BAC Information

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BAC

Clone NameB6Ng01-268H21
Chromosome13 (Build37)
Map Location 17,082,386 - 17,195,439
singlet/doubletdoublet
Overlap gene5033411D12Rik
Upstream geneInhba, LOC625181, LOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268H21.bB6Ng01-268H21.g
ACCGA071333GA071334
length3931,137
definitionB6Ng01-268H21.b B6Ng01-268H21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,195,041 - 17,195,439)(17,082,386 - 17,083,498)
sequence
cagaaaggaaaggccgtgatcttagacttaactgccctcctgttttcacc
tctctttcttcctcctttccttccttacatttcctctcttttcatctact
aattgttgacataacaagagtgttctttgcaggttagaaagaacatatca
acctacattccaacacagaagacttaatttcaaaatatggccttattttc
aggtattttcaactttgtcaattaacatttcacaagatgtgtatggtatg
tgttgggatgagggtcatgtgtagggtaggtgtctaatggtgtatatatg
tgttcttgtggtatatgtgtgctatattataatgtctatgtgatgtgttt
catgtgtatacgcgtgtgtattctgtgagtatgtgtgcatgta

gaattctaagcctataagccagcatctatattgttgaacatgtatgaaaa
aattatattcatataaaatctacacatgaatattcatagtagttttctgt
aataatcaaaattagaaacatagagatgtctttggcaaatattccacaat
atggagtaattcttagcagtaaaaaggaacaaacaaatttacacaaaaac
ctacatgactctttagagggtcatataagagagaaaagccagtttgaggt
ggttttatagtaagggacccatttccatagcattcaatgatgacaaatct
aaacatggagaatttgggagagagttgagagtgctggaaagcggggagag
gggctctacagctattaaaaaagcaacaaggaaaccttgcaagtggtgaa
atggtctttgtcttgactaatatgctggccctgatgttacaggatgattt
cacatgatgttgtcattggagaaatggcattaatggtatgttgaacctct
gtattatgtcttaaccgctgcatatgaatttccatttaatttggtatgat
agagagttggattttccttttctctgagtgattcctgagcagcctttcct
ctcagtgactctagcaccaatcctgctatctatcagtcattctgtgatgg
gcttatttctggcttgttggtctatgactttcctgccaggtccacaatga
ctaaattactgtggctttgcagtgagtctcagtgttacatttggcaagat
ctatgacctgcccctgacttatcctttgtcctgaggggttcttggcccct
aactcttctctataaatctcaaagtttgcttatccaagtccaggaaatcc
ctatcgggcagaaagaatattcttaccatattatcttactcccattaaac
atttactttagcatttccatttatttagtcatccttatattttataaagt
gttagtatttttaataaagctttgtatatttttccattagtgccttagag
tacattgtagctgcttgggagaagttaaactttttgtatttcatttttcg
gcttttgctgatgaaataatttttaatagctttttaaaatatggcaatct
tacaataatattgttattacctctcgagttgctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17195041_17195439
seq2: B6Ng01-268H21.b_46_444 (reverse)

seq1  TACATGCACACATACTCACAGAATACACACACGTATACACATGAAACACA  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACATGCACACATACTCACAGAATACACACGCGTATACACATGAAACACA  50

seq1  TCACATAGACATTATAATATAGCACACATATACCACAAGAACACATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGACATTATAATATAGCACACATATACCACAAGAACACATATAT  100

seq1  ACACCATTAGACACCTACCCTACACATGACCCTCATCCCAACACATACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTAGACACCTACCCTACACATGACCCTCATCCCAACACATACCA  150

seq1  TACACATCTTGTGAAATGTTAATTGACAAAGTTGAAAATACCTGAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCTTGTGAAATGTTAATTGACAAAGTTGAAAATACCTGAAAATA  200

seq1  AGGCCATATTTTGAAATTAAGTCTTCTGTGTTGGAATGTAGGTTGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATATTTTGAAATTAAGTCTTCTGTGTTGGAATGTAGGTTGATATG  250

seq1  TTCTTTCTAACCTGCAAAGAACACTCTTGTTATGTCAACAATTAGTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTAACCTGCAAAGAACACTCTTGTTATGTCAACAATTAGTAGAT  300

seq1  GAAAAGAGAGGAAATGTAAGGAAGGAAAGGAGGAAGAAAGAGAGGTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGAGGAAATGTAAGGAAGGAAAGGAGGAAGAAAGAGAGGTGAAA  350

seq1  ACAGGAGGGCAGTTAAGTCTAAGATCACGGCCTTTCCTTTCTGGAATTC  399
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGGCAGTTAAGTCTAAGATCACGGCCTTTCCTTTCTGGAATTC  399


seq1: chr13_17082386_17083498
seq2: B6Ng01-268H21.g_105_1199

seq1  TATGAAAAAATTATATTCATATAAAATCTACACATGAATATTCATAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAAATTATATTCATATAAAATCTACACATGAATATTCATAGTAG  50

seq1  TTTTCTGTAATAATCAAAATTAGAAACATAGAGATGTCTTTGGCAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTAATAATCAAAATTAGAAACATAGAGATGTCTTTGGCAAATAT  100

seq1  TCCACAATATGGAGTAATTCTTAGCAGTAAAAAGGAACAAACAAATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATATGGAGTAATTCTTAGCAGTAAAAAGGAACAAACAAATTTAC  150

seq1  ACAAAAACCTACATGACTCTTTAGAGGGTCATATAAGAGAGAAAAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACCTACATGACTCTTTAGAGGGTCATATAAGAGAGAAAAGCCAG  200

seq1  TTTGAGGTGGTTTTATAGTAAGGGACCCATTTCCATAGCATTCAATGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTGGTTTTATAGTAAGGGACCCATTTCCATAGCATTCAATGATG  250

seq1  ACAAATCTAAACATGGAGAATTTGGGAGAGAGTTGAGAGTGCTGGAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTAAACATGGAGAATTTGGGAGAGAGTTGAGAGTGCTGGAAAGC  300

seq1  GGGGAGAGGGGCTCTACAGCTATTAAAAAAGCAACAAGGAAACCTTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGGGGCTCTACAGCTATTAAAAAAGCAACAAGGAAACCTTGCAA  350

seq1  GTGGTGAAATGGTCTTTGTCTTGACTAATATGCTGGCCCTGATGTTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAAATGGTCTTTGTCTTGACTAATATGCTGGCCCTGATGTTACAG  400

seq1  GATGATTTCACATGATGTTGTCATTGGAGAAATGGCATTAATGGTATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTCACATGATGTTGTCATTGGAGAAATGGCATTAATGGTATGTT  450

seq1  GAACCTCTGTATTATGTCTTAACCGCTGCATATGAATTTCCATTTAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTGTATTATGTCTTAACCGCTGCATATGAATTTCCATTTAATTT  500

seq1  GGTATGATAGAGAGTTGGATTTTCCTTTTCTCTGAGTGATTCCTGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGATAGAGAGTTGGATTTTCCTTTTCTCTGAGTGATTCCTGAGCAG  550

seq1  CCTTTCCTCTCAGTGACTCTAGCACCAATCCTGCTATCTATCAGTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTCTCAGTGACTCTAGCACCAATCCTGCTATCTATCAGTCATTC  600

seq1  TGTGATGGGCTTATTTCTGGCTTGTTGGTCTATGACTTTCCTGCCAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGGGCTTATTTCTGGCTTGTTGGTCTATGACTTTCCTGCCAGGTC  650

seq1  CACAATGACTAAATTACTGTGGCTTTGCAGTGAGTCTCAGTGTTACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGACTAAATTACTGTGGCTTTGCAGTGAGTCTCAGTGTTACATTT  700

seq1  GGCAAGATCTATGACCTGCCCCTGACTTATCCTTTGTCCTGAGGGGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGATCTATGACCTGCCCCTGACTTATCCTTTGTCCTGAGGGGTTCT  750

seq1  TGGCCCCTAACTCTTCTCTATAAATCTCAAAGTTTGCTTATCCAAGTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCTAACTCTTCTCTATAAATCTCAAAGTTTGCTTATCCAAGTCCA  800

seq1  GGAAATCCCTATCGGGCAGAAAGAATATTCTTACCATATTATCTTACTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCCTATCGGGCAGAAAGAATATTCTTACCATATTATCTTACTCC  850

seq1  CATTAAACATTTACTTTAGCAATTTCCATTTATTTAAGTCATCCTTAATA  900
      |||||||||||||||||||| |||||||||||||| |||||||||| |||
seq2  CATTAAACATTTACTTTAGC-ATTTCCATTTATTT-AGTCATCCTT-ATA  897

seq1  TTTTATAAAGTGTTAGTATTTTTAATAAAAGCTTTGTATATTTTTCCATT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTATAAAGTGTTAGTATTTTTAAT-AAAGCTTTGTATATTTTTCCATT  946

seq1  AGGTGCCTTAGAAGTACATTGTAGCTGCTTGGGAAGAAGTTAAAC-TTTT  999
      | ||||||||| ||||||||||||||||||||| ||||||||||| ||||
seq2  A-GTGCCTTAG-AGTACATTGTAGCTGCTTGGG-AGAAGTTAAACTTTTT  993

seq1  GTATTTCAATTTTTCGGGCTTTTGCTGATGAAATTAATTTTTTAAATAGT  1049
      ||||||| ||||||| ||||||||||||||||| ||||||||  ||||| 
seq2  GTATTTC-ATTTTTC-GGCTTTTGCTGATGAAA-TAATTTTT--AATAGC  1038

seq1  TTTTTAAAATATGGCAAAAATTCCTAACAATAATA-TGTTAATACACTTC  1098
      |||||||||||||||||      || ||||||||| ||||| |  || ||
seq2  TTTTTAAAATATGGCAA-----TCTTACAATAATATTGTTATT--ACCTC  1081

seq1  TCGAGTTTTCTGTAA  1113
      ||||| || ||||||
seq2  TCGAG-TTGCTGTAA  1095


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