BAC Information

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BAC

Clone NameB6Ng01-276L02
Chromosome13 (Build37)
Map Location 7,455,641 - 7,456,724
singlet/doubletsinglet
Overlap genenone
Upstream genePitrm1, Pfkp, LOC100039532, LOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276L02.bB6Ng01-276L02.g
ACCGA077411GA077412
length1,0731,154
definitionB6Ng01-276L02.b B6Ng01-276L02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtggtgtctgagagaaactcaaatggataaataacatgcata
gcaaacatagactttatcagtttctagaaactcctttagttaagtgtaga
aaacactttaaaatgtttagcctactgtacattaagggtttatacaaaat
acaccacaataatgtaatctactgaatggactggattaaaaggtgatcct
tgatataccattgaaaatattgtgaaaatatgactttcttgctctttttc
tccacccagttcctaattaagtgttcattatacaaactaccaaactgtct
tacctcttttaattctcctacttaatgtgcactaatgacatacaaattag
cacagaaacactagacattgcttatcatttccgacattttttatttaata
atagttatagaattatcttgttatttaggttttgctttcttcatgtatac
atccacatgcgcatgcacacacacacgcacacacacacgcacacacacac
acacacacacacacacacttcaaatagaaaccattactctctccattgtt
acagtgattctaaaagaaagatatgggaggtgcagccttgaaaacttgtg
tgtaaggagaaggggacatctctatattatttgggttttctgtcagtgga
agagttccttaatgaacaactcacaaacaaaatgtatttatttgggttcc
caattccataaatgtcattcatagttagttgtacccatgaaattcaacca
aaacctcatgcagggaaagcatgaggcagaggacatccattcacattgtg
gcagtaaggaaacagaagataagattgggaccaggctggaccaaactccc
gaaatgcttccatgtttctactgccctatttctaccagttaggctccacc
ccccccccaattgctccatagtctccccaaattcccaaccagttacatat
attcaaggcatgaaccctgtagaggaaattcagactatagcagtttgttg
tttgatgattgatgatgatgatgattgatgatgcagtgcatccaggcaca
aggagatgagacatgtcctatgt

gaattctcacctgaggtaataccgaatggctgagaagcacctgaaaaaaa
atgttccgcatctttaatcaccagggaaatgcaaatcagaacaaccccga
gattccacctcacatcagtcagaatggctaagatcaaaaactcaggtgac
agcagatgctggcgaggatgtggagaaagaggaaccctcctccattgttc
atgggattgcaagcttgtacaaccactctggaaatcagtctggtggttcc
ccagaaaataggacatagtactactggaggatcccgcaatatgtctcctg
ggcatatatctagaagatgttccaaccggtaagaaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagaggaatggattcagagaatgtggtacatgaaacca
tggagtactattcagctattaaaaagaatgagtttatgaaattcctaggc
aagtggatggagctggagggcttcatcctgagtgaggtaacccaatcaca
aaagaactcacatgatatgtactcactgataagtggatattagtccagaa
acttagaatacccaagatataatacaaaattcgcaaaacacatgaaactc
aagaagaacaaagaccaatctgtggacactttgccccttgttagaattgg
gaacaaaatacccatggaaggaattacagagactaagtttggagctgaga
cgaaaggatggaccatctagagactgccatacccagggatccatcccata
atcagcttccaaacgctgacaccattgtatataccagcaagattttgctg
aaagaacccagatatagctgtctcttgtgagactatgcaggggcctagca
acacagaagtggatgctcacagtcacctattggatggatcacagggctcc
caatggaggaactagaaaaagtacccaaggagctaaggaatctgcaacct
atagtggaacacgttattgaactacagtaccccccagagctcgtgtttct
agcctgcatatgtatcagaggatggcatagttggcattcaatgagaagag
aagtcattgtctgcgactttttatgcttctgttacaaggtacaccagagc
taga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7455641_7456724
seq2: B6Ng01-276L02.b_46_1118 (reverse)

seq1  ACATAGGACATGTCTCATTCCTCCTTTGTGCCTGGATGCACTGCAATCAA  50
      ||||||||||||||||||  |||| ||||||||||||||||||| ||| |
seq2  ACATAGGACATGTCTCAT--CTCC-TTGTGCCTGGATGCACTGC-ATC-A  45

seq1  TCAATCAATCAATCAATCAATCAATCAATCAAACAAACAAACTGCTATAG  100
      |||||| ||| ||| ||| ||||||| ||||||| |||||||||||||||
seq2  TCAATC-ATC-ATC-ATC-ATCAATC-ATCAAAC-AACAAACTGCTATAG  89

seq1  TCTGAAATTTCCTCTACA-GGTTCATGCCTTGAATATATGTAACTGGTTT  149
      |||| ||||||||||||| |||||||||||||||||||||||||||| ||
seq2  TCTG-AATTTCCTCTACAGGGTTCATGCCTTGAATATATGTAACTGG-TT  137

seq1  GGGAATTTGGGGAGACTATGGAGCAATT-GGGGGGGGGTGGAGCCTAACT  198
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGGAATTTGGGGAGACTATGGAGCAATTGGGGGGGGGGTGGAGCCTAACT  187

seq1  GGTAGAAATAGGGCAGTAGAAACATGGAAGCATTTCGGGAGTTTGGTCCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAATAGGGCAGTAGAAACATGGAAGCATTTCGGGAGTTTGGTCCA  237

seq1  GCCTGGTCCCAATCTTATCTTCTGTTTCCTTACTGCCACAATGTGAATGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCCCAATCTTATCTTCTGTTTCCTTACTGCCACAATGTGAATGG  287

seq1  ATGTCCTCTGCCTCATGCTTTCCCTGCATGAGGTTTTGGTTGAATTTCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCTGCCTCATGCTTTCCCTGCATGAGGTTTTGGTTGAATTTCAT  337

seq1  GGGTACAACTAACTATGAATGACATTTATGGAATTGGGAACCCAAATAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAACTAACTATGAATGACATTTATGGAATTGGGAACCCAAATAAA  387

seq1  TACATTTTGTTTGTGAGTTGTTCATTAAGGAACTCTTCCACTGACAGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTGTTTGTGAGTTGTTCATTAAGGAACTCTTCCACTGACAGAAA  437

seq1  ACCCAAATAATATAGAGATGTCCCCTTCTCCTTACACACAAGTTTTCAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATAATATAGAGATGTCCCCTTCTCCTTACACACAAGTTTTCAAG  487

seq1  GCTGCACCTCCCATATCTTTCTTTTAGAATCACTGTAACAATGGAGAGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACCTCCCATATCTTTCTTTTAGAATCACTGTAACAATGGAGAGAG  537

seq1  TAATGGTTTCTATTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTTTCTATTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGT  587

seq1  GTGTGTGTGCGTGTGTGTGTGCATGCGCATGTGGATGTATACATGAAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCGTGTGTGTGTGCATGCGCATGTGGATGTATACATGAAGAA  637

seq1  AGCAAAACCTAAATAACAAGATAATTCTATAACTATTATTAAATAAAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACCTAAATAACAAGATAATTCTATAACTATTATTAAATAAAAAA  687

seq1  TGTCGGAAATGATAAGCAATGTCTAGTGTTTCTGTGCTAATTTGTATGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGAAATGATAAGCAATGTCTAGTGTTTCTGTGCTAATTTGTATGTC  737

seq1  ATTAGTGCACATTAAGTAGGAGAATTAAAAGAGGTAAGACAGTTTGGTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGCACATTAAGTAGGAGAATTAAAAGAGGTAAGACAGTTTGGTAG  787

seq1  TTTGTATAATGAACACTTAATTAGGAACTGGGTGGAGAAAAAGAGCAAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAATGAACACTTAATTAGGAACTGGGTGGAGAAAAAGAGCAAGA  837

seq1  AAGTCATATTTTCACAATATTTTCAATGGTATATCAAGGATCACCTTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATATTTTCACAATATTTTCAATGGTATATCAAGGATCACCTTTTA  887

seq1  ATCCAGTCCATTCAGTAGATTACATTATTGTGGTGTATTTTGTATAAACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTCCATTCAGTAGATTACATTATTGTGGTGTATTTTGTATAAACC  937

seq1  CTTAATGTACAGTAGGCTAAACATTTTAAAGTGTTTTCTACACTTAACTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTACAGTAGGCTAAACATTTTAAAGTGTTTTCTACACTTAACTA  987

seq1  AAGGAGTTTCTAGAAACTGATAAAGTCTATGTTTGCTATGCATGTTATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTTTCTAGAAACTGATAAAGTCTATGTTTGCTATGCATGTTATTT  1037

seq1  ATCCATTTGAGTTTCTCTCAGACACCACCAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTGAGTTTCTCTCAGACACCACCAGAATTC  1073


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