MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-270K05
Chromosome	13 (Build37)
Map Location	72,037,956 - 72,039,047
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC627230, LOC100042360
Downstream gene	Irx1, LOC100042828, LOC100042832, LOC100042836, Irx2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC627230 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042360 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Irx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16371 MGI:1197515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1540 ESTs, 10 Proteins

name	LOC100042836 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Irx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16372 MGI:1197526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627230 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264323 GeneID:627230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001478019.1

name	LOC100042360 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264325 GeneID:100042360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042360 transcript_id : XM_001478038.1

name	Irx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288844 GeneID:16371 MGI:1197515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 1 (Drosophila) transcript_id : NM_010573.2

name	LOC100042832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264374 GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1538 ESTs, 10 Proteins product : similar to 60S ribosomal protein L9, transcript variant 2 transcript_id : XM_001478982.1

name	LOC100042832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264372 GeneID:100042832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1539 ESTs, 10 Proteins product : similar to 60S ribosomal protein L9, transcript variant 1 transcript_id : XM_001478975.1

name	Irx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059033 GeneID:16372 MGI:1197526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 2 (Drosophila) transcript_id : NM_010574.2

name	LOC627230 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264324 GeneID:627230
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478069.1

name	LOC100042360 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264326 GeneID:100042360
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478088.1

name	Irx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288845 CCDS:CCDS26627.1 GeneID:16371 MGI:1197515
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 1 protein_id : NP_034703.2

name	LOC100042832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264373 GeneID:100042832
definition	codon_start : 1 product : similar to 60S ribosomal protein L9 isoform 1 protein_id : XP_001479025.1

name	LOC100042832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264375 GeneID:100042832
definition	codon_start : 1 product : similar to 60S ribosomal protein L9 isoform 2 protein_id : XP_001479032.1

name	Irx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559370 CCDS:CCDS26628.1 GeneID:16372 MGI:1197526
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 2 protein_id : NP_034704.1

name	LOC100042828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042828
definition	number : 1 pseudo : _no_value

name	LOC100042836 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042836
definition	number : 1 pseudo : _no_value

clone name	MSMg01-102E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-270K05.b	B6Ng01-270K05.g
ACC	GA072927	GA072928
length	1,177	1,088
definition	B6Ng01-270K05.b	B6Ng01-270K05.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg ggcgttctgggttctgatgatggtgagtggtcctgccttctgttagtagg attcttacgtttacctttcgccatctggcaatctctggagttagttgtta tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc cggccgtctggagctgaggatggtgctgcctcagaagctctgtggctctt gccgggaaggtggctggttgtctggagctgaagatggcgccacccagaag ctctgcgactctcgcccgtcccagaaaaggctggcactctgtattccaca cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct cccgccggcgcctgtgccacaagcctctcaggccgggcagacccccgtgc tctcaccaggaaagtggccggctatctggagctgaagatggcaccgccca gaagctctgcgactctcgcccgtcccagaaacggctggcactctgtattc cacacggtcacccgtgcagcctgccctccgcggagtcccggagccaagaa gctcccgccggcgcctgtgccacaaacctctcagccgggcagacccccgt gctctcacaggagtggccggctgtctcttgttcccaattctaagagggca cagtgtccacacttggtcttcattcttcctgagttcatgcgtttagcaaa ttgtatcttaatcttggtatcctagttggcttaattccacttatcaggag tacgattccgtggattctttggaatggttacctcatcgaattgctcagcc atcattggcctgatctaaataggccgt	gaattcttagttggatttgatgtgtcagctctgctggagctgcacacata tcctgcggcctttgtgcacatccaaagttaaaagccaagaaggagaagta gatgaaggttttagacaccctggactgctgggaagggatcttagatggat ttccctggaagctgtgtgtctacttccagtccccaagcctccagctcaaa tatacacccagacttgtgtttcttctggaacatacagcttctgactcccc ggcaaggcaaaccatgagcataattgtccaaacttgagttcactgaacca ctttttcccaggaaggggcattttcctttggtggattaaatctagtcacc attaagcttaaggagtttgagttgtgatccagaaagggcatctgtaaccc ctacatcaaaaaggcagtggaaggtcatttcccatttgcttgccttgcat agtgaaaggcagattgaaaatcacaaggtgcgggttcatagaagagccct ggtgaatacttcccagaaggccttgtgactgagttgtaagagaatgatag gagtcagagttctacgaagtcaaaggattactgcccttggtgaatagagg gctttgaaatcatcttcattccaagaagtaaaagagtggggtttctatgt agctttgggaaagtcgggtaagcaagtacccactctctgtgtaaggttca gctaacccaggcagcggtggcacacactccgtgggtttaaagagctttct acaaagtgcagtttatattgaatttctttgtttctggtatctgtggtccc tgaagacatggcaactacaaagcagcccctgatacagggatattgggaca gacgttacgaaaggcatttccacataataaagacttctaagaatccccga tgcccaattagcctagcagttacgccaaagttttccacttggtgcatggt aagtgcagcagtattgacttgataaaaccacaattatttagaacacagtg atgccatcaaaggagacatctaagcgactgagttgctcatttgaggatcc acataagcccaataacccacctgtactaccatagaacc
quality values	Open. Hide. 62 47 20 26 62 62 62 62 62 62 62 62 54 38 41 47 49 62 62 62 62 62 62 62 59 39 62 59 62 62 59 51 59 62 54 48 28 46 59 54 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 49 43 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 56 54 47 62 62 62 62 62 62 62 62 62 62 62 49 33 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 62 62 62 62 38 62 54 42 54 54 62 62 62 62 62 62 62 62 62 62 62 62 46 58 58 58 54 26 58 42 41 58 58 54 58 58 58 58 58 58 58 58 54 42 58 58 52 58 58 58 58 58 58 58 58 49 58 54 58 58 58 54 58 54 58 58 58 52 33 58 52 58 58 48 58 58 58 38 58 58 54 58 58 58 58 58 42 58 58 51 58 58 34 54 39 58 58 46 53 54 58 39 51 58 46 47 30 58 49 27 54 54 51 54 58 54 51 46 34 58 53 58 50 51 47 58 58 51 58 50 58 50 46 34 58 43 35 54 23 39 23 51 58 58 46 50 40 58 58 52 58 39 50 41 54 58 37 35 50 51 52 50 58 51 51 37 42 22 43 51 40 54 51 52 37 44 50 50 58 40 58 58 53 50 51 43 53 51 58 44 21 53 41 44 44 50 54 54 21 54 40 27 51 29 48 45 24 39 24 38 30 54 51 35 50 50 38 51 52 42 50 54 44 54 38 52 32 36 30 38 19 44 31 44 54 46 54 37 47 28 10 46 20 47 37 54 54 32 40 21 14 9 44 35 42 47 32 27 41 42 53 32 53 31 31 27 41 40 34 32 27 47 9 14 19 40 47 26 53 34 53 29 52 35 37 45 45 37 46 37 26 43 45 29 32 33 21 26 22 31 41 26 39 31 46 30 45 51 31 35 18 36 42 33 31 42 39 31 31 42 22 31 21 31 31 42 31 31 32 46 30 32 31 26 42 40 27 25 46 46 32 31 26 41 23 31 21 23 23 24 33 37 31 31 39 30 31 31 37 25 32 30 29 28 24 22 30 14 30 32 27 31 28 29 24 30 32 31 25 29 33 31 37 23 44 25 24 32 30 33 31 23 22 33 18 27 31 41 23 10 17 24 8 30 22 16 29 22 33 10 4 5 33 17 34 24 13 18 27 17 26 31 17 17 21 32 32 23 31 25 13 17 32 26 27 22 20 21 26 15 15 18 7 15 4 10 25 39 25 12 13 11 28 20 33 30 28 24 17 14 29 20 17 11 10 16 7 14 6 8 6 3 3 5 7 20 8 12 9 21 19 26 10 5 7 9 19 10 18 9 7 25 13 29 14 8 9 27 24 16 27 20 24 7 8 3 13 17 5 5 9 6 7 4 9 12 20 13 5 6 9 5 3 3 2 10 12 17 8 19 15 10 22 9 13 16 18 9 4 16 6 15 5 13 17 10 12 20 19 16 5 11 27 18 15 6 18 13 28 8 16 6 11 4 4 14 7 5 10 4 3 8 10 10 11 17 17 4 6 6 11 21 4 11 4 3 3 3 7 6 8 5 21 4 3 5 5 6 6 3 2 4 5 11 6 6 11 6 6 4 5 4 3 2 2 4 8 5 6 5 4 6 6 6 11 8 4 2 15 5 8 11 6 4 6 6 4 5 21 8 18 8 10 19 6 5 3 2 1 2 3 8 2 3 1 3 3 2 1 7 5 5 25 4 5 7 5 8 4 6 7 11 3 3 2 4 6 12 6 5 1 1 3 6 13 5 14	Open. Hide. 62 47 51 47 62 62 62 59 59 62 62 62 62 43 35 59 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 59 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 52 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 52 54 58 58 58 58 58 54 54 54 58 54 39 54 49 58 58 47 58 58 58 45 41 58 58 58 42 58 58 58 52 58 58 52 58 52 58 51 42 58 54 52 58 50 58 58 53 58 58 53 53 58 46 58 51 54 54 53 51 50 58 58 48 58 54 46 58 49 51 58 41 26 58 50 58 58 58 49 58 58 54 48 49 58 50 58 58 44 41 54 52 58 53 58 58 37 58 58 51 58 49 58 42 51 53 46 51 58 54 58 50 50 58 50 52 47 34 52 53 58 53 39 52 52 58 58 54 50 54 43 52 58 49 58 51 37 58 53 53 53 53 47 58 53 53 42 54 58 58 50 49 58 50 53 54 53 37 45 52 53 54 54 40 39 44 37 52 35 51 49 52 32 47 54 54 41 51 53 52 51 54 52 54 45 54 39 31 45 26 54 32 40 44 39 37 51 53 38 51 42 54 47 37 39 54 41 40 40 52 41 54 17 51 53 33 37 45 52 44 47 51 54 52 54 53 52 46 54 54 42 54 46 32 53 53 40 53 31 41 36 36 52 53 40 31 32 31 53 53 32 53 53 40 53 31 35 53 42 45 36 41 38 33 41 32 52 33 53 45 53 45 53 31 45 31 51 31 33 31 46 46 23 33 31 42 31 51 30 43 51 25 43 51 51 30 51 32 32 31 31 31 32 31 30 46 30 30 17 27 31 35 43 24 46 36 31 31 31 30 42 46 37 40 31 31 37 35 32 32 30 25 46 10 6 9 30 31 31 40 41 41 31 22 31 26 37 24 28 31 30 23 37 30 31 46 9 27 29 21 24 35 46 39 31 41 19 19 19 32 26 31 36 38 48 38 25 31 25 31 36 34 34 28 31 28 46 29 32 31 44 44 31 16 38 19 29 17 41 28 19 30 25 21 22 19 38 37 31 32 21 32 31 25 30 21 12 10 7 11 38 22 41 38 23 30 48 41 38 14 6 7 14 26 15 32 29 12 29 31 32 28 28 28 15 24 17 23 26 32 12 18 10 29 21 19 28 19 20 22 21 22 32 11 25 9 9 8 12 34 39 29 14 22 25 28 14 14 30 33 23 37 48 24 22 12 20 13 5 3 5 8 16 6 14 22 16 15 7 10 3 5 9 15 28 8 15 7 16 9 16 14 20 28 22 28 10 18 16 28 20 26 24 23 16 11 5 19 7 28 24 24 28 13 19 34 20 8 6 5 25 8 9 24 5 3 3 8 15 7 22 13 19 25 10 23 7 16 16 25 18 29 15 9 3 6 4 5 6 14 18 12 21 4 12 4 5 3 5 15 15 9 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_72037956_72039047
seq2: B6Ng01-270K05.g_62_1149

seq1  GAATTCTTAGTTGGATTTGATGTGTCAGCTCTGCTGGAGCTGCACACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTTGGATTTGATGTGTCAGCTCTGCTGGAGCTGCACACATA  50

seq1  TCCTGCGGCCTTTGTGCACATCCAAAGTTAAAAGCCAAGAAGGAGAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCGGCCTTTGTGCACATCCAAAGTTAAAAGCCAAGAAGGAGAAGTA  100

seq1  GATGAAGGTTTTAGACACCCTGGACTGCTGGGAAGGGATCTTAGATGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGTTTTAGACACCCTGGACTGCTGGGAAGGGATCTTAGATGGAT  150

seq1  TTCCCTGGAAGCTGTGTGTCTACTTCCAGTCCCCAAGCCTCCAGCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGAAGCTGTGTGTCTACTTCCAGTCCCCAAGCCTCCAGCTCAAA  200

seq1  TATACACCCAGACTTGTGTTTCTTCTGGAACATACAGCTTCTGACTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACCCAGACTTGTGTTTCTTCTGGAACATACAGCTTCTGACTCCCC  250

seq1  GGCAAGGCAAACCATGAGCATAATTGTCCAAACTTGAGTTCACTGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGCAAACCATGAGCATAATTGTCCAAACTTGAGTTCACTGAACCA  300

seq1  CTTTTTCCCAGGAAGGGGCATTTTCCTTTGGTGGATTAAATCTAGTCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCCAGGAAGGGGCATTTTCCTTTGGTGGATTAAATCTAGTCACC  350

seq1  ATTAAGCTTAAGGAGTTTGAGTTGTGATCCAGAAAGGGCATCTGTAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTTAAGGAGTTTGAGTTGTGATCCAGAAAGGGCATCTGTAACCC  400

seq1  CTACATCAAAAAGGCAGTGGAAGGTCATTTCCCATTTGCTTGCCTTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCAAAAAGGCAGTGGAAGGTCATTTCCCATTTGCTTGCCTTGCAT  450

seq1  AGTGAAAGGCAGATTGAAAATCACAAGGTGCGGGTTCATAGAAGAGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGGCAGATTGAAAATCACAAGGTGCGGGTTCATAGAAGAGCCCT  500

seq1  GGTGAATACTTCCCAGAAGGCCTTGTGACTGAGTTGTAAGAGAATGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATACTTCCCAGAAGGCCTTGTGACTGAGTTGTAAGAGAATGATAG  550

seq1  GAGTCAGAGTTCTACGAAGTCAAAGGATTACTGCCCTTGGTGAATAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGTTCTACGAAGTCAAAGGATTACTGCCCTTGGTGAATAGAGG  600

seq1  GCTTTGAAATCATCTTCATTCCAAGAAGTAAAAGAGTGGGGTTTCTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAATCATCTTCATTCCAAGAAGTAAAAGAGTGGGGTTTCTATGT  650

seq1  AGCTTTGGGAAAGTCGGGTAAGCAAGTACCCACTCTCTGTGTAAGGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGGAAAGTCGGGTAAGCAAGTACCCACTCTCTGTGTAAGGTTCA  700

seq1  GCTAACCCAGGCAGCGGTGGCACACACTCCGTGGGTTTAAAGAGCTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCCAGGCAGCGGTGGCACACACTCCGTGGGTTTAAAGAGCTTTCT  750

seq1  ACAAAGTGCAGTTTATATTGAATTTCTTTGTTTCTGGTATCTGTGGTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGCAGTTTATATTGAATTTCTTTGTTTCTGGTATCTGTGGTCCC  800

seq1  TGAAGACATGGCAACTACAAAGCAGCCCCTGATACAGGGATATTGGGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATGGCAACTACAAAGCAGCCCCTGATACAGGGATATTGGGACA  850

seq1  GACGTTACG-AAGGCATTTCCACATAATAAAGACTTCTAAGAATCCCCGA  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTACGAAAGGCATTTCCACATAATAAAGACTTCTAAGAATCCCCGA  900

seq1  TGCCCAATTAGCCTAGCAGTTACGCCAAAGTTTT-CACTTGGTGCATGGT  948
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGCCCAATTAGCCTAGCAGTTACGCCAAAGTTTTCCACTTGGTGCATGGT  950

seq1  AAGTGCAAGCAGTATTGACTTGAATAAAACCACAATTATTTAGAACACAG  998
      |||||| ||||||||||||||| |||||||||||||||||||||||||| 
seq2  AAGTGC-AGCAGTATTGACTTG-ATAAAACCACAATTATTTAGAACACA-  997

seq1  GTGATGCCAATCAAAGGAGACATCTAAGCGACTGAGTTGCTCATTTTGAG  1048
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  GTGATGCC-ATCAAAGGAGACATCTAAGCGACTGAGTTGCTCA-TTTGAG  1045

seq1  GATCCACATAAG-CCAATAACCCAACCTTGTACTAACATAGAACC  1092
      |||||||||||| |||||||||||  | ||||||| |||||||||
seq2  GATCCACATAAGCCCAATAACCCA--CCTGTACTACCATAGAACC  1088

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information