BAC Information

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BAC

Clone NameB6Ng01-267L20
Chromosome13 (Build37)
Map Location 9,881,323 - 9,882,509
singlet/doubletsinglet
Overlap geneChrm3
Upstream geneLOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c, LOC666986, Zmynd11
Downstream geneLOC100039604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267L20.bB6Ng01-267L20.g
ACCGA070782GA070783
length1,1881,170
definitionB6Ng01-267L20.b B6Ng01-267L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacggttatgtaagatcaagcggtatttcctcaaagtgtagctg
cttccctttaacaacaaaagcctagcagtcacaggggatgacattgaatg
accttcagaatgtagaaagacagtagataaatcttagatcttacgtaaag
gtcttccctcctctaagaaccctggggacactgcactaattggctccgat
gagaggggtctttctggtgtttgaaaagaattactcatgtttgcttttga
ctccattccatttctctaaaaacactgataaaaaaatgttctaggcctga
aaggtgtttgtggagatccacaactatcctacttagatgtttggtttttt
aggtaaaacggtgttatttcacaagcctcagccaagcctttcacatcctg
ttgtcacggtcaaataaaagcttacgaaaggcagcaatcgggcgggaagt
ctgatacatcatctttttaaaaacaagctttctcccttttaagtggaatt
ttatcccacttttagccttcaggattgttttgttcacaagaagaatcact
gtaccatattaggcaacgtctctcctcctcacagcttgagatgaagatga
gggcttaggttcacaagtttgattccctttaaagacatgtttgagtggaa
agctctgtccaccctgtttgatatcctctgccgaccgacctaccgcgtga
ctgaactaagctgaattccaagtctgtggtcagggacagcaggctgctta
ggcatcttacagcagcaaagttgttctttgagtcaactttgccacctagt
ggcctgatgcgatctttctattcatgatgacatagctgctgagtgttgta
atgaactatgacagaaaacagacacactcctgtccaaagcagagacccaa
aataagccctgaatatgacatataccagatttacaaagaggaaacaccat
gtatctggtcttttcaaaaaaaaatgggttgcaaactgcaaaagacttcc
cacgatttaggaataagaaaaagataattaaagtgaagaatagaattaga
gagcttggagagatgctccatgatgaagagcactgctgctcttgcatggg
acatgggattgaatccagcattcgtgtgtctgatccacagccccagtaac
taagtccgggaagtggaataacctctcctgaactctct
gaattctcacgtataccagcctttgctgtgtaaaccttgctcctcaattt
aaagctattgattaaataaaggggctactggtagggaccacaggaaaaac
aggaggaagaagaaggagagaggagaaggaggaaggaggagaaagtacag
gagttctccatttgacatgatggaacaggaccacatggctgaatgaaatg
ctccctgagaacggactgatggaacagaaataacccgggtgagactcaaa
acagcaaggacttggagagtgcagctggggagtgttaacaagcgagcata
tagaacaatagattaggtaattcacccagaaactgtgctaaagctgattt
ttaaaatccataggacttgtattttcctgatgactaaggatgttgaacat
ttctttaagtgcttctctgtcattccagattcctcagttgagaattctct
gtttagctctgtacccattttttgagttatttggttttctggagtctaac
ctgagttctttgtatattttggatattagccctttatcatctatcagatg
tagggttaataaaaatcttttcccaatctgttggttgtctttttgtccta
tgacagtgtcctttgccttacagaagcttttcagtttcatgaggtcctat
ttgtcaattgttgatcttatatcctgagccattaaagttctgttcaggaa
attctcccctgtgccagtgtgttcaaggctatttcccactttctcttcta
ttagattgttttatgtggaggtcattgatccacttgaacttgagctttgt
acaaagaaataaaaatggatcaatttgcattcttctttatgcaaactgtc
aattagatcagtaccatttgttgaagatgctttccttttgccattgtata
tttttggcttctttgtcaaagatctccataagtgtatgggcttattttgg
ggtcttcatttctatttctatgattaacctggtctgttttctgtaccaac
accgtgcttttggttttatctatctatcactattgccttgtagtacagct
tgaatgtcaagggatgttgattccctcgaaggttccttttaatggctgga
gaattggttggctatcctggataggcttatctgttgtgtggtaattccaa
tagaccaatgggagagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_9881323_9882509
seq2: B6Ng01-267L20.b_50_1237 (reverse)

seq1  AGAGAGGTCAGGAGAGTATA-TCCAATTCCCCGGGACTGTAGTTACAGAG  49
      |||||| |||||||||  || |||| |||||  ||||| ||||||| | |
seq2  AGAGAGTTCAGGAGAGGTTATTCCACTTCCC--GGACT-TAGTTACTG-G  46

seq1  GGCTGTGAACCAG-CACACGGATGCTGGGATTCAAACCCATGTCCCATGC  98
      ||||||| | ||| |||||| ||||| |||||||| ||||||||||||||
seq2  GGCTGTGGATCAGACACACGAATGCT-GGATTCAATCCCATGTCCCATGC  95

seq1  AAGAGCAGCAAGTGCTCTCAACCATGGAGCCATCTCTCC-AGCTCTCTAA  147
      ||||||||| ||||||||  | ||||||| ||||||||| ||||||||||
seq2  AAGAGCAGC-AGTGCTCTTCATCATGGAG-CATCTCTCCAAGCTCTCTAA  143

seq1  TTCTA-TCTCCACTTTAATTATTCTTTTTCTTA-TCCT-AATCGTGGGAA  194
      ||||| ||| ||||||||||| ||||||||||| |||| |||||||||||
seq2  TTCTATTCTTCACTTTAATTA-TCTTTTTCTTATTCCTAAATCGTGGGAA  192

seq1  GTCTTTTGCAGTTTGCAA-CCATTTTTTTT--GAAAGACCAGATACATGG  241
      |||||||||||||||||| |||||||||||   |||||||||||||||||
seq2  GTCTTTTGCAGTTTGCAACCCATTTTTTTTTGAAAAGACCAGATACATGG  242

seq1  TGTTTCCTCTTTGTAAATCTGGTATATGTCATATTCAGGGCTTATTTTGG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCTTTGTAAATCTGGTATATGTCATATTCAGGGCTTATTTTGG  292

seq1  GTCTCTGCTTTGGACAGGAGTGTGTCTGTTTTCTGTCATAGTTCATTACA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTTTGGACAGGAGTGTGTCTGTTTTCTGTCATAGTTCATTACA  342

seq1  ACACTCAGCAGCTATGTCATCATGAATAGAAAGATCGCATCAGGCCACTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGCAGCTATGTCATCATGAATAGAAAGATCGCATCAGGCCACTA  392

seq1  GGTGGCAAAGTTGACTCAAAGAACAACTTTGCTGCTGTAAGATGCCTAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAAAGTTGACTCAAAGAACAACTTTGCTGCTGTAAGATGCCTAAG  442

seq1  CAGCCTGCTGTCCCTGACCACAGACTTGGAATTCAGCTTAGTTCAGTCAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCTGTCCCTGACCACAGACTTGGAATTCAGCTTAGTTCAGTCAC  492

seq1  GCGGTAGGTCGGTCGGCAGAGGATATCAAACAGGGTGGACAGAGCTTTCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTAGGTCGGTCGGCAGAGGATATCAAACAGGGTGGACAGAGCTTTCC  542

seq1  ACTCAAACATGTCTTTAAAGGGAATCAAACTTGTGAACCTAAGCCCTCAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAACATGTCTTTAAAGGGAATCAAACTTGTGAACCTAAGCCCTCAT  592

seq1  CTTCATCTCAAGCTGTGAGGAGGAGAGACGTTGCCTAATATGGTACAGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTCAAGCTGTGAGGAGGAGAGACGTTGCCTAATATGGTACAGTG  642

seq1  ATTCTTCTTGTGAACAAAACAATCCTGAAGGCTAAAAGTGGGATAAAATT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTGTGAACAAAACAATCCTGAAGGCTAAAAGTGGGATAAAATT  692

seq1  CCACTTAAAAGGGAGAAAGCTTGTTTTTAAAAAGATGATGTATCAGACTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAAAAGGGAGAAAGCTTGTTTTTAAAAAGATGATGTATCAGACTT  742

seq1  CCCGCCCGATTGCTGCCTTTCGTAAGCTTTTATTTGACCGTGACAACAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCGATTGCTGCCTTTCGTAAGCTTTTATTTGACCGTGACAACAGG  792

seq1  ATGTGAAAGGCTTGGCTGAGGCTTGTGAAATAACACCGTTTTACCTAAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAGGCTTGGCTGAGGCTTGTGAAATAACACCGTTTTACCTAAAA  842

seq1  AACCAAACATCTAAGTAGGATAGTTGTGGATCTCCACAAACACCTTTCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACATCTAAGTAGGATAGTTGTGGATCTCCACAAACACCTTTCAG  892

seq1  GCCTAGAACATTTTTTTATCAGTGTTTTTAGAGAAATGGAATGGAGTCAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAACATTTTTTTATCAGTGTTTTTAGAGAAATGGAATGGAGTCAA  942

seq1  AAGCAAACATGAGTAATTCTTTTCAAACACCAGAAAGACCCCTCTCATCG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACATGAGTAATTCTTTTCAAACACCAGAAAGACCCCTCTCATCG  992

seq1  GAGCCAATTAGTGCAGTGTCCCCAGGGTTCTTAGAGGAGGGAAGACCTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAATTAGTGCAGTGTCCCCAGGGTTCTTAGAGGAGGGAAGACCTTT  1042

seq1  ACGTAAGATCTAAGATTTATCTACTGTCTTTCTACATTCTGAAGGTCATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAGATCTAAGATTTATCTACTGTCTTTCTACATTCTGAAGGTCATT  1092

seq1  CAATGTCATCCCCTGTGACTGCTAGGCTTTTGTTGTTAAAGGGAAGCAGC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCATCCCCTGTGACTGCTAGGCTTTTGTTGTTAAAGGGAAGCAGC  1142

seq1  TACACTTTGAGGAAATACCGCTTGATCTTACATAACCGTGGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTGAGGAAATACCGCTTGATCTTACATAACCGTGGAATTC  1188