BAC Information

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BAC

Clone NameB6Ng01-267N22
Chromosome13 (Build37)
Map Location 113,136,006 - 113,340,669
singlet/doubletdoublet
Overlap geneAnkrd55, LOC100040725, Il6st, Il31ra
Upstream geneLOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1, LOC668181, LOC100040716, LOC100041161, LOC100041175
Downstream geneLOC100041240, Ddx4, 9130023D20Rik, Ppap2a, LOC100041282, Skiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267N22.bB6Ng01-267N22.g
ACCGA070878GA070879
length591177
definitionB6Ng01-267N22.b B6Ng01-267N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,340,074 - 113,340,669)(113,136,006 - 113,136,182)
sequence
attcaaatcaacacatctccctaccctctttctgtcatctatcgtctctc
taatctgtcttttatctgttatctccctgtatgcatagctacctagctta
atgagtttttaaaaacactataggcatatgataaaaaaaattcagcttga
aacatacaaattctttgttgcattgtcaaaaggcaatcatttaagcattt
ttatgaagagctttccaagcacctgtgacacatcacataaatatgttttt
ctaaaatggtgattattctgcacatgatatatatcctgaattagaagata
aggtattttaaatattagttacatttgcaataatttatttagcaaatcct
ctggtgttttaaatttgggggtgggggaggagacagggtttctctgtgta
actctgtcatggaacttactgtagagcaggctagcttcgaactcacagaa
atctgcctgtctctgccaacaaagtgctgagattaaaagcatgcaccacc
actgacagccttgaaaggatgaattcttaaggatctagcttcaatatttt
gatttctaatatggaatttaaacaatctgttgattatttct
ccatgtgcttaaatcataattctatatagtccttgctatctattacacat
ttcctttccggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtacgtatgcatgcttgtgtgcatgtatgtgcatatgtgtgtcaaa
aatggggtccccaagtggggattttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_113340074_113340669
seq2: B6Ng01-267N22.b_47_643 (reverse)

seq1  AGAAATAATCAACAGATTGTTTAAATTCCATATTAG-AATCAAAATATTG  49
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAAATAATCAACAGATTGTTTAAATTCCATATTAGAAATCAAAATATTG  50

seq1  AAGCTAGATCCTTAAGAATTCATCCTTTCAAGGCTGTCAGTGGTGGTGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGATCCTTAAGAATTCATCCTTTCAAGGCTGTCAGTGGTGGTGCA  100

seq1  TGCTTTTAATCTCAGCACTCTGTTGGCAGAGACAGGCAGATTTCTGTGAG  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCTTTTAATCTCAGCACTTTGTTGGCAGAGACAGGCAGATTTCTGTGAG  150

seq1  TTCGAAGCTAGCCTGCTCTACAGTAAGTTCCATGACAGAGTTACACAGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGCTAGCCTGCTCTACAGTAAGTTCCATGACAGAGTTACACAGAG  200

seq1  AAACCCTGTCTCCTCCCCCACCCCCAAATTTAAAACACCAGAGGATTTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCCTCCCCCACCCCCAAATTTAAAACACCAGAGGATTTGC  250

seq1  TAAATAAATTATTGCAAATGTAACTAATATTTAAAATACCTTATCTTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATTATTGCAAATGTAACTAATATTTAAAATACCTTATCTTCTA  300

seq1  ATTCAGGATATATATCATGTGCAGAATAATCACCATTTTAGAAAAACATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGATATATATCATGTGCAGAATAATCACCATTTTAGAAAAACATA  350

seq1  TTTATGTGATGTGTCACAGGTGCTTGGAAAGCTCTTCATAAAAATGCTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGATGTGTCACAGGTGCTTGGAAAGCTCTTCATAAAAATGCTTA  400

seq1  AATGATTGCCTTTTGACAATGCAACAAAGAATTTGTATGTTTCAAGCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGCCTTTTGACAATGCAACAAAGAATTTGTATGTTTCAAGCTGA  450

seq1  ATTTTTTTTATCATATGCCTATAGTGTTTTTAAAAACTCATTAAGCTAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTATCATATGCCTATAGTGTTTTTAAAAACTCATTAAGCTAGG  500

seq1  TAGCTATGCATACAGGGAGATAACAGATAAAAGACAGATTAGAGAGACGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGCATACAGGGAGATAACAGATAAAAGACAGATTAGAGAGACGA  550

seq1  TAGATGACAGAAAGAGGGTAGGGAGATGTGTTGATTTGAATGAATTC  596
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACAGAAAGAGGGTAGGGAGATGTGTTGATTTGAATGAATTC  597

seq1: chr13_113136006_113136182
seq2: B6Ng01-267N22.g_72_248

seq1  CCATGTGCTTAAATCATAATTCTATATAGTCCTTGCTATCTATTACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGCTTAAATCATAATTCTATATAGTCCTTGCTATCTATTACACAT  50

seq1  TTCCTTTCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTACAGATTCATGCTTTTGTGCATGTATGTGCATATGTGGGTCAAA  150
      ||||||||  || ||||||| |||||||||||||||||||||| ||||||
seq2  GTGTGTACGTATGCATGCTTGTGTGCATGTATGTGCATATGTGTGTCAAA  150

seq1  AATGGGGTCCCCAAGTGGGGAGTTTGA  177
      ||||||||||||||||||||| |||||
seq2  AATGGGGTCCCCAAGTGGGGATTTTGA  177