BAC Information

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BAC

Clone NameB6Ng01-268J03
Chromosome13 (Build37)
Map Location 20,849,790 - 20,850,361
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr141, LOC432730, Elmo1, LOC100040226, LOC665381, LOC665386
Downstream geneAoah, Olfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268J03.bB6Ng01-268J03.g
ACCGA071393GA071394
length509965
definitionB6Ng01-268J03.b B6Ng01-268J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tggggaccattgagagggtataaaaatgccagagctcccctgctgctgct
ggtttctgctgctgcatttaatgtttgctggattgctcggtgcttgttgg
agatgtcctgatgacaaagattggacttgcaggaaggaatgcaacactgt
taatcagcaggaagtagtctaaagagatctacaacccctttctcctccaa
tcttcttcctcacccacctagtgttgggaggttgcaagggattaggatga
agaaagatggcagatattagaactcaacaaagtagcccaaaagtactaag
ttccacttagataatgatctaaatcacctcttccttttgttttgttttgt
tttgttttgttttgttttgttttgttgttttgttttggtttggtttggtt
tggttggcataatttccctccttgtgttggtattttctgtctattaccct
ttgtaggggtggatttttggaaagatattgtgttaattggttttgtccgg
aatatcagc
gaattcagttttgtcccagcaaagtaaattttactcctgagaaggctaag
ctcagcaaactgtctactaacactaggttgtttccagtttctgactaata
caaataaagctgccatggacatagttgagcaagtgtccttgtgggatgga
ggaatatctttgtgtttatgcctgggagtggtatagctgggtattgaggt
agaacttttcacaattttctgagaaactgccaaattgatttccaaggtag
ttttacaagtttgcactcccaccagcaatggagaaatgttcccccttgct
ccacattctcactagcatgttctgtcacttgagtttttgatcttaaccat
tctgacagtgtaaaatagattctcagagtcattttgatttgtgcttcctt
gatgactaaggtcattgaacagttctttaagtctctctcagctactaatg
agtcctttgttgagaactctctgtttagctctgtaccccatttttaaatt
gagttatttggtttgttggtgtaatttcttgaattctttatctttttttt
tttttttttggatattagcctctgtctgatgtagggttgataaagatctt
ttcccattctgtaggctgcctttttgtcctaacagtgtcctttgccttac
agaaccttttcagttacatgaggtttcatttattaactgttgcttgtagt
gcctgagctgttgctcttcttgttcattgtatctagttttatgttgaggc
ctctgatccacttggacctgcatcgtcgactaggaaaggatgcaaaaaag
gaagttaccattatcctgtttatgtaactaaagcacacaagtcataaatt
gtgctgcctgtcttgacataatttaacaataagagcttggcccactcttt
ttgtcccctttagctttctaattctggtgtgggagggtataaagatgatc
ttgtcttcttttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_20849790_20850361
seq2: B6Ng01-268J03.g_65_636

seq1  GAATTCAGTTTTGTCCCAGCAAAGTAAATTTTACTCCTGAGAAGGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTGTCCCAGCAAAGTAAATTTTACTCCTGAGAAGGCTAAG  50

seq1  CTCAGCAAACTGTCTACTAACACTAGGTTGTTTCCAGTTTCTGACTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAAACTGTCTACTAACACTAGGTTGTTTCCAGTTTCTGACTAATA  100

seq1  CAAATAAAGCTGCCATGGACATAGTTGAGCAAGTGTCCTTGTGGGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAGCTGCCATGGACATAGTTGAGCAAGTGTCCTTGTGGGATGGA  150

seq1  GGAATATCTTTGTGTTTATGCCTGGGAGTGGTATAGCTGGGTATTGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATCTTTGTGTTTATGCCTGGGAGTGGTATAGCTGGGTATTGAGGT  200

seq1  AGAACTTTTCACAATTTTCTGAGAAACTGCCAAATTGATTTCCAAGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTTCACAATTTTCTGAGAAACTGCCAAATTGATTTCCAAGGTAG  250

seq1  TTTTACAAGTTTGCACTCCCACCAGCAATGGAGAAATGTTCCCCCTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAGTTTGCACTCCCACCAGCAATGGAGAAATGTTCCCCCTTGCT  300

seq1  CCACATTCTCACTAGCATGTTCTGTCACTTGAGTTTTTGATCTTAACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTCTCACTAGCATGTTCTGTCACTTGAGTTTTTGATCTTAACCAT  350

seq1  TCTGACAGTGTAAAATAGATTCTCAGAGTCATTTTGATTTGTGCTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGTGTAAAATAGATTCTCAGAGTCATTTTGATTTGTGCTTCCTT  400

seq1  GATGACTAAGGTCATTGAACAGTTCTTTAAGTCTCTCTCAGCTACTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTAAGGTCATTGAACAGTTCTTTAAGTCTCTCTCAGCTACTAATG  450

seq1  AGTCCTTTGTTGAGAACTCTCTGTTTAGCTCTGTACCCCATTTTTAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTGTTGAGAACTCTCTGTTTAGCTCTGTACCCCATTTTTAAATT  500

seq1  GAGTTATTTGGTTTGTTGGTGTAATTTCTTGAATTCTTTATCTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTTGGTTTGTTGGTGTAATTTCTTGAATTCTTTATCTTTTTTTT  550

seq1  TTTTTTTTTGGATATTAGCCTC  572
      ||||||||||||||||||||||
seq2  TTTTTTTTTGGATATTAGCCTC  572