BAC Information

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BAC

Clone NameB6Ng01-271K17
Chromosome13 (Build37)
Map Location 103,232,620 - 103,233,079
singlet/doubletsinglet
Overlap genenone
Upstream genePik3r1
Downstream geneCd180, Mast4, EG621312, EG432800, LOC432801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271K17.bB6Ng01-271K17.g
ACCGA073690GA073691
length1,227454
definitionB6Ng01-271K17.b B6Ng01-271K17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatatacagcaaccag
tagccaacattaaactaaatggagagaaacttgaagcaatcccactaaaa
tcagggactagacaaggctgcccactttctccttacctattaaatatagt
acttgaagtcctagccagagcaattaggcaacaaaaggagatcaagggga
tacaaattgggaaggaagatgtcgaaatatcactatttgcagatgatatg
atagtatatataagtgactgtaaaaattccaccagagtactcctaaactt
gataaataacttcagtgcagtagctggatatgaaattaactcaaacaaat
tagtggccttcctctacacaaaggataaacaggatgagaaagaaattagg
gaaacaacacccttcacaatagtcacaaatgatataaaataccttcatgt
gactctaaggaactgaaagatctgtatgataagaacttcaagtcttgaag
aaagaaattaaagaaaatctcagaagatggaaagatctcccatgctcatg
gattggcaggattaatatagtaaaaatggctatcttgccgaaagtaatct
acagagtcaatgcaatccccatcaaaattccaactcaattcttcacatag
ttagaaagggcaatttgaaaattcatttgaaataacaaaaaacctaggat
agcaaaaaccattctcaacaataaaatatcctctggttgaatccctgact
caagctgtgctacagagcaattgtgataaaaactgcatggtattggtaca
gtgacagagaggtagatcaaatggaatagaactgaagacccagaaatgaa
cacacatacatatggtcacttgatctttgacaaagggactaaaaccatcc
agtgagaaaaagacagcactttcaacaagtggtgctggctcaactgggtg
gttagcatgtagaagaatgcaaattgatccatttttatccccttgtacaa
agctcaagtctaagtggatcaaggaattccacataaaaaaagagaagact
gaaacttacagaagggagaaagtgggaagagtctcaaagattatggcaca
ggaggaaaattcctgaacgaaacggcaattgcttgtgctgtagatcagaa
ttggacaaattgacctcataaattgcaagcttctataaggccaaaggaac
ctggttccatatagaaccatagatgtc
tccgtgcatagaaagtgtgaatctgtataacttcatgacatctgaagcta
acttctctcttccacatactgcttattcccaacgttgttaccgggaagtt
ttaggctctgttccctttgtgtgactatattccactatatgaccaaccac
catgctttgtacatccctctgggttgcttcgagctctaccctggtaagaa
taaagctgctataaattcacctaactcattttctatggaggacaattacg
ttaatttattttgggtcaggattggaaaggatcgagaaaaggagcaggat
tatgtgaacttaacaaaaccatttaaaatggccatcattgggaagagagg
ccccttggtcttgcaaactttatatgccccagtacaggggaatgccaggg
ccaagaagtgggagtaggtaggaaggggagcagggcgagggggagggtat
aggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103232620_103233079
seq2: B6Ng01-271K17.g_64_523

seq1  GAATTCTCCGTGCATAGAAAGTGTGAATCTGTATAACTTCATGACATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTGCATAGAAAGTGTGAATCTGTATAACTTCATGACATCTG  50

seq1  AAGCTAACTTCTCTCTTCCACATACTGCTTATTCCCAACGTTGTTACCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAACTTCTCTCTTCCACATACTGCTTATTCCCAACGTTGTTACCGG  100

seq1  GAAGTTTTAGGCTCTGTTCCCTTTGTGTGACTATATTCCACTATATGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTTAGGCTCTGTTCCCTTTGTGTGACTATATTCCACTATATGACC  150

seq1  AACCACCATGCTTTGTACATCCCTCTGGGTTGCTTCGAGCTCTACCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCATGCTTTGTACATCCCTCTGGGTTGCTTCGAGCTCTACCCTGG  200

seq1  TAAGAATAAAGCTGCTATAAATTCACCTAACTCATTTTCTATGGAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATAAAGCTGCTATAAATTCACCTAACTCATTTTCTATGGAGGACA  250

seq1  ATTACGTTAATTTATTTTGGGTCAGGATTGGAAAGGATCGAGAAAAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGTTAATTTATTTTGGGTCAGGATTGGAAAGGATCGAGAAAAGGAG  300

seq1  CAGGATTATGTGAACTTAACAAAACCATTTAAAATGGCCATCATTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTATGTGAACTTAACAAAACCATTTAAAATGGCCATCATTGGGAA  350

seq1  GAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAATG  400

seq1  CCAGGGCCAAGAAGTGGGAGTAGGTAGGAAGGGGAGCAGGGCGAGGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCAAGAAGTGGGAGTAGGTAGGAAGGGGAGCAGGGCGAGGGGGA  450

seq1  GGGTATAGGG  460
      ||||||||||
seq2  GGGTATAGGG  460