BAC Information

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BAC

Clone NameB6Ng01-286K13
Chromosome13 (Build37)
Map Location 48,313,950 - 48,427,533
singlet/doubletdoublet
Overlap geneId4, LOC667351
Upstream geneIbrdc2, 4931429P17Rik
Downstream geneZfp169, A830005F24Rik, AW456874, Barx1, Phf2, EG667415, BC010304, C030044B11Rik, Wnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286K13.bB6Ng01-286K13.g
ACCGA084797GA084798
length1,147516
definitionB6Ng01-286K13.b B6Ng01-286K13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,426,377 - 48,427,533)(48,313,950 - 48,314,471)
sequence
gaattccaagtcctgatggggagctatagaaacttgggtgtccccagtcc
atttctggagttattcaagttattgttcccaataggcattcctttgacct
tggatggctgtaaacaacaacaacaacaacagaaaccagtgccatgactt
tgctacaatgtaatattgttctctcatgtttgtgttatgagttttggaca
tcattcctaggatgattctggaattgaaaacttagtctcatctatgtgaa
cttgcctgggcatgcaatatttttttaaaaaaaaaaatctattttggttg
gactcgtaaaagttgttactatgttagactgtcttctttactctgtttct
tggtggcccagaggaaaatagcttctgatatttaaataaaatgttcacaa
ggtgtttccaaatgtattatcccatttgacttccaaaatcagtgtgtgaa
ttaattctccttagaacaactcaagtcaaaatgagttaaatatgaataaa
agatagaacttgaacaaagccattcattcattcattcattcattcattca
tttaccagtgctcatcggcatgtattatgcgtcaggtatgatgttaaggg
ctgaaactataacctaagctgcaatttctagaactttactatctagagag
gatggcatccgcatactaaaaattaaataattctttaatttcaggtgtga
gatatgcagagaaggtaaagtatagtgggcaaagagtgcacacaggagac
tagaccaatcagctcccactcccttaagaaatcttacagaaaggctgggg
tctaaggaacaggacgtttgcttagtatgtacaaagctctcagtttggca
ctgcagaggaatggggagagggggagaaaaaggagcaggcatgaggagaa
gatgaggctgtgggggagaagggatgaggaaaaatggcgggagctttaga
ggagatgggcaccaagctaagctagcttgtgggagccacagcagcaaaca
gatcctcaagccattagaggagaccttgggtagacctcactgctgattcc
tctgtccactgcgggcactatggctgcaagcttcctgaaccttgattcaa
gttttatgcctggcagctatagcctcaatgtgcactcctctacgatc
ttcatgttgtctagatttaatagagttaacagagaggcagatatggggaa
tttttaaactacaagggaacgatacatattgaatttttgcattcatcaat
tgccatggtgattcacccgactgcaaaacttagcctaaacaccccacagc
tacggaataaatactcagagatgtgcttttagcttgtggaaattctcact
tgcctactgtcttttaagcttcagattctattgtctgtgtgacttaggat
cactgctgtcaatcacactgcacttagagcacttggtatgctgttagaga
gcagtgcggtagagagcagattgtcattttcaacacttgtacccattctg
tggtactaaatgcttgactcccaagttttgtggcatcccctggcatatct
tgcagtcatttttaaaaggaaaagggaggaaaaaaatataaggaaaaaag
gaagaaaaacagagagaggaaatggagaaagataggtgtaagatagagtg
ggagggatgggggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_48426377_48427533
seq2: B6Ng01-286K13.b_52_1198 (reverse)

seq1  GATCGTAGAGGAGTTTGCACATGGAGCC--TAGCTGCCAGGCATAAAAC-  47
      |||||||||||||  ||||||| ||| |  ||||||||||||||||||| 
seq2  GATCGTAGAGGAG--TGCACATTGAGGCTATAGCTGCCAGGCATAAAACT  48

seq1  TGGATCAAGGGTCTGGGAGCTCTGCAGCCATAGGTGCCCGCAGTGGACAA  97
      || ||||||| || || |||| |||||||||| ||||||||||||||| |
seq2  TGAATCAAGGTTCAGGAAGCT-TGCAGCCATA-GTGCCCGCAGTGGAC-A  95

seq1  GAGGAATCAGCAGTGAGGTTCCTACCAAAGTCTTCCTCTAATGGCTTGAG  147
      |||||||||||||||||||  ||||| |||   |||||||||||||||||
seq2  GAGGAATCAGCAGTGAGGT--CTACCCAAGGTCTCCTCTAATGGCTTGAG  143

seq1  GGATTCTGTTTGCTGCTGTGGCTCCCAACAGCCTTAGCCTAGCTTGGTTG  197
      |   |||||||||||||||||||||||  |||  |||| |||||||| ||
seq2  G--ATCTGTTTGCTGCTGTGGCTCCCACAAGC--TAGCTTAGCTTGG-TG  188

seq1  CCCATCTCTTCTAAAGCTCCCGCCATTTTTTCCTCATCCCTTCTCCCCCA  247
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  CCCATCTCCTCTAAAGCTCCCGCCA-TTTTTCCTCATCCCTTCTCCCCCA  237

seq1  CAGCCTCATCTTCTCCTCATGCCTGCTCCTTTTTCTCCCCCTCTCCCCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCATCTTCTCCTCATGCCTGCTCCTTTTTCTCCCCCTCTCCCCAT  287

seq1  TCCTCTGCAGTGCCAAACTGAGAGCTTTGTACATACTAAGCAAACGTCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCAGTGCCAAACTGAGAGCTTTGTACATACTAAGCAAACGTCCT  337

seq1  GTTCCTTAGACCCCAGCCTTTCTGTAAGATTTCTTAAGGGAGTGGGAGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTAGACCCCAGCCTTTCTGTAAGATTTCTTAAGGGAGTGGGAGCT  387

seq1  GATTGGTCTAGTCTCCTGTGTGCACTCTTTGCCCACTATACTTTACCTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTCTAGTCTCCTGTGTGCACTCTTTGCCCACTATACTTTACCTTC  437

seq1  TCTGCATATCTCACACCTGAAATTAAAGAATTATTTAATTTTTAGTATGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATATCTCACACCTGAAATTAAAGAATTATTTAATTTTTAGTATGC  487

seq1  GGATGCCATCCTCTCTAGATAGTAAAGTTCTAGAAATTGCAGCTTAGGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCATCCTCTCTAGATAGTAAAGTTCTAGAAATTGCAGCTTAGGTT  537

seq1  ATAGTTTCAGCCCTTAACATCATACCTGACGCATAATACATGCCGATGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCAGCCCTTAACATCATACCTGACGCATAATACATGCCGATGAG  587

seq1  CACTGGTAAATGAATGAATGAATGAATGAATGAATGAATGGCTTTGTTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTAAATGAATGAATGAATGAATGAATGAATGAATGGCTTTGTTCA  637

seq1  AGTTCTATCTTTTATTCATATTTAACTCATTTTGACTTGAGTTGTTCTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATCTTTTATTCATATTTAACTCATTTTGACTTGAGTTGTTCTAA  687

seq1  GGAGAATTAATTCACACACTGATTTTGGAAGTCAAATGGGATAATACATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTAATTCACACACTGATTTTGGAAGTCAAATGGGATAATACATT  737

seq1  TGGAAACACCTTGTGAACATTTTATTTAAATATCAGAAGCTATTTTCCTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACACCTTGTGAACATTTTATTTAAATATCAGAAGCTATTTTCCTC  787

seq1  TGGGCCACCAAGAAACAGAGTAAAGAAGACAGTCTAACATAGTAACAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACCAAGAAACAGAGTAAAGAAGACAGTCTAACATAGTAACAACT  837

seq1  TTTACGAGTCCAACCAAAATAGATTTTTTTTTTTAAAAAAATATTGCATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACGAGTCCAACCAAAATAGATTTTTTTTTTTAAAAAAATATTGCATG  887

seq1  CCCAGGCAAGTTCACATAGATGAGACTAAGTTTTCAATTCCAGAATCATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAAGTTCACATAGATGAGACTAAGTTTTCAATTCCAGAATCATC  937

seq1  CTAGGAATGATGTCCAAAACTCATAACACAAACATGAGAGAACAATATTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATGATGTCCAAAACTCATAACACAAACATGAGAGAACAATATTA  987

seq1  CATTGTAGCAAAGTCATGGCACTGGTTTCTGTTGTTGTTGTTGTTGTTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGCAAAGTCATGGCACTGGTTTCTGTTGTTGTTGTTGTTGTTTA  1037

seq1  CAGCCATCCAAGGTCAAAGGAATGCCTATTGGGAACAATAACTTGAATAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCCAAGGTCAAAGGAATGCCTATTGGGAACAATAACTTGAATAA  1087

seq1  CTCCAGAAATGGACTGGGGACACCCAAGTTTCTATAGCTCCCCATCAGGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAATGGACTGGGGACACCCAAGTTTCTATAGCTCCCCATCAGGA  1137

seq1  CTTGGAATTC  1157
      ||||||||||
seq2  CTTGGAATTC  1147

seq1: chr13_48313950_48314471
seq2: B6Ng01-286K13.g_71_592

seq1  GAATTCTTCATGTTGTCTAGATTTAATAGAGTTAACAGAGAGGCAGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATGTTGTCTAGATTTAATAGAGTTAACAGAGAGGCAGATAT  50

seq1  GGGGAATTTTTAAACTACAAGGGAACGATACATATTGAATTTTTGCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATTTTTAAACTACAAGGGAACGATACATATTGAATTTTTGCATTC  100

seq1  ATCAATTGCCATGGTGATTCACCCGACTGCAAAACTTAGCCTAAACACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGCCATGGTGATTCACCCGACTGCAAAACTTAGCCTAAACACCC  150

seq1  CACAGCTACGGAATAAATACTCAGAGATGTGCTTTTAGCTTGTGGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTACGGAATAAATACTCAGAGATGTGCTTTTAGCTTGTGGAAATT  200

seq1  CTCACTTGCCTACTGTCTTTTAAGCTTCAGATTCTATTGTCTGTGTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGCCTACTGTCTTTTAAGCTTCAGATTCTATTGTCTGTGTGACT  250

seq1  TAGGATCACTGCTGTCAATCACACTGCACTTAGAGCACTTGGTATGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCACTGCTGTCAATCACACTGCACTTAGAGCACTTGGTATGCTGT  300

seq1  TAGAGAGCAGTGCGGTAGAGAGCAGATTGTCATTTTCAACACTTGTACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCAGTGCGGTAGAGAGCAGATTGTCATTTTCAACACTTGTACCC  350

seq1  ATTCTGTGGTACTAAATGCTTGACTCCCAAGTTTTGTGGCATCCCCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGGTACTAAATGCTTGACTCCCAAGTTTTGTGGCATCCCCTGGC  400

seq1  ATATCTTGCAGTCATTTTTAAAAGGAAAAGGGAGGAAAAAAATATAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTGCAGTCATTTTTAAAAGGAAAAGGGAGGAAAAAAATATAAGGA  450

seq1  AAAAAGGAAGAAAAACAGAGAGAGGAAATGGAGAAAGATAGGTGTAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAGAAAAACAGAGAGAGGAAATGGAGAAAGATAGGTGTAAGAT  500

seq1  AGAGTGGGAGGGATGGGGGATG  522
      ||||||||||||||||||||||
seq2  AGAGTGGGAGGGATGGGGGATG  522