BAC Information

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BAC

Clone NameB6Ng01-275H05
Chromosome13 (Build37)
Map Location 80,471,435 - 80,472,536
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275H05.bB6Ng01-275H05.g
ACCGA076485GA076486
length1,0941,094
definitionB6Ng01-275H05.b B6Ng01-275H05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatattttgtgtatcagtcttctattgggcatgtagttgg
tgaaggttttgtttgtttgtttcattttgtcagcctaatgacagaggcct
tggcaatgcagaaacttctcagtttcattaggtcctatttattacttgtt
gatcttagagcctatagggatggcattcagggtatattgttttatgttga
ggtcttttttttcttatttcatgttgagttttgtgtagggtgatatatat
ggattcatttggatttttctacttaaaactatccagcgctatttgtaatt
gtattttttttctgtgtgtacttctagtctttttatttaaaaaaaataag
ctgttgatagtatatgtatatatatatctgggttttcaccttgatttcat
taatcaacttgattgattttctgccaatagcatgttgttcttattacaat
agctctgtagtacaacttgttattggggatggtgatacctcacagaagtt
cttttattgtttaggattgtttttagctatcctgtttgtatttgtttcca
catgaagttgaaaattgctgcttcaagatctgtgaagaaatgttggaatt
ttgttgaggaggttaggcattttttactatgttaatcccatgaccatggg
gaatcttttcatcctttgatttcttttatttctttcttcaattatttgga
tttttaccatacaaacatcccacttccttggttagagacacctgtataag
atattttatattatttcagaaaattgtgaaatattttgtgtggtgttttg
aaaagatatgaccacaaagactcatgtgtttgaatgtttgggccatagga
agtggcactattaggagttatggtattgttggaggaaatgtgtcactgtg
tggtaactgagtttttctattctctagctgcattcaaatgtataagacag
tctcctttttcttgtctctgataagatgtagaaactctaagcactatgtc
tgccatgaacacgctatgacataatggaactaaccttctgaaactgaagt
cagcctcaaaaaagtctttatttttgactgtgtgttgctttcag

gaattcaccacaaaacagaagagctaatgcagtgggtctatttgtttgaa
tttataaataattaaaaaacccataaacctgtttaaaaacctatcaagcc
tggcattggtggcgcacacctttaattccagcactcgggagtcagaggca
agcagatttctgagtcgaggccagcctgaactacagagtgcgttccagga
tagatagggctacaaagagaaactctgtctcaaaaaacaaacaaacaaaa
aaagaaaacaaaaaaaaatcaaactttttttaaacaattactttaggagc
aattttatttgtttattatttattattgttattgttgttgttattattta
gtgtgtgtcacacatgcctctatgtttgcatgtgtgatatgtatgtgagt
gtacaaaggctgccatgtatgtagtggtcattggacttcactgagtcagt
tatctccttcagtctctacatgtgctcaaaccaagatccatcatcagatg
acaagtgctttcatttcactcatctctaaagaactacactatgttctact
aattattaaacttcattaaatatgtatataaaataattgacactcaaatg
actaaaataatatattaaccatattaaaagtatgcaaaaacattcatcca
ttttcatgataaatgcatgtgtgtacagggacatatatttgcagatatac
atgctttgtgttaggctccatcactcacatataacccagtattcaggtca
agttaattatattctttagacaatataacatatttaacacctatatttaa
aattattatgactataacttctgttattttccataacctggaaatatgta
gaaattcttgaaatatatgttttaattgcattacttttgtaagaacacca
taacaggtaacatgtgtggttcaatttctttgtgtgtggtttccaacact
gtttttgtttacttttgtttatcatgaaaatttgacatctgatgaagtaa
attaggattctagaattaatgtgggccgtgtgagaatgtttaacaaggag
ttctatggactgagaacattctgccaccatatatcaaatgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80471435_80472536
seq2: B6Ng01-275H05.g_64_1157

seq1  GAATTCACCACAAAACAGAAGAGCTAATGCAGTGGGTCTATTTGTTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACAAAACAGAAGAGCTAATGCAGTGGGTCTATTTGTTTGAA  50

seq1  TTTATAAATAATTAAAAAACCCATAAACCTGTTTAAAAACCTATCAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATAATTAAAAAACCCATAAACCTGTTTAAAAACCTATCAAGCC  100

seq1  TGGCATTGGTGGCGCACACCTTTAATTCCAGCACTCGGGAGTCAGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGGTGGCGCACACCTTTAATTCCAGCACTCGGGAGTCAGAGGCA  150

seq1  AGCAGATTTCTGAGTCGAGGCCAGCCTGAACTACAGAGTGCGTTCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATTTCTGAGTCGAGGCCAGCCTGAACTACAGAGTGCGTTCCAGGA  200

seq1  TAGATAGGGCTACAAAGAGAAACTCTGTCTCAAAAAACAAACAAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGGCTACAAAGAGAAACTCTGTCTCAAAAAACAAACAAACAAAA  250

seq1  AAAGAAAACAAAAAAAAATCAAACTTTTTTTAAACAATTACTTTAGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACAAAAAAAAATCAAACTTTTTTTAAACAATTACTTTAGGAGC  300

seq1  AATTTTATTTGTTTATTATTTATTATTGTTATTGTTGTTGTTATTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTGTTTATTATTTATTATTGTTATTGTTGTTGTTATTATTTA  350

seq1  GTGTGTGTCACACATGCCTCTATGTTTGCATGTGTGATATGTATGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTCACACATGCCTCTATGTTTGCATGTGTGATATGTATGTGAGT  400

seq1  GTACAAAGGCTGCCATGTATGTAGTGGTCATTGGACTTCACTGAGTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGGCTGCCATGTATGTAGTGGTCATTGGACTTCACTGAGTCAGT  450

seq1  TATCTCCTTCAGTCTCTACATGTGCTCAAACCAAGATCCATCATCAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTTCAGTCTCTACATGTGCTCAAACCAAGATCCATCATCAGATG  500

seq1  ACAAGTGCTTTCATTTCACTCATCTCTAAAGAACTACACTATGTTCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGCTTTCATTTCACTCATCTCTAAAGAACTACACTATGTTCTACT  550

seq1  AATTATTAAACTTCATTAAATATGTATATAAAATAATTGACACTCAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAAACTTCATTAAATATGTATATAAAATAATTGACACTCAAATG  600

seq1  ACTAAAATAATATATTAACCATATTAAAAGTATGCAAAAACATTCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATAATATATTAACCATATTAAAAGTATGCAAAAACATTCATCCA  650

seq1  TTTTCATGATAAATGCATGTGTGTACAGGGACATATATTTGCAGATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGATAAATGCATGTGTGTACAGGGACATATATTTGCAGATATAC  700

seq1  ATGCTTTGTGTTAGGCTCCATCACTCACATATAACCCAGTATTCAGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGTGTTAGGCTCCATCACTCACATATAACCCAGTATTCAGGTCA  750

seq1  AGTTAATTATATTCTTTAGACAATATAACATATTTAACACCTATATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTATATTCTTTAGACAATATAACATATTTAACACCTATATTTAA  800

seq1  AATTATTATGACTATAACTTCTGTTATTTTCCATAACCTGGAAATATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTATGACTATAACTTCTGTTATTTTCCATAACCTGGAAATATGTA  850

seq1  GAAATTCTTGAAATATATGTTTTAATTGCATTACTTTTGTAAGAACACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTTGAAATATATGTTTTAATTGCATTACTTTTGTAAGAACACCA  900

seq1  TAACAGGTAACATGTGTGGTTCAAATTCTTTGTGTGTGGTTTCCAACACT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAACAGGTAACATGTGTGGTTCAATTTCTTTGTGTGTGGTTTCCAACACT  950

seq1  GTTTTTGTTTACTTTTGTTTATCATGAAAATTTGACAATCTGATGAAAGT  1000
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  GTTTTTGTTTACTTTTGTTTATCATGAAAATTTGAC-ATCTGATG-AAGT  998

seq1  AAAATTAGAATTCTAGAAATTAATGGTGGGCGGTGTGAGAAATTGTTAAC  1050
       ||||||| ||||||| ||||||| |||||| ||||||| |||  |||||
seq2  -AAATTAGGATTCTAG-AATTAAT-GTGGGCCGTGTGAG-AATGTTTAAC  1044

seq1  AAAGAAGGTTCTATGGACTGAAGAACA-TCTGCAAACATATATCAAATGT  1099
      || ||  ||||||||||||| |||||| ||||| | ||||||||||||||
seq2  AAGGA--GTTCTATGGACTG-AGAACATTCTGCCACCATATATCAAATGT  1091

seq1  GTT  1102
      |||
seq2  GTT  1094


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