BAC Information

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BAC

Clone NameB6Ng01-268L06
Chromosome13 (Build37)
Map Location 6,958,946 - 7,095,439
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268L06.bB6Ng01-268L06.g
ACCGA071491GA071492
length8091,110
definitionB6Ng01-268L06.b B6Ng01-268L06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,094,631 - 7,095,439)(6,958,946 - 6,959,651)
sequence
gaattcccttgactctggccctgcagccccagcactgaagatacagatac
aacgtataggttaactttttctccgtgagtgctagggatcctaacctagt
ccttcatgcttctcatccttatatcaggagtcttcagaatgagagctgtc
tcgacaggccactcagtgtcacactgcttcctggctggatcttaccgttg
tctaaccttttgcctaatgctttccttttttttttctttctttttttctt
ttttgaaattcaaatataatcccataatctccatcttccctgtccacact
ccatcttctcccataatccctctcactttccttttcaaaccttctgctcg
ccttcctgcctctttatcccattgttcttccttgcttccaggaatctcca
gctgcgcagcctcttcctgctctaccgcaaaatccaaggaagcctaacag
atccacctggagaatgtgataaaagctgtggaaaaaaaaactgtcttgca
gaaacagctcaggagggaggacttgcttggtctcatggtttaggagggtt
cagctcactatgaccctgaaagaagggacaggtggcagagacaacgaaag
accaagaagcagagtaggaaagagaactgggctaggacacagcctttaaa
gatttgtctgcagtgccttgcatccatcagatagatagtctgctccacag
acttctgaaatagaataacttcctaaagagaaaataaaagccattggctg
gattgaaacagtggagggtacacaatgatgtattggttatatggggatga
tgggtgtac

gaattcaggggacctagcagaagaggaagcaggaacagtgtaaggatcag
aggggaattgaggacaccaagaaaataaggttctctaaatcaaaatgagc
aaaggtcatctgaactcactgaggcagcatgtatagggcctgtacaagtt
tgcaccaggtcttctgtgtatatattgtggcttccagtgtaatgtttcta
tggggccctttactatgtgaatgagtgggtcttggattcttgtgctggtt
ctggggttctttttttgtttgcttgtattgtctaccattgatatgttggt
tttattttattttattttatcattttatattaagggataacaatccctta
gaagtctgttatttatttttgtttgttcatatgctaatgagagacagaaa
gggaatgtctgtgaacaggagaagaggagagaaaaacatgggagagtaga
gggaggcaaaactataatcaggatgtgaggaaaaaatccattttcaataa
aaggaaaaatatctaaaaaatagggtttttttcatgcaatatagagtgaa
aatgggtttcctttccccgacttctatgaaatcccacccaccttctcaca
catcagaatccacaccctttcttgttctctctcattagaaaacagacatc
tggaaaaagacaaaaaaagaaaaaagaaaagaaaagaaaagataaataaa
ataaataaataataaataaaagataaaaaaaccacatatacctaagtaga
aaaaaaaacaaacaaatgaacagagaaaaatcagagacacatagaagtcc
cataaagacacagaattggaaatcattatatatatgagcaaaagatctgt
agaaaatacacaaactaaacccagaaacccagcacagaccaagcattatg
agacaaaaggtaaaacaacaacaccaccccaacaataaaataaaacaata
agcaaaacagaacaaaccctccaaaaaaacctttcaatgttactatggag
tttgttttgtgttgacagctctgctgtcacttgtggggtctgccctaaag
tgccatttgtatatccaataatatattgtccatgatgtacatccattgct
cattccatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7094631_7095439
seq2: B6Ng01-268L06.b_46_854 (reverse)

seq1  GTACACCCATCATCCCCATATAACCAATACATCATTGTGTACCCTCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACCCATCATCCCCATATAACCAATACATCATTGTGTACCCTCCACT  50

seq1  GTTTCAATCCAGCCAATGGCTTTTATTTTCTCTTTAGGAAGTTATTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAATCCAGCCAATGGCTTTTATTTTCTCTTTAGGAAGTTATTCTAT  100

seq1  TTCAGAAGTCTGTGGAGCAGACTATCTATCTGATGGATGCAAGGCACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGTCTGTGGAGCAGACTATCTATCTGATGGATGCAAGGCACTGC  150

seq1  AGACAAATCTTTAAAGGCTGTGTCCTAGCCCAGTTCTCTTTCCTACTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATCTTTAAAGGCTGTGTCCTAGCCCAGTTCTCTTTCCTACTCTG  200

seq1  CTTCTTGGTCTTTCGTTGTCTCTGCCACCTGTCCCTTCTTTCAGGGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGTCTTTCGTTGTCTCTGCCACCTGTCCCTTCTTTCAGGGTCAT  250

seq1  AGTGAGCTGAACCCTCCTAAACCATGAGACCAAGCAAGTCCTCCCTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTGAACCCTCCTAAACCATGAGACCAAGCAAGTCCTCCCTCCTG  300

seq1  AGCTGTTTCTGCAAGACAGTTTTTTTTTCCACAGCTTTTATCACATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTCTGCAAGACAGTTTTTTTTTCCACAGCTTTTATCACATTCTC  350

seq1  CAGGTGGATCTGTTAGGCTTCCTTGGATTTTGCGGTAGAGCAGGAAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATCTGTTAGGCTTCCTTGGATTTTGCGGTAGAGCAGGAAGAGG  400

seq1  CTGCGCAGCTGGAGATTCCTGGAAGCAAGGAAGAACAATGGGATAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCAGCTGGAGATTCCTGGAAGCAAGGAAGAACAATGGGATAAAGAG  450

seq1  GCAGGAAGGCGAGCAGAAGGTTTGAAAAGGAAAGTGAGAGGGATTATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGCGAGCAGAAGGTTTGAAAAGGAAAGTGAGAGGGATTATGGG  500

seq1  AGAAGATGGAGTGTGGACAGGGAAGATGGAGATTATGGGATTATATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGGAGTGTGGACAGGGAAGATGGAGATTATGGGATTATATTTGA  550

seq1  ATTTCAAAAAAGAAAAAAAGAAAGAAAAAAAAAAGGAAAGCATTAGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAAAGAAAAAAAGAAAGAAAAAAAAAAGGAAAGCATTAGGCAA  600

seq1  AAGGTTAGACAACGGTAAGATCCAGCCAGGAAGCAGTGTGACACTGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGACAACGGTAAGATCCAGCCAGGAAGCAGTGTGACACTGAGTG  650

seq1  GCCTGTCGAGACAGCTCTCATTCTGAAGACTCCTGATATAAGGATGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCGAGACAGCTCTCATTCTGAAGACTCCTGATATAAGGATGAGAA  700

seq1  GCATGAAGGACTAGGTTAGGATCCCTAGCACTCACGGAGAAAAAGTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGGACTAGGTTAGGATCCCTAGCACTCACGGAGAAAAAGTTAAC  750

seq1  CTATACGTTGTATCTGTATCTTCAGTGCTGGGGCTGCAGGGCCAGAGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACGTTGTATCTGTATCTTCAGTGCTGGGGCTGCAGGGCCAGAGTCA  800

seq1  AGGGAATTC  809
      |||||||||
seq2  AGGGAATTC  809


seq1: chr13_6958946_6959651
seq2: B6Ng01-268L06.g_478_1176

seq1  TGAACAGGAGAAGAGGAGAGAAAAACATGGGAGAGTAGAGGGAGGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGGAGAAGAGGAGAGAAAAACATGGGAGAGTAGAGGGAGGCAAAA  50

seq1  CTATAATCAGGATGTGAGGAAAAAATCCATTTTCAATAAAAGGAAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCAGGATGTGAGGAAAAAATCCATTTTCAATAAAAGGAAAAATA  100

seq1  TCTAAAAAATAGGGTTTTTTTCATGCAATATAGAGTGAAAATGGGTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAAATAGGGTTTTTTTCATGCAATATAGAGTGAAAATGGGTTTCC  150

seq1  TTTCCCCGACTTCTATGAAATCCCACCCACCTTCTCACACATCAGAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCGACTTCTATGAAATCCCACCCACCTTCTCACACATCAGAATCC  200

seq1  ACACCCTTTCTTGTTCTCTCTCATTAGAAAACAGACATCTGGAAAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTTTCTTGTTCTCTCTCATTAGAAAACAGACATCTGGAAAAAGAC  250

seq1  AAAAAAAGAAAAAAGAAAAGAAAAGAAAAGATAAATAAAATAAATAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAAAAGAAAAGAAAAGAAAAGATAAATAAAATAAATAAATA  300

seq1  ATAAATAAAAGATAAAAAAACCACATATACCTAAGTAGAAAAAAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAGATAAAAAAACCACATATACCTAAGTAGAAAAAAAAACAA  350

seq1  ACAAATGAACAGAGAAAAATCAGAGACACATAGAAGTCCCATAAAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAACAGAGAAAAATCAGAGACACATAGAAGTCCCATAAAGACAC  400

seq1  AGAATTGGAAATCATTATATATATGAGCAAAAGATCTGTAGAAAATACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGAAATCATTATATATATGAGCAAAAGATCTGTAGAAAATACAC  450

seq1  AAACTAAACCCAGAAACCCAGCACAGACCAAGCATTATGAGACAAAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAACCCAGAAACCCAGCACAGACCAAGCATTATGAGACAAAAGGT  500

seq1  AAAACAACAACACCACCCCAACAATAAAATAAAACAATAAAGCAAAACAG  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAACAACAACACCACCCCAACAATAAAATAAAACAAT-AAGCAAAACAG  549

seq1  AACAAAACCCTCCAAAAAAACCTTTCCAATGTTACTATGGAGTTTGTTTT  600
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAC-AAACCCTCCAAAAAAACCTTT-CAATGTTACTATGGAGTTTGTTTT  597

seq1  GTGTTGACAGCCTCCTGCTGTCAACTTGTGGGGTCTGCCCTAAAGTGGCA  650
      |||||||||||   |||||||| |||||||||||||||||||||||| ||
seq2  GTGTTGACAGC--TCTGCTGTC-ACTTGTGGGGTCTGCCCTAAAGTGCCA  644

seq1  TTTGTATATCCAAT-ATATATTGTCCAATGATGTACCATCAATGGCTCAT  699
      |||||||||||||| ||||||||||| |||||||| |||| || ||||||
seq2  TTTGTATATCCAATAATATATTGTCC-ATGATGTA-CATCCATTGCTCAT  692

seq1  TCAATGC  706
      || ||||
seq2  TCCATGC  699


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