BAC Information

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BAC

Clone NameB6Ng01-267G14
Chromosome13 (Build37)13 (Build37)
Map Location 65,961,594 - 65,962,14965,892,198 - 65,892,883
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722
Downstream geneLOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267G14.bB6Ng01-267G14.g
ACCGA070537GA070538
length1,1041,133
definitionB6Ng01-267G14.b B6Ng01-267G14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(65,961,594 - 65,962,149)(65,892,198 - 65,892,883)
sequence
gaattctttgttgagctctgtacaccatttttaagtaggtttatttgatt
ttctggagtccagcttcttgagttctttgtatatattggatattagtccc
ctatctgatttaggattggtaaagatcctttcccaatttgttggtggcct
ttttatcttattgacagtgtttgccttacagaaactttgcaattttatga
ggtcccatttgtcaattctcaatcgtacagcccaatccatttctgttctg
ttcagcaattttttccctgtgcccatatcgttgaggcttttccctatttt
ctcctctataagtttcagtatctctggttttatgtggaattccttgatcc
acgtagacttgagctttgtacaaggagacaagaatgaatcattttcattc
cttctacatgataactgccagttgtacctgcaccatttgttgaaaatgct
gtctttttttccactggatggttttagctcccttgtcagtgatcaagtga
ccataggtgtgtgagttcatctctgggtcttcaattctattccatttgat
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagcttcaggtcaggcatggtgattccatcagaggttctttt
atcattgagaatagcttttgctatcctaggttttttgctatttcagatga
atttgcagatttccctttctaattcgatgaagaattgaattggaagtttg
atggagattgcattgaatctgtagattgattttggtaagatagccatttt
tactatatggatcctgccaatccatgagcatgggagatctttccatcttc
tgagatctttcctttatttctttcttcagagactttgaagttcttaccat
acagatctttcactttcttagttagagtcacaccaaggcatttcatatta
tttgtgcctattgtgaagggtgcttgtttcccttatttctttttcatcct
cttttatcctttgtgtagagaaggtccttggcttcactcaatatactgtg
accaagggtacatagtataacactttttcctccacatgtttttctttggc
tatg
gaattcctaaacctgataaacagcttcggtgaagtagctggatataaaat
aaactcaaacaagtcaatggcctttctctacacaaagaataaacaggctg
agaaagaaattagggaaacaaccccttctcaatagtcacaaataatataa
aatatctcggcgtgactctaaggaagtgaaagatctgtatgataaaaact
tcaagtctctgaagaaagaaattaaagaagatctcagaagatggaaagat
ctcccatgctcatggattggcaggatcaacattgtaaaaatggctatctt
gccaaaagcaatctacagattcaatgcaatccccatcaaaattccaactc
aattcttcaacgaattagaaggagcaatttgcaaattcatctggaataac
aaaaaacctaggatagcaaaaactcttctcaaggataaaataacctctgg
tggaatcaccatgcctgacctaaagctttactacagagcaattgtgataa
aaactgcatggtactggtatagagacagacaagtagaccaatggaataga
attgaagacccagaaatgaacccacacacctatggtcacttgatcttcga
caagggagctaaaaccatccagtggaagaaagacagcattttcaacaatt
ggtgctggcacaactggttgttatcatgtagaagaatgcgaatcgatcca
tacttatctccttgtactaagggtcaaatctaagtggatcaaggaacttc
acataaaatcagagacactgaaacttatagaggagaaagtggggaaaagc
cttgaagatatgggcacaggggaaaaattccctgaacagaacagcaatgg
catgtgctgtaagatcgagaattgacaaatgggacctaatgaaactccca
aagtttctgcaaggcaaaagacaccgtcaataagacaaaaagagagaaaa
tgaccctgacctttcaacactgattgtaaagaacatgtgtatgtggtttt
atgtgcatgttttgtgtgtgatattgaactgaaataatctttagtctcat
atttgataaatttatggaggacctccatctagagtgattatatgtccata
gattactgacctcactcttggtgaagtcttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65961594_65962149
seq2: B6Ng01-267G14.b_596_1150

seq1  TCTACCTGTCTGTCGTTGTACCAGTACCATGCAGGTTTTATCACAATTGC  50
      ||||| ||||||||  | |||||||||||||||| |||||||||||||||
seq2  TCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACAATTGC  50

seq1  TCTGTAGTACAGCTTGAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTT  100
      ||||||||||||||| ||||||||||||||||||||| ||||||    ||
seq2  TCTGTAGTACAGCTTCAGGTCAGGCATGGTGATTCCATCAGAGG----TT  96

seq1  CTTTTTTCTTTGGGAATAGCTTTTGCTATCCTAGATTTTTTTTGTTATTC  150
      ||||| || ||| |||||||||||||||||||||   ||||||| |||| 
seq2  CTTTTATCATTGAGAATAGCTTTTGCTATCCTAG--GTTTTTTGCTATTT  144

seq1  CAGATGATTTTGTAAATTGCCCTTTCTAATTTGGTGAAGAATTGAGTTGG  200
      ||||||| |||| | ||| |||||||||||| | ||||||||||| ||||
seq2  CAGATGAATTTGCAGATTTCCCTTTCTAATTCGATGAAGAATTGAATTGG  194

seq1  AATTTTGATGG-GATTGCATTGAATCTGTAGATTGCTTTTGGCAAGATAG  249
      || |||||||| ||||||||||||||||||||||| |||||| |||||||
seq2  AAGTTTGATGGAGATTGCATTGAATCTGTAGATTGATTTTGGTAAGATAG  244

seq1  CCATTTTTACTATATGGATCCTGCCAATCCATGAGCATGGGAGATCTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTACTATATGGATCCTGCCAATCCATGAGCATGGGAGATCTTTC  294

seq1  CATCTTCTGAGATC-TTCTTTGATTTCTTTCTTCAGAGAC-TTGAAGTTC  347
      |||||||||||||| ||| || |||||||||||||||||| |||||||||
seq2  CATCTTCTGAGATCTTTCCTTTATTTCTTTCTTCAGAGACTTTGAAGTTC  344

seq1  TTATCATACAGATCTTTCACTTCCTTAGTTAGAGTCACACCAAGGTATTT  397
      ||| |||||||||||||||||| |||||||||||||||||||||| ||||
seq2  TTACCATACAGATCTTTCACTTTCTTAGTTAGAGTCACACCAAGGCATTT  394

seq1  CATATTATTTGTGCCTATTGTGAAGGGTG-TTGTTTCCCTAATTTCTTTC  446
      ||||||||||||||||||||||||||||| |||||||||| |||||||| 
seq2  CATATTATTTGTGCCTATTGTGAAGGGTGCTTGTTTCCCTTATTTCTTTT  444

seq1  TCATCC-GGTTTATCCTTTGTGTAGAGTATAAAG-CCTTGGCTTCACTCA  494
      ||||||   ||||||||||||||||||   || | |||||||||||||||
seq2  TCATCCTCTTTTATCCTTTGTGTAGAG---AAGGTCCTTGGCTTCACTCA  491

seq1  ATATACTGTGCCCAA-GGTACATAAGTAAATAAACACTTTT--CT-CACA  540
      |||||||||| |||| ||||||| ||||    |||||||||  || ||||
seq2  ATATACTGTGACCAAGGGTACAT-AGTA---TAACACTTTTTCCTCCACA  537

seq1  TG--TTTCTTTGGCTATG  556
      ||  ||||||||||||||
seq2  TGTTTTTCTTTGGCTATG  555

seq1: chr13_65892198_65892883
seq2: B6Ng01-267G14.g_519_1203

seq1  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT  50

seq1  AAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATA  100

seq1  GAATTGAAGACCCAGAAATGAACCCACATACCTATGGTCACTTGATCTTC  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTC  150

seq1  GACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAA  200

seq1  TTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGTGAATCGATC  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATC  250

seq1  CATACTTATCTCCTTGTACTAA-GGTCAAATCTAAGTGGATCAAGGAACT  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATACTTATCTCCTTGTACTAAGGGTCAAATCTAAGTGGATCAAGGAACT  300

seq1  TCACATAAAATCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAAAATCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAA  350

seq1  GCCTTGAAGATATGGGCACAGGGGAAAAATT-CCTGAACAGAACAGCAAT  398
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCCTTGAAGATATGGGCACAGGGGAAAAATTCCCTGAACAGAACAGCAAT  400

seq1  GGCATGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACT-C  447
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCATGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCC  450

seq1  CAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGAGAGAA  497
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGAGAG-A  499

seq1  AAATGACCCTGACC-TTCAACACCTGA-TGTAAAGAACAATGTGTATGT-  544
      |||||||||||||| ||||||| |||| |||||||||| |||||||||| 
seq2  AAATGACCCTGACCTTTCAACA-CTGATTGTAAAGAAC-ATGTGTATGTG  547

seq1  GTTTTATGTGCATG-TTTGTGTGTGATATTGAACTGAAATAATCTTTAGT  593
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTGCATGTTTTGTGTGTGATATTGAACTGAAATAATCTTTAGT  597

seq1  CTCATATTTTGATAAAATTTATGGAGACCCTTCATCTAGAGTGATTTATA  643
      |||||| |||||| ||||||||||||  ||| |||||||||||| |||||
seq2  CTCATA-TTTGAT-AAATTTATGGAGGACCTCCATCTAGAGTGA-TTATA  644

seq1  TGTCCATAGAATTTACTGACCTCACTC-TGGTGAAGTTCTTGTG  686
      ||||||||||  ||||||||||||||| |||||||| |||||||
seq2  TGTCCATAGA--TTACTGACCTCACTCTTGGTGAAG-TCTTGTG  685