BAC Information

Click to search

BAC

Clone NameB6Ng01-272D06
Chromosome13 (Build37)
Map Location 4,991,523 - 4,992,712
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272D06.bB6Ng01-272D06.g
ACCGA074089GA074090
length1,1761,171
definitionB6Ng01-272D06.b B6Ng01-272D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaaggggaaaaaaacaaaattaatattctaagtatattgaa
ccattagacatttatattttatatagtttactattaattgtagtagataa
aacaaacacactatttttcctcttttatctaacttgaagagggaataaat
taaataacttgactttacactgagctaagttacttaaaggaatagtctga
tttttgtgtaacattcagggaacttttaactgtctatgaaatgttattaa
gagagcaggggaagtttttatactaaacagaaaactttaaaataaagata
gttctttgtacttttcaatttgtcttcctgccaagaagttcctacacagt
acacattcagaaaagcattctatttatctctgtttactcattcttaaacc
tggcaggtattaaaaaggccatgttcaaacaaaatgacacagtgccagtg
aacactgtctcattcattcacaggagcttatctaaaaaaaaaaaaatgga
tagcacataatttgaatcaagatgctcttaggatttgtgaactggctcct
ctctgccctgtcagtgctacctgaaatcactgtgtacctactatagtata
agaaaccttagaaagagaaatctatgaataattgtaaacaaaatagactt
agggtttagaaaattgaatgtgttctattcctctctaccaagctctcagt
tccaaagtagaaaaatagaattcttcatcatagttttcttcctaataggg
actttgtcagatgtattagtcaaacttggattccctccagcaaaaaagct
tgcaagcttgcatccaaatttaaaactaatgaattctgtgcataccaaac
tggaaagcatacaatctttgttatcacggatgggtactcaacagaactcc
atagccaatgagtcaataaatattcttatttactgggcccagctcaaaca
ctctctgtttttaaagtgcttgctaagaaaaaagataaacatattcatta
ggaaatcatagcactttctaagggaaatgatttctggagatcatagactc
tcaatttcatgggtttaaagatctcagggatagctttctttcactgtagg
atctttccaaataccttggcttgggtgaccacaacctctatactgcagtt
caagctggagatccagttggagaagc
gaattctctgttcatctctgtactccatttttaaattgggttatttggtt
tgctgatgtctaacttcttgagttctttatatattttgggtattagcctt
ctgtcacatatagggttgatgaagctcttttcctaatctttagtctgcta
ttttttcccctattgacagtgttctttgacttacagtagcttttcagttt
catgaggttctatttatcagttttttatcttagagcctgagccaatagtg
ttctgttctggaagttttctcctataccattgcattcaatgctgattgaa
gtggaagtttctggtcatgtcatgtgactcatatgatgttttgctaaggc
agactcatgtgatgttttactgaggcaagacccatgggaggacacataat
gtttgaaaagagtaagtgggtctccaaggacaaggacagcacagttgcat
agcttcctgtgcaatgcttctttggtcttgcatcttaggtgatctttact
tcattgagaggcacagcagagaactcttggcattctgacttgtcctggtc
tctcctgctgactcttgctgattcaacagaggcctcaactgttgttgact
tatatctagtgacactatgtaacttcactgttggtatcttgacactactg
aactggactgctggtttcctgacatacagagattggactcacccaaagaa
ctaattctaaacaggtctacatccccttgtcctattttccacccctctct
tctacctttggacagtgagctagaactcaggtcacaatgtttgagaatcc
ttatttaaaaacctaggcctacagctatttcccacatttagtgcatacag
ttttgtaacatttgaccttgaattttgtgcagggtgataaaaatggacct
atttgtagcacagcttgggatcaggattgtgatacttcaagccttctttt
attgttcagattattttagctatcctgtattttttatttttttccagatg
agttgagagttctctctcatgtcttgtagattttgtgtgagtggattgca
ttgatttgtagatgctctgttagatgatgttttcacttatgtttatctac
tgattcatgagcatgagaaacctttctgttcttaagattcgcttctcttc
aatgagagagtgtagagtccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4991523_4992712
seq2: B6Ng01-272D06.b_45_1220

seq1  GAATTCTTTCAAGGGGAAAAAAACAAAATTAATATTCTAAGTATATTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAGGGGAAAAAAACAAAATTAATATTCTAAGTATATTGAA  50

seq1  CCATTAGACATTTATATTTTATATAGTTTACTATTAATTGTAGTAGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGACATTTATATTTTATATAGTTTACTATTAATTGTAGTAGATAA  100

seq1  AACAAACACACTATTTTTCCTCTTTTATCTAACTTGAAGAGGGAATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACACACTATTTTTCCTCTTTTATCTAACTTGAAGAGGGAATAAAT  150

seq1  TAAATAACTTGACTTTACACTGAGCTAAGTTACTTAAAGGAATAGTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTTGACTTTACACTGAGCTAAGTTACTTAAAGGAATAGTCTGA  200

seq1  TTTTTGTGTAACATTCAGGGAACTTTTAACTGTCTATGAAATGTTATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTAACATTCAGGGAACTTTTAACTGTCTATGAAATGTTATTAA  250

seq1  GAGAGCAGGGGAAGTTTTTATACTAAACAGAAAACTTTAAAATAAAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGGGGAAGTTTTTATACTAAACAGAAAACTTTAAAATAAAGATA  300

seq1  GTTCTTTGTACTTTTCAATTTGTCTTCCTGCCAAGAAGTTCCTACACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGTACTTTTCAATTTGTCTTCCTGCCAAGAAGTTCCTACACAGT  350

seq1  ACACATTCAGAAAAGCATTCTATTTATCTCTGTTTACTCATTCTTAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCAGAAAAGCATTCTATTTATCTCTGTTTACTCATTCTTAAACC  400

seq1  TGGCAGGTATTAAAAAGGCCATGTTCAAACAAAATGACACAGTGCCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGTATTAAAAAGGCCATGTTCAAACAAAATGACACAGTGCCAGTG  450

seq1  AACACTGTCTCATTCATTCACAGGAGCTTATCTAAAAAAAAAAAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTCTCATTCATTCACAGGAGCTTATCTAAAAAAAAAAAAATGGA  500

seq1  TAGCACATAATTTGAATCAAGATGCTCTTAGGATTTGTGAACTGGCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATAATTTGAATCAAGATGCTCTTAGGATTTGTGAACTGGCTCCT  550

seq1  CTCTGCCCTGTCAGTGCTACCTGAAATCACTGTGTACCTACTATAGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCTGTCAGTGCTACCTGAAATCACTGTGTACCTACTATAGTATA  600

seq1  AGAAACCTTAGAAAGAGAAATCTATGAATAATTGTAAACAAAATAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTTAGAAAGAGAAATCTATGAATAATTGTAAACAAAATAGACTT  650

seq1  AGGGTTTAGAAAATTGAATGTGTTCTATTCCTCTCTACCAAGCTCTCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTAGAAAATTGAATGTGTTCTATTCCTCTCTACCAAGCTCTCAGT  700

seq1  TCCAAAGTAGAAAAATAGAATTCTTCATCATAGTTTTCTTCCTAATAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTAGAAAAATAGAATTCTTCATCATAGTTTTCTTCCTAATAGGG  750

seq1  ACTTTGTCAGATGTATTAGTCAAACTTGGATTCCCTCCAGCAAAAAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCAGATGTATTAGTCAAACTTGGATTCCCTCCAGCAAAAAAGCT  800

seq1  TGCAAGCTTGCATCCAAATTTAAAACTAATGAATTCTGTGCATACCAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCTTGCATCCAAATTTAAAACTAATGAATTCTGTGCATACCAAAC  850

seq1  TGGAAAGCATACAATCTTTGTTATCACGGATGGGTACTCAACAGAACTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCATACAATCTTTGTTATCACGGATGGGTACTCAACAGAACTCC  900

seq1  ATAGCCAATGAGTCAATAAATATTTCTTATTTACTGGGCCCAGCTCAAAC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATAGCCAATGAGTCAATAAATA-TTCTTATTTACTGGGCCCAGCTCAAAC  949

seq1  ACTCTCTGTTTTTAAAGTGCTTGCTAAAGAAAAAGATAAACATATTCATT  1000
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  ACTCTCTGTTTTTAAAGTGCTTGCTAAGAAAAAAGATAAACATATTCATT  999

seq1  AGGAAATCATAGCAACTTTCTAAAGGAAATTGATTTCTGAGAATCATAAG  1050
      ||||||||||||| ||||||||| ||||| |||||||||   ||||| ||
seq2  AGGAAATCATAGC-ACTTTCTAAGGGAAA-TGATTTCTGGAGATCAT-AG  1046

seq1  ACTCTCAATTTCATGGGTTTTAAAGATCTTCCAGGATAGCTTTCTTTCAC  1100
      ||||||||||||||||| |||||||||| ||  |||||||||||||||||
seq2  ACTCTCAATTTCATGGG-TTTAAAGATC-TCAGGGATAGCTTTCTTTCAC  1094

seq1  TGTAGAATTCCTTTCAAAATACCTT-GCCTGGGTGAACACACAACCTCTA  1149
      ||||| ||  ||||| ||||||||| || |||||||   |||||||||| 
seq2  TGTAGGAT--CTTTCCAAATACCTTGGCTTGGGTGA--CCACAACCTCT-  1139

seq1  AATACTTGCAGTTTCACAGTTGAGATCCACAGTT-GAGAAGC  1190
       |||| ||||| ||||   | ||||||  ||||| |||||||
seq2  -ATAC-TGCAG-TTCAAGCTGGAGATC--CAGTTGGAGAAGC  1176