MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-276F10
Chromosome	13 (Build37)
Map Location	52,117,735 - 52,266,526
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
Downstream gene	LOC100040321, Diras2, LOC100040572, Syk, Auh, Nfil3, Ror2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Spin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20729 MGI:109242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930519N16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75124 MGI:1922374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667728 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667728 MGI:3646032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 20 Proteins

name	LOC667733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins pseudo : _no_value

name	Ppia-ps13_636.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606521
definition	note : peptidylprolyl isomerase A pseudogene 13_636.1 pseudo : _no_value

name	LOC625524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 Proteins pseudo : _no_value

name	Edg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13610 MGI:1339365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20418 MGI:106179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cks2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66197 MGI:1913447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Secisbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75420 MGI:1922670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sema4d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20354 MGI:109244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gadd45g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23882 MGI:1346325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040321 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040321
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Diras2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68203 MGI:1915453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040572 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Syk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20963 MGI:99515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Auh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11992 MGI:1338011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nfil3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18030 MGI:109495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ror2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26564 MGI:1347521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802917 GeneID:20729 MGI:109242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spindlin 1 transcript_id : NM_146043.2

name	Spin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709810 GeneID:20729 MGI:109242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spindlin 1 transcript_id : NM_011462.2

name	4930519N16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803151 GeneID:75124 MGI:1922374
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930519N16 gene transcript_id : NM_029173.2

name	Edg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802975 GeneID:13610 MGI:1339365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelial differentiation, sphingolipid G-protein-coupled receptor, 3 transcript_id : NM_010101.3

name	Shc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384043 GeneID:20418 MGI:106179
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : src homology 2 domain-containing transforming protein C3 transcript_id : NM_009167.2

name	Cks2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375774 GeneID:66197 MGI:1913447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC28 protein kinase regulatory subunit 2 transcript_id : NM_025415.2

name	Secisbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812874 GeneID:75420 MGI:1922670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SECIS binding protein 2 transcript_id : NM_029279.1

name	Sema4d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130841 GeneID:20354 MGI:109244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D transcript_id : NM_013660.3

name	Gadd45g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753937 GeneID:23882 MGI:1346325
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest and DNA-damage-inducible 45 gamma transcript_id : NM_011817.1

name	Diras2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326529 GeneID:68203 MGI:1915453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIRAS family, GTP-binding RAS-like 2 transcript_id : NM_001024474.2

name	LOC100040572 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264239 GeneID:100040572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100040572 transcript_id : XM_001474907.1

name	Syk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56550044 GeneID:20963 MGI:99515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spleen tyrosine kinase transcript_id : NM_011518.2

name	Auh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116268114 GeneID:11992 MGI:1338011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AU RNA binding protein/enoyl-coenzyme A hydratase transcript_id : NM_016709.2

name	Nfil3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58331157 GeneID:18030 MGI:109495
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, interleukin 3, regulated transcript_id : NM_017373.3

name	Ror2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271532 GeneID:26564 MGI:1347521
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor tyrosine kinase-like orphan receptor 2 transcript_id : NM_013846.3

name	Spin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165378 CCDS:CCDS26510.1 GeneID:20729 MGI:109242
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007143 - female meiosis [Evidence IC]; GO:0007276 - gametogenesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; spindlin product : spindlin isoform 2 protein_id : NP_666155.1

name	Spin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755620 GeneID:20729 MGI:109242
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007143 - female meiosis [Evidence IC]; GO:0007276 - gametogenesis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; spindlin product : spindlin isoform 1 protein_id : NP_035592.1

name	4930519N16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165362 CCDS:CCDS26511.1 GeneID:75124 MGI:1922374
definition	codon_start : 1 product : nucleoredoxin protein_id : NP_083449.1

name	Edg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753716 CCDS:CCDS26512.1 GeneID:13610 MGI:1339365
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : endothelial differentiation, sphingolipid G-protein-coupled receptor, 3 protein_id : NP_034231.1

name	Shc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677937 GeneID:20418 MGI:106179
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 exception : mismatches in translation product : src homology 2 domain-containing transforming protein C3 protein_id : NP_033193.1

name	Cks2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384804 GeneID:66197 MGI:1913447
definition	GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0007127 - meiosis I [Evidence IMP] codon_start : 1 product : CDC28 protein kinase regulatory subunit 2 protein_id : NP_079691.1

name	Secisbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812875 GeneID:75420 MGI:1922670
definition	codon_start : 1 product : SECIS binding protein 2 protein_id : NP_083555.1

name	Sema4d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49274623 CCDS:CCDS26514.1 GeneID:20354 MGI:109244
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0050772 - positive regulation of axonogenesis [Evidence IGI] [Evidence IDA] codon_start : 1 note : M-sema G; semaphorin H product : semaphorin 4D protein_id : NP_038688.2

name	Gadd45g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753938 CCDS:CCDS26515.1 GeneID:23882 MGI:1346325
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000186 - activation of MAPKK activity [Evidence IDA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0042095 - interferon-gamma biosynthesis [Evidence TAS]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0045063 - T-helper 1 cell differentiation [Evidence TAS] codon_start : 1 exception : mismatches in translation note : growth arrest and DNA-damage-inducible, gamma product : growth arrest and DNA-damage-inducible 45 gamma protein_id : NP_035947.1

name	Diras2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71725385 CCDS:CCDS26516.1 GeneID:68203 MGI:1915453
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : DIRAS family, GTP-binding RAS-like 2 protein_id : NP_001019645.1

name	LOC100040572 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264240 GeneID:100040572
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474957.1

name	Syk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56550045 CCDS:CCDS26517.1 GeneID:20963 MGI:99515
definition	GO_component : GO:0019815 - B cell receptor complex [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0042101 - T cell receptor complex [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0004716 - receptor signaling protein tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007257 - activation of JNK activity [Evidence IMP]; GO:0000187 - activation of MAPK activity [Evidence IDA] [Evidence IMP]; GO:0050853 - B cell receptor signaling pathway [Evidence IDA]; GO:0007166 - cell surface receptor linked signal transduction [Evidence IMP] [Evidence IDA]; GO:0007167 - enzyme linked receptor protein signaling pathway [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IDA] [Evidence IMP]; GO:0019370 - leukotriene biosynthesis [Evidence IMP]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0046638 - positive regulation of alpha-beta T cell differentiation [Evidence IGI]; GO:0046641 - positive regulation of alpha-beta T cell proliferation [Evidence IGI]; GO:0045579 - positive regulation of B cell differentiation [Evidence IMP]; GO:0050850 - positive regulation of calcium-mediated signaling [Evidence IMP]; GO:0045588 - positive regulation of gamma-delta T cell differentiation [Evidence IMP]; GO:0045425 - positive regulation of granulocyte macrophage colony-stimulating factor biosynthesis [Evidence IMP]; GO:0045401 - positive regulation of interleukin-3 biosynthesis [Evidence IMP]; GO:0043306 - positive regulation of mast cell degranulation [Evidence IMP]; GO:0050731 - positive regulation of peptidyl-tyrosine phosphorylation [Evidence IMP]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0001820 - serotonin secretion [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : spleen tyrosine kinase protein_id : NP_035648.2

name	Auh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116268115 CCDS:CCDS26518.1 GeneID:11992 MGI:1338011
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004300 - enoyl-CoA hydratase activity [Evidence IDA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004490 - methylglutaconyl-CoA hydratase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IDA] GO_process : GO:0009083 - branched chain family amino acid catabolism [Evidence IEA]; GO:0000288 - mRNA catabolism, deadenylation-dependent decay [Evidence TAS] codon_start : 1 product : AU RNA-binding enoyl-coenzyme A hydratase protein_id : NP_057918.2

name	Nfil3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393832 CCDS:CCDS26519.1 GeneID:18030 MGI:109495
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] codon_start : 1 product : nuclear factor, interleukin 3, regulated protein_id : NP_059069.1

name	Ror2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271533 CCDS:CCDS26520.1 GeneID:26564 MGI:1347521
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0001502 - cartilage condensation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030538 - embryonic genitalia morphogenesis [Evidence IMP]; GO:0007223 - frizzled-2 signaling pathway [Evidence IPI]; GO:0007254 - JNK cascade [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : neurotrophic tyrosine kinase, receptor related 2 product : receptor tyrosine kinase-like orphan receptor 2 protein_id : NP_038874.3

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 1 pseudo : _no_value

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 2 pseudo : _no_value

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 3 pseudo : _no_value

name	LOC100040321 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040321
definition	number : 1 pseudo : _no_value

name	LOC100040321 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040321
definition	number : 2 pseudo : _no_value

name	EG667728 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264231 GeneID:667728 MGI:3646032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 20 Proteins product : predicted gene, EG667728 transcript_id : XR_035232.1

name	LOC667733 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264232 GeneID:667733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins product : similar to cortactin pseudo : _no_value transcript_id : XR_031720.1

clone name	MSMg01-175P19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-209K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-351I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-276F10.b	B6Ng01-276F10.g
ACC	GA077146	GA077147
length	1,099	354
definition	B6Ng01-276F10.b	B6Ng01-276F10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(52,265,437 - 52,266,526)	(52,117,735 - 52,118,088)
sequence	gaattcatcagtatggaggctgagttctgtgattttctatgcttggtgct gcttcatctgcttagagattgacacgtctattctagcagcttccgttagg gtattctttgatggaatgtgaactgtccctccatcatctatgaggaactc tccagtgcgttaaaggctcccatgagagtgcgcccttcagatctctgagt gtgacactaagctgtcattctccctatatttctgatgaactcttcaaatt agaggtaaatcatcacggaagcacttgcttggcctttacatctcaaactg tcttagttagggtttctgtcactgtgagaaaacaccaagaccgaaagtaa ctttgggaggaaaggatttattccattatatggacttatagtccatcatc cagagaggtcaaggcactcactcgaggcaggcacagcaccagaggccatg gaggaacgctgattactggcttgtttgccatggcttgctcagccttattt cttatagcacctaggaccaccagcccaggggtatcaccacccacattgag ctgagtccattccacatcaatcaccaatcaagaaaatgaacctcagactt gccctcagggccattgggtagggtcattgttcctcagttgaggttccctc tcccaaatgactctagcttgtgtcaagttggcctaaaactaagcaacata ctggccaatgatctagtgaggattctttccaccatctatctcacataacc atcagggaaggaactacgtaatgcttgcagatggagctacagcagcgatg ggtgggacccacctggaggttaaccctggctaggattgcatattctgacc ccaggtgctcagcacttatatgagaagcataaagatgcctctgacttggg ctgttggcatcaaagcaggcctagcaccagaagaaccaatgaccactgga caaacccaagccaagagtcttttgtgttaaaggttttagtagagtcttgt tgggctcttgcaggatggccaatcttctgctgtaacttctcagctccaat aatgagctcaagcagtccctggaaaataataagattcctgtctggcctg	tcatctagcacaaagctacaccttcagctcagttcccattaggtctctat gaatgtgtgtgtgtgtgtgtgtgtgatcagaactgaacaactgtagattc cctattcgtcacttagtgttccggtgctgtaaaacaatgctccaggttgg gtaatttgtaagtgaaaaggctgatattggctcgtggttctggaggctcg caaacacggtggcagggtcagcttctgatgagaagaaaaggaacagacat gccagaatgttttcaacatggtggttgaaagttagaacattgaggttctc agtctgcccttggggattatgcaagaggatagaagggggtggggtgggta gaga
quality values	Open. Hide. 49 22 20 28 54 22 15 45 42 47 62 62 43 47 62 62 62 54 49 56 62 62 54 47 62 62 62 54 54 20 22 20 14 21 22 24 25 19 25 22 28 25 18 18 43 50 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 59 62 59 59 62 59 59 62 62 59 51 49 43 27 35 38 28 48 46 32 32 28 40 34 40 35 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 59 54 54 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 59 62 59 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 49 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 37 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 56 56 56 30 38 44 38 49 62 62 62 62 62 62 62 62 49 62 62 62 62 54 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 54 62 62 62 54 46 62 62 62 49 62 62 62 62 62 62 62 62 62 62 58 43 48 58 58 58 58 58 58 58 58 58 54 54 52 43 54 58 54 54 58 54 54 58 58 54 54 52 52 54 58 58 54 58 58 58 54 58 45 58 58 58 58 52 58 54 58 58 58 45 42 54 58 48 39 52 54 54 52 33 58 52 48 45 54 52 52 54 54 53 51 41 58 54 47 45 41 54 49 58 58 58 58 54 54 49 58 43 51 53 51 58 58 49 43 38 49 51 51 58 37 48 54 44 45 25 39 40 46 37 46 46 41 53 53 52 51 51 46 32 35 31 58 54 34 49 49 51 51 49 51 58 38 58 54 50 49 50 51 49 50 47 51 51 44 27 44 51 50 58 58 58 50 40 53 58 37 43 41 47 44 50 58 50 49 50 58 44 43 29 42 51 51 51 42 52 50 50 53 32 49 51 38 27 54 33 37 50 53 53 54 39 35 39 36 38 44 25 49 53 42 40 53 54 53 40 38 50 39 53 41 41 27 35 29 53 52 29 9 49 49 26 37 26 53 40 33 35 53 36 35 28 44 32 53 42 51 33 33 33 42 33 29 40 42 31 44 46 42 26 52 40 32 52 25 29 45 40 34 52 32 39 34 33 49 49 25 47 46 46 21 16 51 40 16 17 33 24 32 40 18 17 47 33 31 25 32 22 36 40 31 32 29 40 45 33 25 46 28 31 24 31 31 30 41 31 51 37 37 26 42 32 13 33 36 33 30 30 46 24 42 32 42 33 23 16 31 30 31 31 42 38 34 30 31 32 42 16 36 13 13 31 31 36 38 47 46 31 32 16 19 21 33 25 31 30 30 28 13 31 24 32 41 37 25 23 25 31 22 15 13 31 31 32 30 27 46 29 25 30 25 16 19 8 31 29 9 10 26 22 25 28 21 12 29 29 12 36 31 30 20 10 9 15 31 35 19 11 9 13 25 18 24 6 11 17 36 25 10 36 10 27 32 15 18 14 11 16 22 26 11 24 11 9 39 48 24 18 22 26 10 19 34 36 21 10 19 12 34 33 27 25 15 9 17 32 34 9 12 10 16 23 10 9 10 8 34 6 12 20 12 9 13 14 27 25 11 18 26 16 14 13 3 4 9 17 8 18 13 9 8 18 21 23 7 5 3 9 13 19 27 20 15 28 19 15 11 23 6 6 27 9 6 19 8 15 6 8 24 18 22 28 20 7 8 13 6 11 6 6 12 29 10 21 10 12 7 25 28 25 6 8 3 3 7 8 12 4 5 3 6 7 7 3 2 3 6 7 12 5 4 21 5	Open. Hide. 62 59 43 62 23 12 12 10 23 13 13 19 28 27 23 18 21 18 30 18 39 62 62 62 59 59 62 62 62 59 49 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 59 49 41 34 40 34 38 48 34 48 36 50 36 34 28 54 50 56 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 54 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 46 35 47 56 56 47 62 62 56 56 56 62 56 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 32 9 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_52265437_52266526
seq2: B6Ng01-276F10.b_47_1145 (reverse)

seq1  CAGGCCAGA----AATTCCTATTTATTTTCCA-GGACTGCCTTGAGCTCA  45
      |||||||||    |||  ||  |||||||||| |||||| ||||||||||
seq2  CAGGCCAGACAGGAAT--CTTATTATTTTCCAGGGACTG-CTTGAGCTCA  47

seq1  TTA-TGGAGCTGAGAAGTTACAGCAG-AGATTGGCCATCCTGC-AGAG-C  91
      ||| |||||||||||||||||||||| |||||||||||||||| |||| |
seq2  TTATTGGAGCTGAGAAGTTACAGCAGAAGATTGGCCATCCTGCAAGAGCC  97

seq1  CAACAAGACTCTACTAAAACCTTT-ACAC-AAAGACTCTTGGCTT-GGTT  138
      |||||||||||||||||||||||| |||| ||||||||||||||| ||||
seq2  CAACAAGACTCTACTAAAACCTTTAACACAAAAGACTCTTGGCTTGGGTT  147

seq1  TGTCCAGTGGTCATTGGTTCTTCTGGTGCTAGGCCTGCTTTGATGCCAAC  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGTGGTCATTGGTTCTTCTGGTGCTAGGCCTGCTTTGATGCCAAC  197

seq1  AGCCCAAGTCAGAGGCATCTTTATGCTTCTCATATAAGTGCTGAGCACCT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGTCAGAGGCATCTTTATGCTTCTCATATAAGTGCTGAGCACCT  247

seq1  GGGGTCAGAATATGCAATCCTAGCCAGGGTTAACCTCCAGGTGGGTCCCA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGAATATGCAATCCTAGCCAGGGTTAACCTCCAGGTGGGTCCCA  297

seq1  CCCATCGCTGCTGTAGCTCCATCTGCAAGCATTACGTAGTTCCTTCCCTG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGCTGCTGTAGCTCCATCTGCAAGCATTACGTAGTTCCTTCCCTG  347

seq1  ATGGTTATGTGAGATAGATGGTGGAAAGAATCCTCACTAGATCATTGGCC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTATGTGAGATAGATGGTGGAAAGAATCCTCACTAGATCATTGGCC  397

seq1  AGTATGTTGCTTAGTTTTAGGCCAACTTGACACAAGCTAGAGTCATTTGG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTGCTTAGTTTTAGGCCAACTTGACACAAGCTAGAGTCATTTGG  447

seq1  GAGAGGGAACCTCAACTGAGGAACAATGACCCTACCCAATGGCCCTGAGG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAACCTCAACTGAGGAACAATGACCCTACCCAATGGCCCTGAGG  497

seq1  GCAAGTCTGAGGTTCATTTTCTTGATTGGTGATTGATGTGGAATGGACTC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTGAGGTTCATTTTCTTGATTGGTGATTGATGTGGAATGGACTC  547

seq1  AGCTCAATGTGGGTGGTGATACCCCTGGGCTGGTGGTCCTAGGTGCTATA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAATGTGGGTGGTGATACCCCTGGGCTGGTGGTCCTAGGTGCTATA  597

seq1  AGAAATAAGGCTGAGCAAGCCATGGCAAACAAGCCAGTAATCAGCGTTCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAGGCTGAGCAAGCCATGGCAAACAAGCCAGTAATCAGCGTTCC  647

seq1  TCCATGGCCTCTGGTGCTGTGCCTGCCTCGAGTGAGTGCCTTGACCTCTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGCCTCTGGTGCTGTGCCTGCCTCGAGTGAGTGCCTTGACCTCTC  697

seq1  TGGATGATGGACTATAAGTCCATATAATGGAATAAATCCTTTCCTCCCAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATGGACTATAAGTCCATATAATGGAATAAATCCTTTCCTCCCAA  747

seq1  AGTTACTTTCGGTCTTGGTGTTTTCTCACAGTGACAGAAACCCTAACTAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTTCGGTCTTGGTGTTTTCTCACAGTGACAGAAACCCTAACTAA  797

seq1  GACAGTTTGAGATGTAAAGGCCAAGCAAGTGCTTCCGTGATGATTTACCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTGAGATGTAAAGGCCAAGCAAGTGCTTCCGTGATGATTTACCT  847

seq1  CTAATTTGAAGAGTTCATCAGAAATATAGGGAGAATGACAGCTTAGTGTC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGAAGAGTTCATCAGAAATATAGGGAGAATGACAGCTTAGTGTC  897

seq1  ACACTCAGAGATCTGAAGGGCGCACTCTCATGGGAGCCTTTAACGCACTG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAGATCTGAAGGGCGCACTCTCATGGGAGCCTTTAACGCACTG  947

seq1  GAGAGTTCCTCATAGATGATGGAGGGACAGTTCACATTCCATCAAAGAAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCCTCATAGATGATGGAGGGACAGTTCACATTCCATCAAAGAAT  997

seq1  ACCCTAACGGAAGCTGCTAGAATAGACGTGTCAATCTCTAAGCAGATGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACGGAAGCTGCTAGAATAGACGTGTCAATCTCTAAGCAGATGAA  1047

seq1  GCAGCACCAAGCATAGAAAATCACAGAACTCAGCCTCCATACTGATGAAT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACCAAGCATAGAAAATCACAGAACTCAGCCTCCATACTGATGAAT  1097

seq1  TC  1090
      ||
seq2  TC  1099

seq1: chr13_52117735_52118088
seq2: B6Ng01-276F10.g_70_423

seq1  TCATCTAGCACAAAGCTACACCTTCAGCTCAGTTCCCATTAGGTCTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGCACAAAGCTACACCTTCAGCTCAGTTCCCATTAGGTCTCTAT  50

seq1  GAATGTGTGTGTGTGTGTGTGTGTGATCAGAACTGAACAACTGTAGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTGTGTGTGTGTGTGTGTGATCAGAACTGAACAACTGTAGATTC  100

seq1  CCTATTCGTCACTTAGTGTTCCGGTGCTGTAAAACAATGCTCCAGGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCGTCACTTAGTGTTCCGGTGCTGTAAAACAATGCTCCAGGTTGG  150

seq1  GTAATTTGTAAGTGAAAAGGCTGATATTGGCTCGTGGTTCTGGAGGCTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTGTAAGTGAAAAGGCTGATATTGGCTCGTGGTTCTGGAGGCTCG  200

seq1  CAAACACGGTGGCAGGGTCAGCTTCTGATGAGAAGAAAAGGAACAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACGGTGGCAGGGTCAGCTTCTGATGAGAAGAAAAGGAACAGACAT  250

seq1  GCCAGAATGTTTTCAACATGGTGGTTGAAAGTTAGAACATTGAGGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAATGTTTTCAACATGGTGGTTGAAAGTTAGAACATTGAGGTTCTC  300

seq1  AGTCTGCCCTTGGGGATTATGCAAGAGGATAGAAGGGGGTGGGGTGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCCCTTGGGGATTATGCAAGAGGATAGAAGGGGGTGGGGTGGGTA  350

seq1  GAGA  354
      ||||
seq2  GAGA  354

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BAC

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Alignment Information