BAC Information

Click to search

BAC

Clone NameB6Ng01-287D07
Chromosome13 (Build37)
Map Location 69,890,270 - 69,891,331
singlet/doubletsinglet
Overlap gene3110006E14Rik
Upstream geneAdcy2, LOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260
Downstream gene4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473, Adamts16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287D07.bB6Ng01-287D07.g
ACCGA085193GA085194
length4931,059
definitionB6Ng01-287D07.b B6Ng01-287D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgatctttccaagacttttatcatgaataggtgttggattttgtcaaat
gctttctccacatctaacaagatgatcaaatggtttttgtctttgagttt
gtttatatactggattatgttggtggatttccatatattgaaccatccct
gcatccctgggatgaaacctacttgttcaggatagatgattgttttgacg
tgttgttggattccgttagcctagcaaacagagaagtggatgatcacagt
cagctattggatggatcacatggcccccaatggaggagctagagaaatta
cccaaggagctaaagggaactgcaaccctataggtggaccaacaatatca
actaaccagtaccccggagctcttgtctctagctgcatatgtatcaaaag
atggcctagtcggccatcactgcaaagagaggcccattggacttgcaaac
tttatatgccccagtacaggggaaccccagggccaaaaagggg
gaattctgctgacccctttttacggtacgagtccatatctaggtcatggc
cctggagttgccacggagcactcactgtctgtgtggctgatgaattcctt
tcatggctactgtggcaagttaggagcatcacagtccctcttttcatttg
tgacctccagatgtcccgtggtctggtgcacaggtgggtttgcatactct
gagaatacccagtgtctgtcccgtgtgctgggctcagcttgcgagcagag
aagaaggagtggaggagatcttgtccccacagaatgtaggctttccaagg
cagctgcgtgaggatatgagtcagacgttcttctctgaggaagacatggt
ttcatcctaaagagacttccagaagaggagtctcatccctcctgtccctt
tcatctttgcttcaggcaaaggcagttgctctccggaagtgtgggatgac
agctgacattgtgtcaagatagtgtctctatcccatgtcacctccaatgc
taggtctaaatataggccctaccgtagtattctgagaaaacaaagttgat
tctgcttcctggttgctgagggtggtgagtggaatcccataatgagccga
agcaaggaccgtgcatcgcagttatattaggtattcccggagtgtcaaga
gcgggcgagaatctttgctatttattttgctgtcactatgtctacagcta
caatgtcagctttgaagaatacaatcaagaataatctctctaactcagct
aggggtttggtactagacgctgatttttagaattgtttaaaacagaacag
ttgtttacttgtaccggaaggctcagagtttaactgtgtaactttgggtt
ttaaaagaaaaaaaaagtgcacatatgtcatttaggagacaccccaatca
atacatggaggatttccatcattctagaaacttctcctatctcatttgct
agtcaaatccataccacccccttcacagaggcacctgttttagttctatc
acataggtttggtttatatctgtctgttctgtctgttgtcatctggtccc
cttcctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69890270_69891331
seq2: B6Ng01-287D07.g_69_1127

seq1  GAATTCTGCTGACCCCTTTTTACGGTACGAGTCCATATCTAGGTCATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGACCCCTTTTTACGGTACGAGTCCATATCTAGGTCATGGC  50

seq1  CCTGGAGTTGCCACGGAGCACTCACTGTCTGTGTGGCTGATGAATTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTTGCCACGGAGCACTCACTGTCTGTGTGGCTGATGAATTCCTT  100

seq1  TCATGGCTACTGTGGCAAGTTAGGAGCATCACAGTCCCTCTTTTCATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTACTGTGGCAAGTTAGGAGCATCACAGTCCCTCTTTTCATTTG  150

seq1  TGACCTCCAGATGTCCCGTGGTCTGGTGCACAGGTGGGTTTGCATACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCAGATGTCCCGTGGTCTGGTGCACAGGTGGGTTTGCATACTCT  200

seq1  GAGAATACCCAGTGTCTGTCCCGTGTGCTGGGCTCAGCTTGCGAGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATACCCAGTGTCTGTCCCGTGTGCTGGGCTCAGCTTGCGAGCAGAG  250

seq1  AAGAAGGAGTGGAGGAGATCTTGTCCCCACAGAATGTAGGCTTTCCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAGTGGAGGAGATCTTGTCCCCACAGAATGTAGGCTTTCCAAGG  300

seq1  CAGCTGCGTGAGGATATGAGTCAGACGTTCTTCTCTGAGGAAGACATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCGTGAGGATATGAGTCAGACGTTCTTCTCTGAGGAAGACATGGT  350

seq1  TTCATCCTAAAGAGACTTCCAGAAGAGGAGTCTCATCCCTCCTGTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTAAAGAGACTTCCAGAAGAGGAGTCTCATCCCTCCTGTCCCTT  400

seq1  TCATCTTTGCTTCAGGCAAAGGCAGTTGCTCTCCGGAAGTGTGGGATGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTGCTTCAGGCAAAGGCAGTTGCTCTCCGGAAGTGTGGGATGAC  450

seq1  AGCTGACATTGTGTCAAGATAGTGTCTCTATCCCATGTCACCTCCAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACATTGTGTCAAGATAGTGTCTCTATCCCATGTCACCTCCAATGC  500

seq1  TAGGTCTAAATATAGGCCCTACCGTAGTATTCTGAGAAAACAAAGTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTAAATATAGGCCCTACCGTAGTATTCTGAGAAAACAAAGTTGAT  550

seq1  TCTGCTTCCTGGTTGCTGAGGGTGGTGAGTGGAATCCCATAATGAGCCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCTGGTTGCTGAGGGTGGTGAGTGGAATCCCATAATGAGCCGA  600

seq1  AGCAAGGACCGTGCATCGCAGTTATATTAGGTATTCCCGGAGTGTCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGACCGTGCATCGCAGTTATATTAGGTATTCCCGGAGTGTCAAGA  650

seq1  GCGGGCGAGAATCTTTGCTATTTATTTTGCTGTCACTATGTCTACAGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCGAGAATCTTTGCTATTTATTTTGCTGTCACTATGTCTACAGCTA  700

seq1  CAATGTCAGCTTTGAAGAATACAATCAAGAATAATCTCTCTAACTCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCAGCTTTGAAGAATACAATCAAGAATAATCTCTCTAACTCAGCT  750

seq1  AGGGGTTTGGTACTAGACGCTGATTTTTAGAATTGTTTAAAACAGAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGGTACTAGACGCTGATTTTTAGAATTGTTTAAAACAGAACAG  800

seq1  TTGTTTACTTGTACCGGAAGGCTCAGAGTTTAACTGTGTAACTTTGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTACTTGTACCGGAAGGCTCAGAGTTTAACTGTGTAACTTTGGGTT  850

seq1  TTAAAAGAAAAAAAAAGTGCACATATGTCATTTAGGAGACACCCCAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAAAAAAAAAGTGCACATATGTCATTTAGGAGACACCCCAATCA  900

seq1  ATACATGGAGGATTTCCATCATTCTAGAAACTTCTCCTATCTCATTTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGAGGATTTCCATCATTCTAGAAACTTCTCCTATCTCATTTGCT  950

seq1  AGTCAAATCCATACCA-CCCCTTCACCAGAGGCACCCTGTTTTAGTTTCT  999
      |||||||||||||||| |||||||| |||||||| |||||||||| ||||
seq2  AGTCAAATCCATACCACCCCCTTCA-CAGAGGCA-CCTGTTTTAG-TTCT  997

seq1  ATCACCATAGTTTTGTTTTATATTCTGTCTG-TCTGTCTGTTTGTCAATC  1048
      |||| ||||| |||| |||||| |||||||| |||||||| ||||| |||
seq2  ATCA-CATAGGTTTGGTTTATA-TCTGTCTGTTCTGTCTG-TTGTC-ATC  1043

seq1  TG--TCCCTTCCTCCC  1062
      ||   |||||||||||
seq2  TGGTCCCCTTCCTCCC  1059