BAC Information

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BAC

Clone NameB6Ng01-279M04
Chromosome13 (Build37)
Map Location 80,294,772 - 80,295,840
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780
Downstream geneEG666933, Arrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279M04.bB6Ng01-279M04.g
ACCGA079659GA079660
length1,2001,062
definitionB6Ng01-279M04.b B6Ng01-279M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaaactgataaaaatcttcagcaaagtagctggatataaaat
taactcatacaaatcagtggccttcccctacacaaaggataaataggctg
agacaaaaattaggaaaacaacacttttcaccatagtcacaaaggatata
aagtaccttgttgtgagtctaactaaggaagtgaaagatctgtatgttaa
gaacttcaagtctctgtagaaagaaatcaaagaaggtctcagaagatgga
aagatctcccatgcttatgcattgacagcattaatagagtaaaaatggcc
atcttgctgaaagcaacctacagattcaatgcaatcctatcaaaaatcca
actcaattcttcattgtgttagaaagagcaattttcaaattcatctggaa
taacaaaaaacctaggatactgaaaactattctcaacaaagaaagaacat
ctggtggaatcatcatccctgtcctcaagctgtactgcagagcaattgtg
ataaaaactaaatggtattggttcagtgaaaggcaggtagatcaatggag
tagaatttaagacccagaaatgaacccacacacctttggtaacttgatct
ttgacaaaggagcaaaaactattgggtggaaaaaagacagcatttttgat
atatggtactggctcaactggtgattagtatgtagaagaatgaaaatcaa
cctgttcttatctccttgtaaaaagttcaagtccaagataatcaaggacc
tcaacaaaaaaacagaaacactgaaactcttagtggacaaaatggggaag
agcctcaaacatatgggcaaaggggaaaattttctgaacagaaaacccaa
tggcttatattaaaagatcaagaatcaataaatgtgacctcataaaatca
caaaagttctggaaggcaaaggacactgtcaataagataaaaaaaggcaa
ccaaaagattagggaaaagatcctttatcaatccctgcatctgagaaggg
cctatacctaatatataccaggaacctccagagttaccacctcctagaga
cccaaaatccctataaaattggggatacagacctaaccaagatcctcacc
tgaggaataatccaattgcctagaaccccctcactaaatatcagcatctt
agtcatcagtggagatgccaattcaaacagccctgggatcccaccttgac

gaattcaaggtggagtgctacgtagtggggcattcttgtatctacacaca
gtacgcaaagatggcaaggcttttgtccaacaattttgattttcaattct
caaataggattttccttaaaatattttatttttgcttttgcatatgcatc
acccttctcaccgatatggagtagtattatattacagacaggaggtttta
tgattttcaccttttaatttgcatgccaagtatcatatcttcatgtacac
tcatatctagtatggcagcaaatggaaagtttcttaatgttacttttact
tgtgggcgtctggtgattgttttcttcgtcactcaaattaattttacaca
tttacttgttcaagtttgttctgtttttctctgggatacatttatatgtg
tactaacttcttgagtaacatttttctaggattttaaaatttttatttaa
tggtaggtaggtattttttttcctcattttcccctgaaagatgacatatt
tttaatatgacactggaaaacagaagcgtaaagtaagggatactaattta
aaatcaagtagcttcaaagcagaggctgctggcagctttcattactgcca
ccccttggttaccaggttcatcattacattctctgatgttcaaacgagac
tcctttttccaggtctgcagtgaacaaccactctttcctgccttttaagg
aggttagcatcacatgttaagtccatccaaataacccgaggaacgcttct
attcttagatcttctcagttatctgaaaagccttgatatttctcatttat
ttgaacacctttgtccagagattagaatggggatgttttcgtggagaaag
gcgttctccaaaaagtgactctcaaaatattgagcctgtcaataggaatt
tggttattttatgtatatttgtgggttagtttgttttgtttagttttact
ccttaactccaggaaataagtctgtttacagaatgttacatgttgacaaa
tatttatcagtagaaataacaattctttagatatcatggaatttctaggg
tttttgttatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80294772_80295840
seq2: B6Ng01-279M04.g_63_1124 (reverse)

seq1  ATATAAACAAAAAAACCTAGAAA-TCCAATATAATTATAAAGAATTGTTA  49
      ||||||   ||||| |||||||| ||||  |||  | |||||||||||||
seq2  ATATAA--CAAAAACCCTAGAAATTCCATGATA--TCTAAAGAATTGTTA  46

seq1  ATTTTCCTAATGATAAAATATTTGTCACCATGTACAATTCTGTAAACAGA  99
         || ||| |||| |||||||||||| ||||||  ||||||||||||||
seq2  ---TTTCTACTGAT-AAATATTTGTCAACATGTAACATTCTGTAAACAGA  92

seq1  CTTATTT-CTTGAACTAAAGAGTAAAAACTAAACAAAAACAAACTAACCC  148
      ||||||| || ||  ||| |||| |||||||||| |||||||||||||||
seq2  CTTATTTCCTGGAGTTAAGGAGT-AAAACTAAAC-AAAACAAACTAACCC  140

seq1  ACAAATATACATAAAATAACCAAATTCCTATTGACAGGCTCAATATTTTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATACATAAAATAACCAAATTCCTATTGACAGGCTCAATATTTTG  190

seq1  AGAGTCACTTTTTGGAGAACGCC-TTCTCCACGAAAACATCCCCATTCTA  247
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAGTCACTTTTTGGAGAACGCCTTTCTCCACGAAAACATCCCCATTCTA  240

seq1  ATCTCTGGACAAAGGTGTTCAAATAAATGAGAAATATCAAGGCTTTTCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGACAAAGGTGTTCAAATAAATGAGAAATATCAAGGCTTTTCAG  290

seq1  ATAACTGAGAAGATCTAAGAATAGAAGCGTTCCTCGGGTTATTTGGATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAGAAGATCTAAGAATAGAAGCGTTCCTCGGGTTATTTGGATGG  340

seq1  ACTTAACATGTGATGCTAACCTCCTTAAAAGGCAGGAAAGAGTGGTTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACATGTGATGCTAACCTCCTTAAAAGGCAGGAAAGAGTGGTTGTT  390

seq1  CACTGCAGACCTGGAAAAAGGAGTCTCGTTTGAACATCAGAGAATGTAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGACCTGGAAAAAGGAGTCTCGTTTGAACATCAGAGAATGTAAT  440

seq1  GATGAACCTGGTAACCAAGGGGTGGCAGTAATGAAAGCTGCCAGCAGCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACCTGGTAACCAAGGGGTGGCAGTAATGAAAGCTGCCAGCAGCCT  490

seq1  CTGCTTTGAAGCTACTTGATTTTAAATTAGTATCCCTTACTTTACGCTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGAAGCTACTTGATTTTAAATTAGTATCCCTTACTTTACGCTTC  540

seq1  TGTTTTCCAGTGTCATATTAAAAATATGTCATCTTTCAGGGGAAAATGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCAGTGTCATATTAAAAATATGTCATCTTTCAGGGGAAAATGAG  590

seq1  GAAAAAAAATACCTACCTACCATTAAATAAAAATTTTAAAATCCTAGAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATACCTACCTACCATTAAATAAAAATTTTAAAATCCTAGAAA  640

seq1  AATGTTACTCAAGAAGTTAGTACACATATAAATGTATCCCAGAGAAAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTACTCAAGAAGTTAGTACACATATAAATGTATCCCAGAGAAAAAC  690

seq1  AGAACAAACTTGAACAAGTAAATGTGTAAAATTAATTTGAGTGACGAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAACTTGAACAAGTAAATGTGTAAAATTAATTTGAGTGACGAAGA  740

seq1  AAACAATCACCAGACGCCCACAAGTAAAAGTAACATTAAGAAACTTTCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCACCAGACGCCCACAAGTAAAAGTAACATTAAGAAACTTTCCA  790

seq1  TTTGCTGCCATACTAGATATGAGTGTACATGAAGATATGATACTTGGCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGCCATACTAGATATGAGTGTACATGAAGATATGATACTTGGCAT  840

seq1  GCAAATTAAAAGGTGAAAATCATAAAACCTCCTGTCTGTAATATAATACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTAAAAGGTGAAAATCATAAAACCTCCTGTCTGTAATATAATACT  890

seq1  ACTCCATATCGGTGAGAAGGGTGATGCATATGCAAAAGCAAAAATAAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATATCGGTGAGAAGGGTGATGCATATGCAAAAGCAAAAATAAAAT  940

seq1  ATTTTAAGGAAAATCCTATTTGAGAATTGAAAATCAAAATTGTTGGACAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGAAAATCCTATTTGAGAATTGAAAATCAAAATTGTTGGACAA  990

seq1  AAGCCTTGCCATCTTTGCGTACTGTGTGTAGATACAAGAATGCCCCACTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTGCCATCTTTGCGTACTGTGTGTAGATACAAGAATGCCCCACTA  1040

seq1  CGTAGCACTCCACCTTGAATTC  1069
      ||||||||||||||||||||||
seq2  CGTAGCACTCCACCTTGAATTC  1062