BAC Information

Click to search

BAC

Clone NameB6Ng01-278N07
Chromosome13 (Build37)
Map Location 5,890,724 - 5,891,099
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6
Downstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278N07.bB6Ng01-278N07.g
ACCGA078970GA078971
length3761,211
definitionB6Ng01-278N07.b B6Ng01-278N07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tattttccttttagggaaactacacttcccgagaaaaatctttaaaatac
atcacttgattaaccaagcaagaacattaacacataaggggaaaatcaaa
atagaaggatatgccctgtccccagtggaaagggcctctctctctaggcc
cttctaagacatggggctgtgaatcctggaagaagaacttcaaagtaggg
tcctccttacggaaatggtgacgtctgcaaataggcagcaatttcacaga
aggccattcctttgtctagctgatttctggttaatttgagtttccttctt
atgtgtatgagtgtgtctctgtatgtatctctggggcatgtagttgtatt
ggtgtgtgtttgtgtgtgagtgtgtg

gaattcttttaatataatgaacagataaacacagaagaaagagaatataa
aagcaggaaaaccagagaccaacattctgcttaacataagtaaaaatctc
ttcatcaaatatttgtgaaacaaatgcattaatctgcccaggggacaata
tgagtcaatatgtccaaaggacaatacaattttgtcgatcaatcaaaaca
tcaatcaacgtgattctcactattgacagaatgaaagtcaagcatcccat
ggttagcttaatagatgcaaaaagggatctgatagcatttaatatttatg
attagtataagaaacaggttgagaatagagtatcttcaatatggtaagaa
atagccaagtaaaacctacagctaatattttatttactttctagtattag
attccttcctcatatgatccagcacacatcaaaggaaaactcttttccat
cctaaaactcagtgttcaatggagatcttagcctgtgtgaagagagaagc
taagaagcagtaaaggatgaacatgtgtgaaaggacttgtgactgcattc
agtcagataatatagcagacagtttggcaattctaactcttaaaagtgtc
ctcaaacaattttacaaggccacaagacaaattaatacttaacagttagg
agaacttatgtataccggtaacaaataattgaatcacatttcttagtgct
atcaacaataaaatcctgaagaattaaaatttcaaagatacactcaacaa
aaacctgcaagacccacagactgacaactgtaataaattacttgaggaaa
ctaaaggtgagtttactaaatgaaagattacactagatttgtggactgga
aaactcagggctctatgaatagcatcctacccagaagattatcaacccag
gacaaaccacataagagtagtgcctctttgtagaaatgtgtaaacataac
ttgaacttcacaagggaacaaaggatttgttattcttaaaaacaaacaaa
actgaggacgaggagtttcttcattctacccacttatagacttattataa
agctatatgagactggtgggtcaatactgtaagacagatctcattaataa
cattataggaatatgcaaatggaattatactatgttagcctgaatggatc
ttgaaggcaagccttaattaatttaatggaggagcaacctatatgttgaa
cacagaagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5890724_5891099
seq2: B6Ng01-278N07.b_55_430

seq1  TATTTTCCTTTTAGGGAAACTACACTTCCCGAGAAAAATCTTTAAAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTTTTAGGGAAACTACACTTCCCGAGAAAAATCTTTAAAATAC  50

seq1  ATCACTTGATTAACCAAGCAAGAACATTAACACATAAGGGGAAAATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTGATTAACCAAGCAAGAACATTAACACATAAGGGGAAAATCAAA  100

seq1  ATAGAAGGATATGCCCTGTCCCCAGTGGAAAGGGCCTCTCTCTCTAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGATATGCCCTGTCCCCAGTGGAAAGGGCCTCTCTCTCTAGGCC  150

seq1  CTTCTAAGACATGGGGCTGTGAATCCTGGAAGAAGAACTTCAAAGTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGACATGGGGCTGTGAATCCTGGAAGAAGAACTTCAAAGTAGGG  200

seq1  TCCTCCTTACGGAAATGGTGACGTCTGCAAATAGGCAGCAATTTCACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTACGGAAATGGTGACGTCTGCAAATAGGCAGCAATTTCACAGA  250

seq1  AGGCCATTCCTTTGTCTAGCTGATTTCTGGTTAATTTGAGTTTCCTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATTCCTTTGTCTAGCTGATTTCTGGTTAATTTGAGTTTCCTTCTT  300

seq1  ATGTGTATGAGTGTGTCTCTGTATGTATCTCTGGGGCATGTAGTTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGAGTGTGTCTCTGTATGTATCTCTGGGGCATGTAGTTGTATT  350

seq1  GGTGTGTGTTTGTGTGTGAGTGTGTG  376
      ||||||||||||||||||||||||||
seq2  GGTGTGTGTTTGTGTGTGAGTGTGTG  376


| Home | SequenceCutter | Blast | Download |