                        
seq2  --------------------------------------------------  1034

seq1  GGTATAATTAAGAAATATCCCCCACAGTAAGCAGGGTTAGAATTAGGATT  1289
                                                        
seq2  --------------------------------------------------  1034

seq1  AGGCGATTAGAGGGTTATGGTAAGGATTAGGATAAGGGTTGTTAGGATTA  1339
                                                        
seq2  --------------------------------------------------  1034

seq1  GGGTTAGGGTAGTTAGGAAAATAAGGGTTGAGGTTTAAGAATGGGTAAGA  1389
                                                        
seq2  --------------------------------------------------  1034

seq1  GGTTGGGGGTAAGTCCCAGGGTTAGGCTCAGGGTTAGGGCTAAGGTGGCC  1439
                                                        
seq2  --------------------------------------------------  1034

seq1  ACCATTATTCTTGATGGTTCTACTGAGTCAATAGTATCCCTGTTACACAA  1489
                                                        
seq2  --------------------------------------------------  1034

seq1  AGAAGAAATATCATGGTTAGGGCTAGGCTCAAAGTTAGGGCAATGGATTT  1539
                                                        
seq2  --------------------------------------------------  1034

seq1  GCTGTGCTATGTGAAATCAGCTTCTATCTTTTCTCTCATCTGCCTCCCTA  1589
                                                        
seq2  --------------------------------------------------  1034

seq1  GTCCTCTTTTTCATAATATCATCATCTATTTTCCTGCCCCCAGGAAAGTG  1639
                                                        
seq2  --------------------------------------------------  1034

seq1  GAAAGGAGGTTATCCAAGAATCTGGAACTTCCTGATGGGAAATTTCTTTA  1689
                                                        
seq2  --------------------------------------------------  1034

seq1  CATTGCCAAGGGGCCCAATTCACATAGAACAGAAAACCACTACTGCATTG  1739
                                                        
seq2  --------------------------------------------------  1034

seq1  GTTGTTCTAAGTTTCACTTGGGGATCCTCCTAAGATGAAAGCAATTATGG  1789
                                                        
seq2  --------------------------------------------------  1034

seq1  AACTTGGTGCTCTTCTTTGATAATGATATCATAAATATAGCATAGGCCAT  1839
                                                        
seq2  --------------------------------------------------  1034

seq1  GTGTCAACACAGATTTAGTTCATATAACCATGTGGTTCAAGACAAAATGG  1889
                                                        
seq2  --------------------------------------------------  1034

seq1  TGGACAACATGATTCTTGATGGTACAACTGAATCAGTAGTATCCCGATTA  1939
                                                        
seq2  --------------------------------------------------  1034

seq1  TACAAAAAAGAAATATTTTTTTCCATTTTTTATTAGGTATTTAGCTCATT  1989
                                                        
seq2  --------------------------------------------------  1034

seq1  TACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACT  2039
                                                        
seq2  --------------------------------------------------  1034

seq1  CCCCTACCCACCCACTCCCCCTATTTGTCCCTGACGTTCCCCTGTACTAG  2089
                                                        
seq2  --------------------------------------------------  1034

seq1  GGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  2139
                                                        
seq2  --------------------------------------------------  1034

seq1  ACTAAGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGT  2189
                                                        
seq2  --------------------------------------------------  1034

seq1  ACTGATTAGTTCATAATCTTGTTCCACCTATAGGGTTGCAGATCCCTTTA  2239
                                                        
seq2  --------------------------------------------------  1034

seq1  GCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCAT  2289
                                                        
seq2  --------------------------------------------------  1034

seq1  CCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAT  2339
                                                        
seq2  --------------------------------------------------  1034

seq1  ATTCGCACAAGAGACAGCTACATCACAAGGTGTCAGTAAAGGCTAACCAG  2389
                                                        
seq2  --------------------------------------------------  1034

seq1  CAGATTCATACATGTTTACAGAGGAGAAGATGAAGACAGGATGGCAGCTG  2439
                                                        
seq2  --------------------------------------------------  1034

seq1  TGAGTCATGAAGCAGGGTTTCAAGTCTGCTCTAACCCTCCAAGCACTTTA  2489
                                                        
seq2  --------------------------------------------------  1034

seq1  GACCAAGGGCACACCATCCTCTATACCAGACTATGGAACATCTTCCAAGG  2539
                                                        
seq2  --------------------------------------------------  1034

seq1  CCCTGTGGCTACAACTCTCCAGTGCACCCACTGTACCATGGTTCCAAGTA  2589
                                                        
seq2  --------------------------------------------------  1034

seq1  CACTTGAATCATCTCCCTCTATGAATAATCAAGAAAAATAATAAAACCAA  2639
                                                        
seq2  --------------------------------------------------  1034

seq1  GACACACCAACACAAATGTGACAGACAAGCCAATGATACAAAGAACAACA  2689
                                                        
seq2  --------------------------------------------------  1034

seq1  ATGACACATTCTAACAGCTGGCCTTTCAACACCTCTGTTCTGAGTCCTGG  2739
                                                        
seq2  --------------------------------------------------  1034

seq1  AGGTCTTGGAGTTTCAGTCAACGCACCAAGATATTTTACCCAAGTCACAG  2789
                                                        
seq2  --------------------------------------------------  1034

seq1  GAACCTCAATGACAACCAAGGATCTTATTGCAATGCAAACACACAAGGTT  2839
                                                        
seq2  --------------------------------------------------  1034

seq1  TTGTATTATGGGCTCAGTAACAAGGTCTGAAACCAGTCAACCTGGCATCG  2889
                                                        
seq2  --------------------------------------------------  1034

seq1  GGTCCAAAATGAGAGACCAAGTCTAGAGTTGCTGGATATATATTGTAGTT  2939
                                                        
seq2  --------------------------------------------------  1034

seq1  ACGGCAAGGCTGGGGAATTTCCATACAGGTCAGCAACCTAATATTTTGAA  2989
                                                        
seq2  --------------------------------------------------  1034

seq1  AATATTATCTGGCATAATCTGCAGGAACCAAACATGAAGCAAAAACTATC  3039
                                                        
seq2  --------------------------------------------------  1034

seq1  TGACAACCATGATGGCTAAGCTACAATTTTTTTTTCCCTGCAAGATGTAT  3089
                                                        
seq2  --------------------------------------------------  1034

seq1  TAGTTATCTATATGTAGCTTGACCCTGCTGCTGTACCTTCACTGGCTGCT  3139
                                                        
seq2  --------------------------------------------------  1034

seq1  CATAGGATGTTTGCTCAGGTGTTCTTTGTGCACTCTCAAAAACGCATTTG  3189
                                                        
seq2  --------------------------------------------------  1034

seq1  GTTGAGCTTTACAATTCACCCTTGTGCCTGAGCCCATTATTATTGGAAAA  3239
                                                        
seq2  --------------------------------------------------  1034

seq1  TAGTCCTTTTCAACCACAAGCCATGCCTATCAGTAGACTAGGTAATTTGA  3289
                                                        
seq2  --------------------------------------------------  1034

seq1  CCAAAGACCTACCTCACTATCTATTACTGCAGACTCTAATATCAGTTACC  3339
                                                        
seq2  --------------------------------------------------  1034

seq1  CTTACCACTGGACAAAATACCAGTAGAAGTTTCCTCTCCCCCTGTGCATG  3389
                                                        
seq2  --------------------------------------------------  1034

seq1  CCTCCTGTAGCTACCACAGATAATCCCCACCTACCCTTCCTTTCCTGCCT  3439
                                                        
seq2  --------------------------------------------------  1034

seq1  CATCCTTCAGTCTCAGCCCCCACTTGGGCAGACACATACTGCTCAACCAC  3489
                                                        
seq2  --------------------------------------------------  1034

seq1  ATGCCATGCCTGAAAGGACACCAGGTAAGCTTCCATAGATCTACCACACT  3539
                                                        
seq2  --------------------------------------------------  1034

seq1  ATGTGCTATCCCAGATGTAATTTTCACAGTTGTCCCTAGCACTTTACCAA  3589
                                                        
seq2  --------------------------------------------------  1034

seq1  ACAGCAAAGGCAGCTTAATCTCTCTCCTGACTATGTCTCCTTGTGGGTTG  3639
                                                        
seq2  --------------------------------------------------  1034

seq1  CTAAGATCATCTCTTTCTGCCTGCCTCTTTTTTCATCTTTCAACATTAGT  3689
                                                        
seq2  --------------------------------------------------  1034

seq1  AAGCATTCCCCCTTGAACATACCTCCAAACAGGTCCATCAAAGAAGCAAC  3739
                                                        
seq2  --------------------------------------------------  1034

seq1  CCTCAGTCAACACTGTGAGAATCCGGGTATCAGCTGGGCATGGTGGCGCA  3789
                                                        
seq2  --------------------------------------------------  1034

seq1  CACATTTATTCCCAGCACTTAGGAGGCAGAGGCAGGCGGTATTCTGAGTT  3839
                                                        
seq2  --------------------------------------------------  1034

seq1  CAAGGCCAACCTGGTCTACAGAGTGAATTACAGGACAGGCAGGGCTACAC  3889
                                                        
seq2  --------------------------------------------------  1034

seq1  AGAGAAACCCTGTTTCGGAAAACCAAAAATAAATAAATAAATAAATAAAT  3939
                                                        
seq2  --------------------------------------------------  1034

seq1  AAATAAATAAATAAATAAATAAATAAATAAATCTATATATCAACCAGTAA  3989
                                                        
seq2  --------------------------------------------------  1034

seq1  CCCAGGTATAAAACTCCCACCCAAACAGCACAAACCCAGAAACCAAATCA  4039
                                                        
seq2  --------------------------------------------------  1034

seq1  CCTCAAACACAGAGGCCTAGACACCAGCAAATGAATATAATGAATAATAG  4089
                                                        
seq2  --------------------------------------------------  1034

seq1  CCAGGAAAATATATCACCAAGAAATCCAAGCTATCCTATCACAGCAGGCC  4139
                                                        
seq2  --------------------------------------------------  1034

seq1  CTAGAAATTAAAACATGCAATAGATACAGTGGAGAAATGGTTGTTTGGGG  4189
                                                        
seq2  --------------------------------------------------  1034

seq1  GAAGGGAAAGGAGTGAAAACATGGGGGAAGGTATAGCTGTGCACAAAAGA  4239
                                                        
seq2  --------------------------------------------------  1034

seq1  GCTTTAGACAGGCACACAGACAGAGAGCAGAGAGAGACAGCCACAAGGGT  4289
                                                        
seq2  --------------------------------------------------  1034

seq1  AGGGAAATAGAGGGGGGGGGCGAGCATGTGCAGAGAACAGAGACAGGGAA  4339
                                                        
seq2  --------------------------------------------------  1034

seq1  CAAAGCACAGAGCTGCTGTAGCTGTGGTTCATGTATATAAAGCACACCTG  4389
                                                        
seq2  --------------------------------------------------  1034

seq1  ACAACAGCAGCAGGTGATGGAGACAGGTAACGACTTAAGCATTTGCTAAT  4439
                                                        
seq2  --------------------------------------------------  1034

seq1  TCCCTAAGAGAAAGCCATTGAATTTGCTGTACACTGACAACCACAGAGGC  4489
                                                        
seq2  --------------------------------------------------  1034

seq1  AAGGTTCACCCATGGGCCAGGAAGGGAAGAGAGACTCTCAGGCATTAAAG  4539
                                                        
seq2  --------------------------------------------------  1034

seq1  ATGAATAGAAAACAATGATAAATTGGTCAAAAAATATGGATTCCAAATGT  4589
                                                        
seq2  --------------------------------------------------  1034

seq1  TTCCTGGCACTAAATAACCAGGAATTCTGCAACATATGAGAAGGTGAAAA  4639
                                                        
seq2  --------------------------------------------------  1034

seq1  GTAGAAATTATTGGAATAGAAGAAGAATATCAGCTCAAAGGTCTAGAAAA  4689
                                                        
seq2  --------------------------------------------------  1034

seq1  TATTTTCAGTGAAATCACAAATGAAAAATTTTCTAAAGAAGAAAATACCT  4739
                                                        
seq2  --------------------------------------------------  1034

seq1  ATTAAAGTACAAAATAGCATCCAAAATAGCAAACATATTGGACCAAAAAA  4789
                                                        
seq2  --------------------------------------------------  1034

seq1  GTCTTTGTGCCACAAACTGTCAAAACTCTAAACATATAAAGCAAAGAAAT  4839
                                                        
seq2  --------------------------------------------------  1034

seq1  ATGAAAAACTGCAACAGAAAGAAACTAAAAGCTAAACAAAACAAAAACAA  4889
                                                        
seq2  --------------------------------------------------  1034

seq1  GTAACGTATGGAAGCAGACCTATTAGCTTCATATCTGTCTTCTCAATGTC  4939
                                                        
seq2  --------------------------------------------------  1034

seq1  TACTAGAAAAGACAACAGTGTTTGGACCGTTTTGTGCTGCAGAGTCAAAG  4989
                                                        
seq2  --------------------------------------------------  1034

seq1  AAACCACCCATGTTTCTACAAGAAAGCAACTGGTGCAAATGTTTTGGACA  5039
                                                        
seq2  --------------------------------------------------  1034

seq1  GATTCAGAATCAGCTATGATAATGAAGTTATTCAGAGGTCACTGCCTGAG  5089
                                                        
seq2  --------------------------------------------------  1034

seq1  ACCTCACAGGTGGTCATATTTGGATGATGCTTCCCATGCAGCCCCAGAAA  5139
                                                        
seq2  --------------------------------------------------  1034

seq1  GGACCCACCACCCCAGCTCCCACGGCTCAACAACCTGCCCCTACCCATTG  5189
                                                        
seq2  --------------------------------------------------  1034

seq1  TGGGCAGTGATCCTGTGCTCACCATGTCTAAATCTCAGAACTTCCTGAGG  5239
                                                        
seq2  --------------------------------------------------  1034

seq1  TCCCCTCAATGCACCCGACAGCAGATCTCAGAGCAGGACACAGAGAACCA  5289
                                                        
seq2  --------------------------------------------------  1034

seq1  TTCAAGCCTGCACAGCCACAGCGATCTTGTAGAAAGGCACCCGGAAGATC  5339
                                                        
seq2  --------------------------------------------------  1034

seq1  CCGCCTCTTTGTCTGACAGGCATGTCTCCCTGGAGACCTTGATTGGCCAG  5389
                                                        
seq2  --------------------------------------------------  1034

seq1  TGAGTCTTACCCCTCCTCAATGTTAATGTGTGCTTCCTGTCGAAGACTGG  5439
                                                        
seq2  --------------------------------------------------  1034

seq1  ACTTTTTGCAGATCTCCGGAGCCCTTTTCAGCTCATTAGCATTTGTGCTT  5489
                                                        
seq2  --------------------------------------------------  1034

seq1  GCCCTGGGGGAAGAATCCACCATTCCAGCTCAGGCTGTTCTGCTGCCAGC  5539
                                                        
seq2  --------------------------------------------------  1034

seq1  TCCTCCCCTCTGTGAGCAATGATCCTGACTTCAGACCTTGCCTGAACATT  5589
                                                        
seq2  --------------------------------------------------  1034

seq1  CCTCATAGCACTTGCCTACTTTTTCCTGAAATCAAGGTGAGT  5631
                                                
seq2  ------------------------------------------  1034

seq1: chr13_66204517_66205582
seq2: B6Ng01-267E06.g_69_1158 (reverse)

seq1  AAAATA-TCTTTCATCC--TGTGGGAACAGGGAT-CCAGGAAGGGGTGCA  46
      |||||| ||||||||||  || |||||||||||| || | ||||||||||
seq2  AAAATATTCTTTCATCCATTGGGGGAACAGGGATACCTGAAAGGGGTGCA  50

seq1  GAAGGCAGAGTTGCTATCATGGGA-TACAGAC-TCAGG-AGAC-AAACAC  92
      | | ||||| ||||||| || ||| ||||||| ||||| |||| ||||| 
seq2  GGATGCAGAATTGCTATAATTGGATTACAGACTTCAGGAAGACAAAACAT  100

seq1  TG-AGGTGCATA-TCTGTTGTATTGTGTAGTAG-CA-TCAGGCATTTTTA  138
      || || |||||| |||||||||||||||||||| || |||||||||||||
seq2  TGAAGATGCATATTCTGTTGTATTGTGTAGTAGACATTCAGGCATTTTTA  150

seq1  TACAGCCTTCGG-ACCAATGGGGAATC-CATAAGAGCT-CTGG-GGT-AG  183
      |||||||||||| |||||||||||||| |||||||||| |||| ||| ||
seq2  TACAGCCTTCGGAACCAATGGGGAATCACATAAGAGCTACTGGAGGTAAG  200

seq1  CTAACC--ATT-CCACTATCACTATAGGGA-GGCTAA-CACCAGACAGGA  228
      ||||||  ||| |||||||||||||||||| |||||| ||||||||||||
seq2  CTAACCCAATTCCCACTATCACTATAGGGAGGGCTAACCACCAGACAGGA  250

seq1  CTTCTGTGCAGATGGGG--AAAGCAGCCACCACTGTG-TTTCAGGCCCAA  275
      |||||||||||||||||  |||||||||||||||||| ||||||||||||
seq2  CTTCTGTGCAGATGGGGGAAAAGCAGCCACCACTGTGTTTTCAGGCCCAA  300

seq1  ACTCAGGCTCACTAATTTGCAAGGAT-CCTCTATCTTTTGTTACTCAGTG  324
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTCAGGCTCACTAATTTGCAAGGATCCCTCTATCTTTTGTTACTCAGTG  350

seq1  TACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAGAA  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAGAA  400

seq1  AGGAGC-TTCACTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCAT  423
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTTCACTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCAT  450

seq1  TTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAAGATC  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAAGATC  500

seq1  TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGTAGGCTGAGCAAGCCAG  523
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG  550

seq1  GTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCC  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCC  600

seq1  TGCTTCCTGACCTGCATGAGTTCCAGTCCTGACTTCCTTGGTGATGAACA  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTGACCTGCATGAGTTCCAGTCCTGACTTCCTTGGTGATGAACA  650

seq1  GCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGCTTC  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGCTTC  700

seq1  TTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACACTCAAT  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACACTCAAT  750

seq1  ATGCCACAGACATGCCCATGTCTCATACGGTCAGAGCTGTATGGGAGCCT  773
      ||||||||||||||  ||   |||||||||||||||||||||||||||||
seq2  ATGCCACAGACATGGGCA---CTCATACGGTCAGAGCTGTATGGGAGCCT  797

seq1  CCCTAACTGTCTACCAGGCCCCACCCTGGGACCACAGCACCCACACCATT  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACTGTCTACCAGGCCCCACCCTGGGACCACAGCACCCACACCATT  847

seq1  CATCCTACCACAATTTCTGACTTAGTTTGTCATCTGACTAAAAAGATTAT  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTACCACAATTTCTGACTTAGTTTGTCATCTGACTAAAAAGATTAT  897

seq1  CTAGCTGGGTTATAGTGGTGCATGCCTTTTATCCCAGCACTCAGGAGGCA  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGGGTTATAGTGGTGCATGCCTTTTATCCCAGCACTCAGGAGGCA  947

seq1  GAGGCAAGCATGTCTGTGAGTTAGAGGTCAGCCTGGTCTGCAAAGCAAGT  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGCATGTCTGTGAGTTAGAGGTCAGCCTGGTCTGCAAAGCAAGT  997

seq1  TCTAGGAGAGCTGGGCTGTTACACAGAGAAACCCTGTCATGACAAAAAAA  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGAGCTGGGCTGTTACACAGAGAAACCCTGTCATGACAAAAAAA  1047

seq1  AACATCATTCCATAATGAATATCCTAACACTGATTATGAATTC  1066
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATTCCATAATGAATATCCTAACACTGATTATGAATTC  1090