BAC Information

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BAC

Clone NameB6Ng01-285K18
Chromosome13 (Build37)
Map Location 66,482,017 - 66,483,134
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915
Downstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285K18.b
ACCGA084062
length1,103
definitionB6Ng01-285K18.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgttcttatcatacatagctttcattttcgtggatcgaatacc
cccttgggggttcatagaatttgtgactattgtgaagggtgttgtttccc
taatttcattctgatccggtatatcctttgtgtacagtattacgccttag
cttcacccactatactgtgaccaaggtacataactaaataaactgttttg
attgtgtttctttagcattggtggcttttgctctgggagaatctcataga
tcacctatgaggacaattgaatccgttgagaattggaatctcatagattc
ctgatgctatgttatgaactgatttgaaaagagaaagaataatgaatgtt
gcagagtaagaagcgccgtgacagtgttgcatgtgatagcacgaaaccgc
tgcactttgggatagcttttctatgtactagggagataccaagaatacca
aataagatacacctacgggaacattctctgaaaatgacattgagattgtt
attgtgcctggtggtaaggctttgtaaatgtatgtgaaaagacagtttca
ttatgaaatgactgtgtttcattaagtgagaaaaatcactaatggaaata
tctcccacaagaacttcaccacagtgaggtcagtgatttctatggacata
taaatcactctagatgaagggtctcatcataaattttatcaaaatatgag
actaaagattatttcagttcaatatcacacacaaacatgcacataaaaca
catacacattgttctttacatcaggtgttgaaggtcagggtcatttttat
ctcaaaatactgtgttgggagccattaaggcaacgctattgtcctgatct
ctgaattgggcctctccccccaagaagaaaagagggtcaaaagcgggcca
ccgacacatggattccgagaactatgggatgttccagccctgggtcatca
ccgctctcctgaccacaccctgacacaacagttcctgcttccccatgtag
ctgtcaaagaagaattctattggccccccctccataagtactctctttgc
tgtatgcctaccctcactgataagtattctgtacttccccctttgctttg
tgc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66482017_66483134
seq2: B6Ng01-285K18.b_41_1143 (reverse)

seq1  GCAC-AAGCAAAGGGGGAAGTACAG-ATACTTATCAGTGGGAGGGGTAGG  48
      |||| |||||||||||||||||||| |||||||||||||    |||||||
seq2  GCACAAAGCAAAGGGGGAAGTACAGAATACTTATCAGTG---AGGGTAGG  47

seq1  GCAATACAAGCAAAAGGAGAAGTACTTATGGGAGGGGGGGCAATAGAAAT  98
         |||| ||||||  ||| |||||||||||  |||||| |||||| |||
seq2  --CATAC-AGCAAA--GAG-AGTACTTATGGAGGGGGGGCCAATAG-AAT  90

seq1  TCTTTCTTTTGACAGCTACATGGGGAAGCAGGAACTTGGTGGTGTCAGGG  148
      ||||   |||||||||||||||||||||||||||||  || |||||||||
seq2  TCTT--CTTTGACAGCTACATGGGGAAGCAGGAACT--GTTGTGTCAGGG  136

seq1  TGTGGTCAGGAGAGCGGTGATGACCCAGGGCTGGAACATCCCATAGTTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCAGGAGAGCGGTGATGACCCAGGGCTGGAACATCCCATAGTTCT  186

seq1  CGGAATCCATGTGTCGGTGGCCCGCTTTTGACCCTCTTTTCTTCTTGGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATCCATGTGTCGGTGGCCCGCTTTTGACCCTCTTTTCTTCTTGGGG  236

seq1  GGAGAGGCCCAATTCAGAGATCAGGACAATAGCGTTGCCTTAATGGCTCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGCCCAATTCAGAGATCAGGACAATAGCGTTGCCTTAATGGCTCC  286

seq1  CAACACAGTATTTTGAGATAAAAATGACCCTGACCTTCAACACCTGATGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGTATTTTGAGATAAAAATGACCCTGACCTTCAACACCTGATGT  336

seq1  AAAGAACAATGTGTATGTGTTTTATGTGCATGTTTGTGTGTGATATTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAATGTGTATGTGTTTTATGTGCATGTTTGTGTGTGATATTGAA  386

seq1  CTGAAATAATCTTTAGTCTCATATTTTGATAAAATTTATGATGAGACCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAATCTTTAGTCTCATATTTTGATAAAATTTATGATGAGACCCT  436

seq1  TCATCTAGAGTGATTTATATGTCCATAGAAATCACTGACCTCACTGTGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGAGTGATTTATATGTCCATAGAAATCACTGACCTCACTGTGGT  486

seq1  GAAGTTCTTGTGGGAGATATTTCCATTAGTGATTTTTCTCACTTAATGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTTGTGGGAGATATTTCCATTAGTGATTTTTCTCACTTAATGAA  536

seq1  ACACAGTCATTTCATAATGAAACTGTCTTTTCACATACATTTACAAAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCATTTCATAATGAAACTGTCTTTTCACATACATTTACAAAGCC  586

seq1  TTATTTTGCAGGCACAATCTGAATCTCAATGTCCTTTTCATAGAATGTTC  648
      |||     ||||||||||   |||||||||||| |||||| |||||||||
seq2  TTA-CCACCAGGCACAATAACAATCTCAATGTCATTTTCAGAGAATGTTC  635

seq1  CCGTCGTTGTATGTTATCTGGTATTCTTAACATCTCCCTAGTACATTGGA  698
      |||| | ||||| |||| ||||||||||   ||||||||||||||| | |
seq2  CCGTAGGTGTATCTTATTTGGTATTCTTGGTATCTCCCTAGTACATAGAA  685

seq1  AAGCTATCCCAAAGTGCAGCGCTTCTGTGCTATCACATGCATTACTGTCA  748
      ||||||||||||||||||||| ||  |||||||||||||||  |||||||
seq2  AAGCTATCCCAAAGTGCAGCGGTTTCGTGCTATCACATGCAACACTGTCA  735

seq1  CGGTGCTTCTTACTCTGCTAACATTCATTCTTCTTTCTCTTTTCAAATCA  798
      ||| |||||||||||||| |||||||||| ||||||||||||||||||||
seq2  CGGCGCTTCTTACTCTGC-AACATTCATTATTCTTTCTCTTTTCAAATCA  784

seq1  GTGCCTTTTATTGCATCAGGAATCTATGAGATTCCAAATCCCAACAGAGT  848
      || | |   || ||||||||||||||||||||||||| || |||| || |
seq2  GTTCATAACATAGCATCAGGAATCTATGAGATTCCAATTCTCAACGGATT  834

seq1  CAATTTACCAGTTAGGTGATGTCTTAGATTCTGTTGCTGTAAAAACCACC  898
      |||||  ||   |||||||| | | |||||||      | |||| |||||
seq2  CAATTGTCCTCATAGGTGATCTATGAGATTCTCCCAGAGCAAAAGCCACC  884

seq1  ATAGCCAAAGAAACATGTGAGAAAACTGTTTATTTACTTATGTACCTTGG  948
      |  || |||||||||      ||||| ||||||||| |||||||||||||
seq2  AATGCTAAAGAAACA-CAATCAAAACAGTTTATTTAGTTATGTACCTTGG  933

seq1  TCACAGTATATTGTGTGAAGCTAAGGCCTTATACTCTACACAAAGGATAA  998
      |||||||||| || ||||||||||||| | ||||| ||||||||||||| 
seq2  TCACAGTATAGTGGGTGAAGCTAAGGCGTAATACTGTACACAAAGGATAT  983

seq1  ACCGGATGAGAAAGAAATTAGGGAAACAACACCCTTCACAATAGTCACAA  1048
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ACCGGATCAGAATGAAATTAGGGAAACAACACCCTTCACAATAGTCACAA  1033

seq1  ATAATATGAAATACCTTGGTGTGATTCTATCTAAGAAAATGAAAGATATG  1098
      ||  ||||||   ||  || |  |||| ||| | ||||||||||| ||||
seq2  ATTCTATGAACCCCCAAGGGGGTATTCGATCCACGAAAATGAAAGCTATG  1083

seq1  TATGATAAGAACTTGAATTC  1118
      ||||||||||||  ||||||
seq2  TATGATAAGAACGAGAATTC  1103