BAC Information

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BAC

Clone NameB6Ng01-284E17
Chromosome13 (Build37)
Map Location 96,185,151 - 96,186,243
singlet/doubletsinglet
Overlap genenone
Upstream geneAp3b1, Tbca, Otp, Wdr41, Pde8b, Zbed3, Aggf1
Downstream geneCrhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2, Sv2c, LOC667582, 1200014M14Rik, 9330128J19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284E17.bB6Ng01-284E17.g
ACCGA083033GA083034
length1,1861,101
definitionB6Ng01-284E17.b B6Ng01-284E17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatggctgagaagtacctaaaaaaaaa
aaaaaaaaaaaaaaaaaaaatgttcaacatccttagtcatcagggaaatg
taaattaaaacaaccctgagattccacctcacaccagtcagaatggttaa
gatcaaaaactcaggtgacagcagatgctggcgaggatgtggagaaagag
gaatactcctccactgctggtgggattgcaagctggtacaaccactctgg
aaatcagtttggcggttcctcagaaaattgaacatagtaatacctgtgga
cccagcaataccactcctgggcatatacccagaagattctctaatatgta
ataatgacacatgctccagtatgttcatagcagccttatttataatagcc
agaagctggaaagaacccagatgtcccttaacagaggaatggattcagaa
aatgtggtacatttacaaaatggagtactactcagctattatgaattcat
gaaatccttaggcaaatggatagaactagacaatatcatcctgagtgaag
taacccaatcacaaaagaacacatatgatatgcactcactgataagtgga
tattagcccagaagcttggaatacccaagatacaattcacagaccacatg
aagctcaagaagaaggaagaccaaagtgtggatgctttgattcttcttag
aaggaggaacaaaatacccatgggaggagatacagagacaaaatgtagag
cagagactgaaggaaaggccatctagagactgccccacctggggatccat
cccatatagagttaccaaacccagatactattgtggataccaacaagtac
ttgctgataggagcctgataaagctgtctcctgagaggctttgccagtac
ctcacaaatacagaggtgtatgctctcagccaaccattggactgagcaca
gggtcctcaatggaggagcagagaaggacccaaggagctgaaggtttgca
gctcataggagacacatatgaacatcagtaccccagagtcccaggactaa
acaacacaagagtaccatgaggaccatgcctcagctgcatatgtagcaag
atgcctgtcagtcatcatgggaggagggcacttgcctgtaagctcgagtc
cagttggggaatgcctaaggtccagaggcatgtgat
gaattccagggacaattaatgctctcaaatggcatattttgtcatctggg
actcgggagagcaaaggaggaaggctaaggtcagccaggtagtggccagc
ctggcttctggctgtgggtgctcaggcagagagtcccctttctgaaacct
caatgtctctgtcttcagaacagggacactgaaccacaagatgtctgtgc
ttccgtctgtgccgttctgcccatccctctgaagtgtggagataaacatc
cgactcatcggagattctggaaggttcttgaattgagcatgaaggacaaa
catgccaatcaattatgtagtgacccagcaaaaattgactgagaaaattt
gaaggaaagactttcacaatacccaagtagatgaatagcacagcaggtca
tttgttggctctccctgggtgtaacaagtgaaataggtgttaagtggttt
ggctccgagggtggcaggttagagatggtaggattttgagaattggagct
tatgaaggtgccactgggatgctgtcttgggaagaaattaagggagttct
tggggaacctcagtggttcccacaagaaggattttaatagctaaaacaaa
aagcacggagcctgtccctccttagcctctgtcttagggttttactgctg
tgaacagacaccatgaccaagacaactcttataagcacaaggtttaattg
gggctgatttacagcttcagagggtcagtccattatcatcaaggtgggag
catggcaacatccaggcagacctggtataggaagagctaagagttctaca
tcttgttctgaaggcaaatgggagaagactggcttccaggcagttaggac
aagggtatgaaagcccacactcacagtgacacacctatctccaacaaagg
tcacacctacctcaaagtcatccctcctaataggtgccactcccggggcc
caagcatactcaaaccattcacagcctctttagcgtcatgactagtactg
tgatcttcctcctgtctgtgcctccctcgttgtgggtgatgttttgccaa
gaggttaagcttgaccttctagagcttgattgctaacaaattgtattccc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_96185151_96186243
seq2: B6Ng01-284E17.g_66_1166 (reverse)

seq1  AGGGAATACATTTGTTTAGCAATC-AGCTCTAGAAGGTCAAAGCTT-ACC  48
      |||||||||| ||  ||||||||| |||||||||||||| |||||| |||
seq2  AGGGAATACAATTTGTTAGCAATCAAGCTCTAGAAGGTC-AAGCTTAACC  49

seq1  TCTTGGC-AAACATCA-CCACAACGGAGGAGGCACAGACAAGAGG-AGAT  95
      ||||||| |||||||| ||||||||  ||||||||||||| |||| ||||
seq2  TCTTGGCAAAACATCACCCACAACGAGGGAGGCACAGACAGGAGGAAGAT  99

seq1  CACAGTACTAGTCATGACGCTAAAGAGGCTGTG-ATGGTTTGAGTATGCT  144
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CACAGTACTAGTCATGACGCTAAAGAGGCTGTGAATGGTTTGAGTATGCT  149

seq1  TGGCCCCGGGGAGTGGCA-CTATTAGGAGGGGTGACCTTGGGGTAGGTGT  193
      ||| ||| |||||||||| |||||||||||| |||| ||| |||||||||
seq2  TGGGCCCCGGGAGTGGCACCTATTAGGAGGGATGACTTTGAGGTAGGTGT  199

seq1  GACC-TTGTTGGAG-TAGGTGTGTCACTGTGGGTGTGGGCTTTCATACCC  241
      |||| ||||||||| |||||||||||||||| ||||||||||||||||||
seq2  GACCTTTGTTGGAGATAGGTGTGTCACTGTGAGTGTGGGCTTTCATACCC  249

seq1  TTGTCCTAACTGCCTGGAAGCCAGTCTTCTCCCATTTGCCTTCAGAACAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTAACTGCCTGGAAGCCAGTCTTCTCCCATTTGCCTTCAGAACAA  299

seq1  GATGTAGAACTCTTAGCTCTTCCTATACCAGGTCTGCCTGGATGTTGCCA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGAACTCTTAGCTCTTCCTATACCAGGTCTGCCTGGATGTTGCCA  349

seq1  TGCTCCCACCTTGATGATAATGGACTGACCCTCTGAAGCTGTAAATCAGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCACCTTGATGATAATGGACTGACCCTCTGAAGCTGTAAATCAGC  399

seq1  CCCAATTAAACCTTGTGCTTATAAGAGTTGTCTTGGTCATGGTGTCTGTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTAAACCTTGTGCTTATAAGAGTTGTCTTGGTCATGGTGTCTGTT  449

seq1  CACAGCAGTAAAACCCTAAGACAGAGGCTAAGGAGGGACAGGCTCCGTGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGTAAAACCCTAAGACAGAGGCTAAGGAGGGACAGGCTCCGTGC  499

seq1  TTTTTGTTTTAGCTATTAAAATCCTTCTTGTGGGAACCACTGAGGTTCCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTAGCTATTAAAATCCTTCTTGTGGGAACCACTGAGGTTCCC  549

seq1  CAAGAACTCCCTTAATTTCTTCCCAAGACAGCATCCCAGTGGCACCTTCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTCCCTTAATTTCTTCCCAAGACAGCATCCCAGTGGCACCTTCA  599

seq1  TAAGCTCCAATTCTCAAAATCCTACCATCTCTAACCTGCCACCCTCGGAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCCAATTCTCAAAATCCTACCATCTCTAACCTGCCACCCTCGGAG  649

seq1  CCAAACCACTTAACACCTATTTCACTTGTTACACCCAGGGAGAGCCAACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCACTTAACACCTATTTCACTTGTTACACCCAGGGAGAGCCAACA  699

seq1  AATGACCTGCTGTGCTATTCATCTACTTGGGTATTGTGAAAGTCTTTCCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTGCTGTGCTATTCATCTACTTGGGTATTGTGAAAGTCTTTCCT  749

seq1  TCAAATTTTCTCAGTCAATTTTTGCTGGGTCACTACATAATTGATTGGCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTCTCAGTCAATTTTTGCTGGGTCACTACATAATTGATTGGCA  799

seq1  TGTTTGTCCTTCATGCTCAATTCAAGAACCTTCCAGAATCTCCGATGAGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCTTCATGCTCAATTCAAGAACCTTCCAGAATCTCCGATGAGT  849

seq1  CGGATGTTTATCTCCACACTTCAGAGGGATGGGCAGAACGGCACAGACGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGTTTATCTCCACACTTCAGAGGGATGGGCAGAACGGCACAGACGG  899

seq1  AAGCACAGACATCTTGTGGTTCAGTGTCCCTGTTCTGAAGACAGAGACAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGACATCTTGTGGTTCAGTGTCCCTGTTCTGAAGACAGAGACAT  949

seq1  TGAGGTTTCAGAAAGGGGACTCTCTGCCTGAGCACCCACAGCCAGAAGCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTCAGAAAGGGGACTCTCTGCCTGAGCACCCACAGCCAGAAGCC  999

seq1  AGGCTGGCCACTACCTGGCTGACCTTAGCCTTCCTCCTTTGCTCTCCCGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCACTACCTGGCTGACCTTAGCCTTCCTCCTTTGCTCTCCCGA  1049

seq1  GTCCCAGATGACAAAATATGCCATTTGAGAGCATTAATTGTCCCTGGAAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGATGACAAAATATGCCATTTGAGAGCATTAATTGTCCCTGGAAT  1099

seq1  TC  1093
      ||
seq2  TC  1101