BAC Information

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BAC

Clone NameB6Ng01-268E05
Chromosome13 (Build37)
Map Location 95,528,776 - 95,723,438
singlet/doubletdoublet
Overlap geneTbca, Otp
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneWdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268E05.bB6Ng01-268E05.g
ACCGA071167GA071168
length1711,105
definitionB6Ng01-268E05.b B6Ng01-268E05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,723,268 - 95,723,438)(95,528,776 - 95,529,882)
sequence
agtgagccacaaacttgctaggtagaccaggttagttcttaatccacaga
gatctgcctgtctctgcctcctgagtgctgggattaaaggtgtgtgtcac
caagattttaagccctaagattttaaaattatgaggttgagtgagtaggg
gatgtaggaggttagggtagg
gaattcatagcaaacaatgtgttcagttggaaagaaaagcgagagaaacc
catgagcagtagagctgcgtgtgtttgcatcaccatgggctccataccta
agcagcttggtcaagagcccgcctatatttttgcttctctctgaaagcca
ataaatccccaaacaccaccattacagtaaaacaagctgcagagtccgag
gatggatttcctggaaggatgacagaggtgttctcatggcaccacgtgca
tactgcagaacttgctgagaaatcaaatgtcacagggttcctgctttgcc
ttgaggggagacttggaaaggtattccagagaggagagagcatggccgga
aggggagagagctcactccagcaatcccaagacttactggatgggcagga
acatttccacgagtgtatgtatgtgtatatgtgcatgctgttgttcactt
ctgggaagatcctggagctgcctgaggacagaggggagaagcctgagggc
agaggagagaagcctgagggcagaggggagaagcctgagggcagagggga
gaagcctgagggcagaggagagaagcctgaggacagaggggagaagcctg
aggacagaggggagaagcctgaggacaaattttgaacagtttgaagtcag
ggttgcctctgagagaacctggatagaaggatagaaaaattaaggtacac
aggaccagaaaggaggctgttggttgagtccagatgaagcctcttgctag
ctgagaatcaagaattctagcacaattaaagttggcaatgaagctttctt
acgtagagacaaccatgagtctgggaatgaatggagtaagagaacacagg
ctgttaacttgagcttggttggtaatgagaaggatcccaaagccttcgac
caaggaagaatggtgaaagccttccctgggtcagattcagggaaatggcc
aaccttctcctggtcctcacgacacagcttccttcttccgatattttaca
acctgagctactcccttgcgcccaggcctcttcttccagctgcatacagt
aaacttccacttctcaattccacaggcttgaaacaacgtgcaagagaccc
ctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95723268_95723438
seq2: B6Ng01-268E05.b_51_221 (reverse)

seq1  CCTACCCTAACCTCCTACATCCCCTACTCACTCAACCTCATAATTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTAACCTCCTACATCCCCTACTCACTCAACCTCATAATTTTAAA  50

seq1  ATCTTAGGGCTTAAAATCTTGGTGACACACACCTTTAATCCCAGCACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGGCTTAAAATCTTGGTGACACACACCTTTAATCCCAGCACTCA  100

seq1  GGAGGCAGAGACAGGCAGATCTCTGTGGATTAAGAACTAACCTGGTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAGACAGGCAGATCTCTGTGGATTAAGAACTAACCTGGTCTAC  150

seq1  CTAGCAAGTTTGTGGCTCACT  171
      |||||||||||||||||||||
seq2  CTAGCAAGTTTGTGGCTCACT  171

seq1: chr13_95528776_95529882
seq2: B6Ng01-268E05.g_67_1171

seq1  GAATTCATAGCAAACAATGTGTTCAGTTGGAAAGAAAAGCGAGAGAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCAAACAATGTGTTCAGTTGGAAAGAAAAGCGAGAGAAACC  50

seq1  CATGAGCAGTAGAGCTGCGTGTGTTTGCATCACCATGGGCTCCATACCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAGTAGAGCTGCGTGTGTTTGCATCACCATGGGCTCCATACCTA  100

seq1  AGCAGCTTGGTCAAGAGCCCGCCTATATTTTTGCTTCTCTCTGAAAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTGGTCAAGAGCCCGCCTATATTTTTGCTTCTCTCTGAAAGCCA  150

seq1  ATAAATCCCCAAACACCACCATTACAGTAAAACAAGCTGCAGAGTCCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCCCAAACACCACCATTACAGTAAAACAAGCTGCAGAGTCCGAG  200

seq1  GATGGATTTCCTGGAAGGATGACAGAGGTGTTCTCATGGCACCACGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATTTCCTGGAAGGATGACAGAGGTGTTCTCATGGCACCACGTGCA  250

seq1  TACTGCAGAACTTGCTGAGAAATCAAATGTCACAGGGTTCCTGCTTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGAACTTGCTGAGAAATCAAATGTCACAGGGTTCCTGCTTTGCC  300

seq1  TTGAGGGGAGACTTGGAAAGGTATTCCAGAGAGGAGAGAGCATGGCCGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGGAGACTTGGAAAGGTATTCCAGAGAGGAGAGAGCATGGCCGGA  350

seq1  AGGGGAGAGAGCTCACTCCAGCAATCCCAAGACTTACTGGATGGGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGAGAGCTCACTCCAGCAATCCCAAGACTTACTGGATGGGCAGGA  400

seq1  ACATTTCCACGAGTGTATGTATGTGTATATGTGCATGCTGTTGTTCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCACGAGTGTATGTATGTGTATATGTGCATGCTGTTGTTCACTT  450

seq1  CTGGGAAGATCCTGGAGCTGCCTGAGGACAGAGGGGAGAAGCCTGAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGATCCTGGAGCTGCCTGAGGACAGAGGGGAGAAGCCTGAGGGC  500

seq1  AGAGGAGAGAAGCCTGAGGGCAGAGGGGAGAAGCCTGAGGGCAGAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAGAAGCCTGAGGGCAGAGGGGAGAAGCCTGAGGGCAGAGGGGA  550

seq1  GAAGCCTGAGGGCAGAGGAGAGAAGCCTGAGGACAGAGGGGAGAAGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGAGGGCAGAGGAGAGAAGCCTGAGGACAGAGGGGAGAAGCCTG  600

seq1  AGGACAGAGGGGAGAAGCCTGAGGACAAATTTTGAACAGTTTGAAGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGAGGGGAGAAGCCTGAGGACAAATTTTGAACAGTTTGAAGTCAG  650

seq1  GGTTGCCTCTGAGAGAACCTGGATAGAAGGATAGAAAAATTAAGGTACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCTCTGAGAGAACCTGGATAGAAGGATAGAAAAATTAAGGTACAC  700

seq1  AGGACCAGAAAGGAGGCTGTTGGTTGAGTCCAGATGAAGCCTCTTGCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGAAAGGAGGCTGTTGGTTGAGTCCAGATGAAGCCTCTTGCTAG  750

seq1  CTGAGAATCAAGAATTCTAGCACAATTAAGGTTGGCAATGAAGCTTTCTT  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGAGAATCAAGAATTCTAGCACAATTAAAGTTGGCAATGAAGCTTTCTT  800

seq1  ACGTAGAGACAACCATGAGTCTGGGAATGAATGGAGTAAGAGAACACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAGAGACAACCATGAGTCTGGGAATGAATGGAGTAAGAGAACACAGG  850

seq1  CTGTTAACTTGAGCTTGGTTGGTAATGAGAAGGATCCCAAAGCCTTCGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACTTGAGCTTGGTTGGTAATGAGAAGGATCCCAAAGCCTTCGAC  900

seq1  CAAGG-AGAATGGTGAAAGCCTTCCCTGGGTCAGATTCAGGGAAATGGCA  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAAGGAAGAATGGTGAAAGCCTTCCCTGGGTCAGATTCAGGGAAATGGCC  950

seq1  AACCTTCTCCTGGTCCTCACGACCACAGCTTCCTTCTTCCGGATA-TTTA  998
      |||||||||||||||||||||| ||||||||||||||||| |||| ||||
seq2  AACCTTCTCCTGGTCCTCACGA-CACAGCTTCCTTCTTCC-GATATTTTA  998

seq1  CAACCTGAGGCTACTCCCCTTGCGCCCCAGGCCTCTTCTTCCAGCTGCAT  1048
      |||||||| |||||| |||||||| |||||||||||||||||||||||||
seq2  CAACCTGA-GCTACT-CCCTTGCG-CCCAGGCCTCTTCTTCCAGCTGCAT  1045

seq1  ACAGTAAACT--CACTTCTTCAATT-CACAGGCCTGAAACAAACGTGCAG  1095
      ||||||||||  |||||| |||||| ||||||| |||||| |||||||| 
seq2  ACAGTAAACTTCCACTTC-TCAATTCCACAGGCTTGAAAC-AACGTGCAA  1093

seq1  AGGACCCCTGCT  1107
        ||||||||||
seq2  GAGACCCCTGCT  1105