BAC Information

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BAC

Clone NameB6Ng01-279G21
Chromosome13 (Build37)
Map Location 5,851,058 - 5,851,679
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279G21.bB6Ng01-279G21.g
ACCGA079414GA079415
length1,168622
definitionB6Ng01-279G21.b B6Ng01-279G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaagggctgagaagcacctgaaaaaaat
gttcaacatccttcatcatcagggaaatgcaaatcaaaacaaccttaaga
ttaaacctcacaccagtcagaatggctaagatcaaaaattcagatgacag
cagatgctggcaaagatgtggtgaaagaacaacactccttcactgctggt
gggattgcaagcttgtaaaaccactctttaagtcagtctggaggttcctc
agaaaattggatataatactaccggaagatccaccaatgcctctcctggg
catatacccagaagaagttccaactggtaataagagcacatgctccacta
tgttcatagaagccttatttataatagtcagaagctggagagaacccaga
tgttcctcaacagaagaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaacaatcaatttatgaaattcttggaca
aatggatgtatctggaggatttcatccttagtgaggtaacacaaccacaa
aagaagtcattagatatgcactcactgataagtggatattagtccagaac
catagaacacccaagatacaatttgcaaaacacaagaaaatcaaaaagag
ggaagaccaatgtgtggatacttcattcccccttagaataggaaacaaaa
tacccatgaaaggagttacagagacaaagtttggagctaagacgaaagga
tggactatccagagactaccccactcagggatccatcccataatcagcca
ccaaacccagacactattgcatatgccagaaagattttgccgaattgacc
ctgttatagctatatcgtatgaggctatgccagtgcttggcaaatacaga
agtggatgctcacagtcatctataagatggaacacagggtccccagtgga
gaagctagagagagcaaccaaggaactgaagggtctgcaaccctataggt
ggaacaacaatatgaactaccaataatgtcagagctcatattctgtagct
gcatattgtaacagaagatggcctagtggcaatcaacaggaagaagagag
ccctgattgcaacttacatggcccattacagggaatgcaaggctaaaacc
cggggggtggtggtggct
gaattctaaggttgtttacagcaagaacttgtaggcagaaggtaagaatg
atggtcatacataataaatacaagaagatgtcatcataaactcttaagtt
gttcaaaaaaaaaaagagtaagaacatgagaaaatatccattgagtaaaa
gaatggaagattgccactttcaaggaagatgaagtcatatcctatacatt
actaagttatagttgtggttgttggtaattacttttaatctcattttaat
aagttgtaaatgatgtgaagggttggagagatggctcagccattaaaggc
tcacaactaaatgataatgaaaattgaagtgacaataatgccttgtaaaa
agttagcaatcactgggaattttctaagaaaattaaattttataaaagga
agtaaaccaaatagccttcatgtactaaacaggtacaaatcaatatgctt
tgaaaaaaataaggcttaggcctctgtgggagaggatttgcttagtctta
tgagactagatgttccaggttgggttggtacccaaggaagtctcgccctt
ctctgatgaaaaggggagggggcaatgtcctgaggatttataagggtgga
attgggaagagaggagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5851058_5851679
seq2: B6Ng01-279G21.g_66_687 (reverse)

seq1  CCCTCCCTCCTCTCTTCCCAATTCCACCCTTATAAATCCTCAGGACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCTCTCTTCCCAATTCCACCCTTATAAATCCTCAGGACATTG  50

seq1  CCCCCTCCCCTTTTCATCAGAGAAGGGCGAGACTTCCTTGGGTACCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCCTTTTCATCAGAGAAGGGCGAGACTTCCTTGGGTACCAACC  100

seq1  CAACCTGGAACATCTAGTCTCATAAGACTAAGCAAATCCTCTCCCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGGAACATCTAGTCTCATAAGACTAAGCAAATCCTCTCCCACAGA  150

seq1  GGCCTAAGCCTTATTTTTTTCAAAGCATATTGATTTGTACCTGTTTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAGCCTTATTTTTTTCAAAGCATATTGATTTGTACCTGTTTAGTA  200

seq1  CATGAAGGCTATTTGGTTTACTTCCTTTTATAAAATTTAATTTTCTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGCTATTTGGTTTACTTCCTTTTATAAAATTTAATTTTCTTAGA  250

seq1  AAATTCCCAGTGATTGCTAACTTTTTACAAGGCATTATTGTCACTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCCAGTGATTGCTAACTTTTTACAAGGCATTATTGTCACTTCAAT  300

seq1  TTTCATTATCATTTAGTTGTGAGCCTTTAATGGCTGAGCCATCTCTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTATCATTTAGTTGTGAGCCTTTAATGGCTGAGCCATCTCTCCAA  350

seq1  CCCTTCACATCATTTACAACTTATTAAAATGAGATTAAAAGTAATTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCACATCATTTACAACTTATTAAAATGAGATTAAAAGTAATTACCA  400

seq1  ACAACCACAACTATAACTTAGTAATGTATAGGATATGACTTCATCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACAACTATAACTTAGTAATGTATAGGATATGACTTCATCTTCCT  450

seq1  TGAAAGTGGCAATCTTCCATTCTTTTACTCAATGGATATTTTCTCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGGCAATCTTCCATTCTTTTACTCAATGGATATTTTCTCATGTT  500

seq1  CTTACTCTTTTTTTTTTTGAACAACTTAAGAGTTTATGATGACATCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCTTTTTTTTTTTGAACAACTTAAGAGTTTATGATGACATCTTCT  550

seq1  TGTATTTATTATGTATGACCATCATTCTTACCTTCTGCCTACAAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTATTATGTATGACCATCATTCTTACCTTCTGCCTACAAGTTCTT  600

seq1  GCTGTAAACAACCTTAGAATTC  622
      ||||||||||||||||||||||
seq2  GCTGTAAACAACCTTAGAATTC  622