BAC Information

Click to search

BAC

Clone NameB6Ng01-281J03
Chromosome13 (Build37)
Map Location 107,989,853 - 107,990,580
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322
Downstream geneLOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281J03.bB6Ng01-281J03.g
ACCGA081014GA081015
length996729
definitionB6Ng01-281J03.b B6Ng01-281J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaagctactctacatgtctgctataggcgaacaaataacttgg
tgagttctagtcaatgggagacaggttctcaaagtcagagaaggaattca
ggatggaaagagaacagccaggatgaaccctggatagtcggatatgtcag
taagagggtatgcacacatatacatacattcatcacatagacacatgtgc
atacatgtatatagacatatatgtatgtatatatgaaatatgtgggagag
tatcatacatgtattgcatagctctaattattgatctagaggtcatcatt
agcaacatgtaaattcggcacctcagtctttggtttctttgccaatgtcc
tatagaatgaaccaggaccttgaaaaattggttgctcatagtagggcttt
aaaaaggaaagtactaggcatgcctgcgacatctgataataacagaaatt
aagtaggaaagatggaacaggggaagaaagagacaggaagggaagaacag
aatgagacctgaattcaaaaaacgacacaacacaaagtcccaaagacttc
ctaggagccaaatctgcaacaattggagcagcaacattatctctacaaga
acattataacatatagcattaaataattatcactatgttgtagagttaaa
ttgttaaacttctctaaactccctggtgggtgtgcatacctcctctacac
ccacccaatttgtttagggtttcacgaattgaaacacacacacacacaca
cacacacacacacacacactcacggcatgcagcctttacttttaatatgc
cctttaacagcacaatggttggaccactccctaactctaacttggttagc
cacatttccttccctccgatatcccctgaagttaatgcttaactaaatct
atatttcatctttgctgccctggacccttctggggtagcccctcctgggg
accttttcccccttggacctacatttgggctgtccctcccccctgc
gaattccttaagatagtcacaggtaaagaaattctgaagactcttcttgg
agaatggcttcttttgccttctacatggtggtaacattgtgtttgttagt
gatgctattgtccttgtctggtgaatatgccaactctcttcttcatttga
caatacagatgttggcttgcttaccttaaggtttctattgttgcaacaaa
acaccatgaccagaaagcaagttggggagggaagggcttatttagctttc
acttccacattgatgtttatccctgaaggaagtcaggacaggcactcaca
ccaggctgcaacctggagtcaggaggtgatgtggaggctgtgaggagtgc
tgcttattggctggcttcacaggactttcagcctgctttcttatagaatg
caggaccatcagcccaggatggctccacccacaatgggctgccttccctc
attgattactaattgaaaaaatgccctaggctgactctcatgacgatatt
tctacaactgagggctccttcctctctgatgactctatcttgtgtcaagt
tgacataagaacagccagtacacctgcccaacacctttatcccttttcta
tcaacttctctaccttgtaccaagagttaaaaactctggttgtcagcaca
gaactcgctatatgtacacgttggcttccctttgcataaaaagatatttt
tttattccaggtacagggcttttagctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107989853_107990580
seq2: B6Ng01-281J03.g_70_798

seq1  GAATTCCTTAAGATAGTCACAGGTAAAGAAATTCTGAAGACTCTTCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGATAGTCACAGGTAAAGAAATTCTGAAGACTCTTCTTGG  50

seq1  AGAATGGCTTCTTTTGCCTTCTACATGGTGGTAACATTGTGTTTGTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCTTCTTTTGCCTTCTACATGGTGGTAACATTGTGTTTGTTAGT  100

seq1  GATGCTATTGTCCTTGTCTGGTGAATATGCCAACTCTCTTCTTCATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATTGTCCTTGTCTGGTGAATATGCCAACTCTCTTCTTCATTTGA  150

seq1  CAATACAGATGTTGGCTTGCTTACCTTAAGGTTTCTATTGTTGCAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGATGTTGGCTTGCTTACCTTAAGGTTTCTATTGTTGCAACAAA  200

seq1  ACACCATGACCAGAAAGCAAGTTGGGGAGGGAAGGGCTTATTTAGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGACCAGAAAGCAAGTTGGGGAGGGAAGGGCTTATTTAGCTTTC  250

seq1  ACTTCCACATTGATGTTTATCCCTGAAGGAAGTCAGGACAGGCACTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACATTGATGTTTATCCCTGAAGGAAGTCAGGACAGGCACTCACA  300

seq1  CCAGGCTGCAACCTGGAGTCAGGAGGTGATGTGGAGGCTGTGAGGAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGCAACCTGGAGTCAGGAGGTGATGTGGAGGCTGTGAGGAGTGC  350

seq1  TGCTTATTGGCTGGCTTCACAGGACTTTCAGCCTGCTTTCTTATAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTGGCTGGCTTCACAGGACTTTCAGCCTGCTTTCTTATAGAATG  400

seq1  CAGGACCATCAGCCCAGGATGGCTCCACCCACAATGGGCTGCCTTCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCATCAGCCCAGGATGGCTCCACCCACAATGGGCTGCCTTCCCTC  450

seq1  ATTGATTACTAATTGAAAAAATGCCCTAGGCTGACTCTCATGACGATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTACTAATTGAAAAAATGCCCTAGGCTGACTCTCATGACGATATT  500

seq1  TCTACAACTGAGGGCTCCTTCCTCTCTGATGACTCTATCTTGTGTCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAACTGAGGGCTCCTTCCTCTCTGATGACTCTATCTTGTGTCAAGT  550

seq1  TGACATAAGAACAGCCAGTACACCTGCCCAACACCTTTATCCC-TTTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGACATAAGAACAGCCAGTACACCTGCCCAACACCTTTATCCCTTTTCTA  600

seq1  TCAACTTCTCTACCTTGTACCAAGAGTT-AAAACTCTGGTTGTCAGCACA  648
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCAACTTCTCTACCTTGTACCAAGAGTTAAAAACTCTGGTTGTCAGCACA  650

seq1  GAACTCGCTATATGTACACGTTGGCTTCCTTATGTAAAACAGTGATTTTT  698
      ||||||||||||||||||||||||||||| | || | || |  ||| |||
seq2  GAACTCGCTATATGTACACGTTGGCTTCCCTTTGCATAA-AAAGATATTT  699

seq1  TTTTATTCCAGGTACAGGGCTTTTAGCTTA  728
      ||||||||||||||||||||||||||||||
seq2  TTTTATTCCAGGTACAGGGCTTTTAGCTTA  729