BAC Information

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BAC

Clone NameB6Ng01-273L16
Chromosome13 (Build37)
Map Location 119,462,074 - 119,463,254
singlet/doubletsinglet
Overlap genenone
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309
Downstream geneLOC100041278, Fgf10, LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273L16.bB6Ng01-273L16.g
ACCGA075225GA075226
length1,1761,172
definitionB6Ng01-273L16.b B6Ng01-273L16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaaactaactggtcttgggcttttatttttggattttc
caatttagttgagtataagcttttgtagtaggatctaatgactttttgaa
tttcctcaatttcagttgctatgtctcccttttaccagagacactgaaac
ttatagaggagaaagtagggaaaagcctcgaagatatgggtacaggggaa
aaattcctgaatagaacagcagtggcttgtgctgtaagatcaagaatcga
taaatgggacctcataaaattgcaaagcttctgcaaagcaaaagacaccg
tcaataagacaaaaaggccaccaacagattgggaaaggatctttacctat
cccaaattggataggggactaatatccaatatatataaagaactcaagaa
ggtggactccagaaaatcaaataaccccattaaaaaatggggctcagagc
tgaacaaagaattctcacctgaggaataccgaatggcagagaagcacctg
aaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaac
actgagattccacttcactccagtcagaatggctaagatcaaaaactcag
gtgacaggatgtggagaaaggggaacactcctccattgttggtgggattg
caagcttgtacaaccactctggaaatcagtctggtggttcctcagaaaat
tggacatagtactacgggaggatcccgcaatacctctcctgggcatatat
ccagaagatgtcccaactggttagaagtacacatactccactatgttcat
agcagccttgtttataatagccagaagctggaaagaacccagatgtccct
tttaatttctgatttgcttaattttgatacttttctgtgctcgttggtta
gtttggctaagggtttatctatcttgttgattttctcaagaaccagctct
tagttttgttgattctctgtatagtctctttgtctaattgggttaatttc
agctctgagtttatttctgcatatactctctgaatgtgtttgcttcttat
gttctagagttttcagattgtgctggtactgctaggagtaagatgttctc
gatttctttattagtactctttgcaagattcctcctagacctgcctttat
aaggtcccataaaattgggggctagc
gaattccaaagaaattgggtttccccaggaatctcatgctgggagaaggg
aaaagcgccagctagaagagggacttgtctcctggagagatttcacagag
ttctaacaacttgtcagaccactttagaggttgaggctgtagctgacaat
gatgggtcagtcagtggtaggtgggactgaggctgtttagatgtgtatcc
ttagacctttacttaaactttaatctttcttaagagtcaggaagaggaat
gcaagggattcagtggttctctgtcctttttcccaatgccaccatattga
agaaatctcctttccacttcccactattattatgccttttaataccaact
aaattgaggactgatgggtgaacctggctgggggcacatgctatgccacc
caattttgataactattgatgtttgccttgaagcataaatacttgctgac
cagatgttcaactaaacaaaaaactagagaaaaaaaagaaacaaaacctc
tctcttagcattaattagtaagtaaatggggtggctttatggaaacacag
cagagaagccttcaatgagggtttgcatcaagatttataagaaattctct
tctccgagtgtcttaaatttgtatgttaacttgaaaacttaattcctgca
tgtaaacataacccatttaatttacaaatggtgcttagcaggtctttact
ggtatcagagtaacatcaccaaacaactttggacacagaaaacacacaca
cacacaaatggaagtcaagctgggggtcggggtaagtgccacaaaacaag
agaagcaaatggtgttgatctcagagctcacttcctttacttctgattgt
attgcttctgggggaaatggagttgtcactaccagtattcacctatggga
catccagagatgtctctcaagttaccagtgcatttccaccagcacaccca
gagctgtagaacaacaaagcacatagtactcttcactaccacaccctttc
ccagagcttggaactagaaaaccaaatagaactcaaatggattgcttgct
ttgttacagataaaagcataccgggagtatcacctcaggaatagcttaat
tcctgagcaagaaacacgacagcatgaatctcaaggatctctgcatcatg
attctggaacggtggattctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119462074_119463254
seq2: B6Ng01-273L16.g_62_1233 (reverse)

seq1  GGAGAATCCACCGTCTCAGGATCATGATGGCAAAGAGGACTCCTCTGAGA  50
      ||||||||||||||  ||| |||||||| ||| |||    |||| |||||
seq2  GGAGAATCCACCGTTCCAGAATCATGAT-GCAGAGA----TCCT-TGAGA  44

seq1  -TCATGCTGTCCGTG-TTCTTGCCTCTGGGATTAAGCTATCCCTGA-GTG  97
       ||||||||| |||| |||||| ||| || |||||||||| ||||| |||
seq2  TTCATGCTGT-CGTGTTTCTTG-CTCAGGAATTAAGCTATTCCTGAGGTG  92

seq1  ATTAACTCCC-GTATGCTTTTAATCTGTAACAAAGCAAGCAATCCATTTT  146
      ||  |||||| |||||||||| |||||||||||||||||||||||| |||
seq2  AT--ACTCCCGGTATGCTTTT-ATCTGTAACAAAGCAAGCAATCCA-TTT  138

seq1  GAGTTCCTATTTGGTTTTCTAGTTCCAAGGCTCTGGG-AAGGGTGTGGTA  195
      ||||| |||||||||||||||||||||| |||||||| ||||||||||||
seq2  GAGTT-CTATTTGGTTTTCTAGTTCCAA-GCTCTGGGAAAGGGTGTGGTA  186

seq1  GTGAAGAGTACTATGTGCTTTGTTGTTCTACAGCTCTGGGTGTGCTGGTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGTACTATGTGCTTTGTTGTTCTACAGCTCTGGGTGTGCTGGTG  236

seq1  GAAATGCACTGGTAACTTGAGAGACATCTCTGGATGTCCCATAGGTGAAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCACTGGTAACTTGAGAGACATCTCTGGATGTCCCATAGGTGAAT  286

seq1  ACTGGTAGTGACAACTCCATTTCCCCCAGAAGCAATACAATCAGAAGTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAGTGACAACTCCATTTCCCCCAGAAGCAATACAATCAGAAGTAA  336

seq1  AGGAAGTGAGCTCTGAGATCAACACCATTTGCTTCTCTTGTTTTGTGGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGAGCTCTGAGATCAACACCATTTGCTTCTCTTGTTTTGTGGCA  386

seq1  CTTACCCCGACCCCCAGCTTGACTTCCATTTGTGTGTGTGTGTGTTTTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCCGACCCCCAGCTTGACTTCCATTTGTGTGTGTGTGTGTTTTCT  436

seq1  GTGTCCAAAGTTGTTTGGTGATGTTACTCTGATACCAGTAAAGACCTGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAAAGTTGTTTGGTGATGTTACTCTGATACCAGTAAAGACCTGCT  486

seq1  AAGCACCATTTGTAAATTAAATGGGTTATGTTTACATGCAGGAATTAAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCATTTGTAAATTAAATGGGTTATGTTTACATGCAGGAATTAAGT  536

seq1  TTTCAAGTTAACATACAAATTTAAGACACTCGGAGAAGAGAATTTCTTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTTAACATACAAATTTAAGACACTCGGAGAAGAGAATTTCTTAT  586

seq1  AAATCTTGATGCAAACCCTCATTGAAGGCTTCTCTGCTGTGTTTCCATAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGATGCAAACCCTCATTGAAGGCTTCTCTGCTGTGTTTCCATAA  636

seq1  AGCCACCCCATTTACTTACTAATTAATGCTAAGAGAGAGGTTTTGTTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCCCATTTACTTACTAATTAATGCTAAGAGAGAGGTTTTGTTTCT  686

seq1  TTTTTTTCTCTAGTTTTTTGTTTAGTTGAACATCTGGTCAGCAAGTATTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTCTAGTTTTTTGTTTAGTTGAACATCTGGTCAGCAAGTATTT  736

seq1  ATGCTTCAAGGCAAACATCAATAGTTATCAAAATTGGGTGGCATAGCATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCAAGGCAAACATCAATAGTTATCAAAATTGGGTGGCATAGCATG  786

seq1  TGCCCCCAGCCAGGTTCACCCATCAGTCCTCAATTTAGTTGGTATTAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAGCCAGGTTCACCCATCAGTCCTCAATTTAGTTGGTATTAAAA  836

seq1  GGCATAATAATAGTGGGAAGTGGAAAGGAGATTTCTTCAATATGGTGGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAATAATAGTGGGAAGTGGAAAGGAGATTTCTTCAATATGGTGGCA  886

seq1  TTGGGAAAAAGGACAGAGAACCACTGAATCCCTTGCATTCCTCTTCCTGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAAAGGACAGAGAACCACTGAATCCCTTGCATTCCTCTTCCTGA  936

seq1  CTCTTAAGAAAGATTAAAGTTTAAGTAAAGGTCTAAGGATACACATCTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGAAAGATTAAAGTTTAAGTAAAGGTCTAAGGATACACATCTAA  986

seq1  ACAGCCTCAGTCCCACCTACCACTGACTGACCCATCATTGTCAGCTACAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCAGTCCCACCTACCACTGACTGACCCATCATTGTCAGCTACAG  1036

seq1  CCTCAACCTCTAAAGTGGTCTGACAAGTTGTTAGAACTCTGTGAAATCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCTCTAAAGTGGTCTGACAAGTTGTTAGAACTCTGTGAAATCTC  1086

seq1  TCCAGGAGACAAGTCCCTCTTCTAGCTGGCGCTTTTCCCTTCTCCCAGCA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGACAAGTCCCTCTTCTAGCTGGCGCTTTTCCCTTCTCCCAGCA  1136

seq1  TGAGATTCCTGGGGAAACCCAATTTCTTTGGAATTC  1181
      ||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCCTGGGGAAACCCAATTTCTTTGGAATTC  1172