BAC Information

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BAC

Clone NameB6Ng01-274H14
Chromosome13 (Build37)
Map Location 87,125,196 - 87,126,246
singlet/doubletsinglet
Overlap genenone
Upstream geneCox7c, LOC100042887, LOC100042893
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274H14.b
ACCGA075767
length1,043
definitionB6Ng01-274H14.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagttactttatatccctttttgattgcgtatttggttttttg
atgacaaaaaacaaaacttggttgacctcctgtacatgtgtttcttttgc
agggttgctttacagtctacatgataaatggtgccatcacttgagctttg
tttgagaatcaacacacaaatttttctcctgctgatgaaccaatctacat
gccaccaattatacctcattttatctaaggtaccaatcataatccatgca
ttccattaatgtacatatactgctatgcaaatcttctctttccacataaa
cttaaagtcattaataattctaaggctgcatacactggtacgaatttatt
agtcacattcattttaagaatattctttttttgtacctgccataaaaata
ctggcttgattcatacataaagatggtcctgacatagttttcttctatca
gttgatcaagtctatggcaacaaatctgaagatttgaggttagcaaatta
actaattgcaagtaaataaatgacaaacccgtttaaactacatcctaaat
tgttactggacgcatatttgcgacctcttactaagaacctgacacttctt
aaccttctgactggcgggaagaatttatcatatatgtatatatatgtata
taacttataatgatataatatataatttatcatatatatggtttattttc
tacttattgtctcgaggtcaatatcttgattcatttttaatcaatgtttt
taattcattagtgcattctttagtaattattaggtatgtattatgtatga
cagtggaatatatactactttatcagtgacacagacagaaaattataatg
aaagcttttcatgttgctttcatccaccaatattataccatcttgaaact
agggatgtaacatatgagtctgagtagtatctatgatgcaagtcatttct
ttgttggcgtgtttgagtatgtgccctaaatctgctgatcttatgctctt
tgaggtatttcttctgtttagatctgttaatactctattacat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87125196_87126246
seq2: B6Ng01-274H14.b_41_1083

seq1  GAATTCTCAGTTACTTTATATCCCTTTTTGATTGGGTATTTGGTTTTTTG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATTCTCAGTTACTTTATATCCCTTTTTGATTGCGTATTTGGTTTTTTG  50

seq1  ATGACAGAAAACAAAGCTTGGTTGACCTCCTGTACATGTGTTTCTTTTGC  100
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGACAAAAAACAAAACTTGGTTGACCTCCTGTACATGTGTTTCTTTTGC  100

seq1  AGGGTTGCTTTACAGTCTACAGGATAAATGGTGCCATCACTTGAGCTTTG  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGGTTGCTTTACAGTCTACATGATAAATGGTGCCATCACTTGAGCTTTG  150

seq1  TTTGAGAATCAAGACACAAATTTTTCTCCTGCTGATGAACCAATCTACAT  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAATCAACACACAAATTTTTCTCCTGCTGATGAACCAATCTACAT  200

seq1  GCCACCAATTAGACCTCATTTTATCTAAGGTACCAATCATAATCCATGCA  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAATTATACCTCATTTTATCTAAGGTACCAATCATAATCCATGCA  250

seq1  TTCCATTAATGTACATATACTGCTATGCAAATCTTCTCTTTCCACATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTAATGTACATATACTGCTATGCAAATCTTCTCTTTCCACATAAA  300

seq1  CTTAAAGTCATTAATAATTTTAAGGTTGCATACACTGGTAGGAATTTATT  350
      ||||||||||||||||||| ||||| |||||||||||||| |||||||||
seq2  CTTAAAGTCATTAATAATTCTAAGGCTGCATACACTGGTACGAATTTATT  350

seq1  AGTCACATTCATTTTAAGAATATTCTTTTTTTGTAGTTGCCATAAAAATA  400
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  AGTCACATTCATTTTAAGAATATTCTTTTTTTGTACCTGCCATAAAAATA  400

seq1  CTGGTTTGATTCATACATAAAGATGGTCCTGACATAGTTTTCTTCTATCA  450
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGATTCATACATAAAGATGGTCCTGACATAGTTTTCTTCTATCA  450

seq1  GTTGATCAAGTCTATGGCAGCAAATCTGAAGATTTGAGGTTAGCAAATTA  500
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTTGATCAAGTCTATGGCAACAAATCTGAAGATTTGAGGTTAGCAAATTA  500

seq1  GCTAAGTGCAAGTAAATAAATGACAAACCCGTTTAAATTAGATCCTAAAT  550
       |||| ||||||||||||||||||||||||||||||| || |||||||||
seq2  ACTAATTGCAAGTAAATAAATGACAAACCCGTTTAAACTACATCCTAAAT  550

seq1  TGTTACTGGACGCATATTTGCAGCAGTTTACTAAGAACCTGACACTTCTT  600
      |||||||||||||||||||||  |   |||||||||||||||||||||||
seq2  TGTTACTGGACGCATATTTGCGACCTCTTACTAAGAACCTGACACTTCTT  600

seq1  AACCTTCTGACTGGCGGGAAGAATTTATCATATATGTATATATATGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCTGACTGGCGGGAAGAATTTATCATATATGTATATATATGTATA  650

seq1  TAATTTATAATGATATAATATATAATTTATCATATATATGGTTTATTTTC  700
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATAATGATATAATATATAATTTATCATATATATGGTTTATTTTC  700

seq1  TACTTATTTTCTCGAGGTCAATATCTTGATTCATTTTTAATCAATGTTTT  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTGTCTCGAGGTCAATATCTTGATTCATTTTTAATCAATGTTTT  750

seq1  TAATTCATTAAGGCATTCTTTAGTAATTATTAGGTATGTATTAGGTATGA  800
      ||||||||||  ||||||||||||||||||||||||||||||| ||||||
seq2  TAATTCATTAGTGCATTCTTTAGTAATTATTAGGTATGTATTATGTATGA  800

seq1  CAGTGGAATATATACTACTTTAACAGTGTCAGAGACAGTTAAATTATAAT  850
      |||||||||||||||||||||| ||||| || ||||||  ||||||||||
seq2  CAGTGGAATATATACTACTTTATCAGTGACACAGACAG-AAAATTATAAT  849

seq1  GAAAAGCTTTTTATTTTGTTTTAAATCCACCAATATTATACCATCTTGAA  900
      | ||||||||| || ||| |||  |||||||||||||||||||||||| |
seq2  G-AAAGCTTTTCATGTTGCTTT-CATCCACCAATATTATACCATCTTG-A  896

seq1  AACTAGGTATGTAACATATGAGTCTGAATAGTATCTATGATGCAAATCAT  950
      ||||||| ||||||||||||||||||| ||||||||||||||||| ||||
seq2  AACTAGGGATGTAACATATGAGTCTGAGTAGTATCTATGATGCAAGTCAT  946

seq1  TTATTTATTTAGTGTGTTTGAGTAATGTGCCCTAAAATCTGCTGAATCTT  1000
      || |||  || | |||||||||| ||||||||| |||||||||| |||||
seq2  TTCTTT-GTTGGCGTGTTTGAGT-ATGTGCCCT-AAATCTGCTG-ATCTT  992

seq1  ATGCCCCTTTAAGGTA-TTCTTCTGTTTTGGTCTGTTTAAAACTCTA-TA  1048
      ||| | |||| ||||| ||||||||||| | |||| |||| |||||| ||
seq2  ATG-CTCTTTGAGGTATTTCTTCTGTTTAGATCTG-TTAATACTCTATTA  1040

seq1  CAT  1051
      |||
seq2  CAT  1043