BAC Information

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BAC

Clone NameB6Ng01-288A02
Chromosome13 (Build37)
Map Location 106,925,905 - 107,125,106
singlet/doubletdoublet
Overlap geneOlfr717-ps1
Upstream geneRnf180, Htr1a, EG668025
Downstream geneLOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322, LOC100040350, LOC100040366
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288A02.bB6Ng01-288A02.g
ACCGA085780GA085781
length1,071221
definitionB6Ng01-288A02.b B6Ng01-288A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,925,905 - 106,926,977)(107,124,886 - 107,125,106)
sequence
gaattctcttcttggtctctgcttctcctttctctccctcccattttctc
ccaggtttgcagtccccctcacaccgacgaataactgagtcctattggac
aggacacatcccctttgactttctccattgtgttctcttaatactgaagt
tgtctttttcataccctgttgttttcttttacatcagaacatcacaaggg
tgatatttttcaaagctgagaaagaattcatggaaggaatgaaactaagt
aaatggtagcaatatattcaaatgcatactttgaaatatttaaagataag
aacatgccaacatgtagccctagaaagatacttcttttattttatctaga
aatgagtattcagacttttcactggaatttatgtcttcatctacatttcc
attgaatgaactaactagtccctgcatgatggaattttacctttatatct
cagatatgtaaacattctacaggtgctttaaaaatgttccttttacatat
tccatagtactaaattataaattatttgtattttccatgtgttctatgtg
tgttagtatagtattctattagaataacttttttcagtaatcatataaag
tacaatgaagtgaaaatgccttaacctggtcagatgcagaatttctcagt
ttcaatgtaattccaggaaataaacacactcttcataagtgtcatataca
taatctgtcactgtcaatggtcaatggacaacattatttggactgtccat
aggtgaacttcattcaccacaaaatatagcatttctgaaaattccttttg
agttttcttttctatgaacaaaagcagtcaacaatttctatcatgctgat
tttaagacattgcttgctgcggcttgtaaccatttaaaaacaacaaacaa
acaaacaaacaacaaaaccaaaaaacaacctttttatgcaatttcacaga
agacacagaataaagaacggtttttaaacacagtctaaaactttttaact
tctcataaccttgaacagttttcatctcaaatctttaccataatacttat
ttctcaggaggctatggcact
gaattctcagaatattaatcacattatttaaaaaataataagatggagaa
atgtttgagaaatacaaaagaaacagttcagtggatagcttgtagcagaa
atagatgtacacctcaattatagccctttctatagtctcttcacttttct
gatgagtgctttcaagagatactgatgagcctttgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_106925905_106926977
seq2: B6Ng01-288A02.b_47_1117

seq1  GAATTCTCTTCTTGGTCTCTGCTTCTCCTTTCTCTCCCTCCCATTTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTTGGTCTCTGCTTCTCCTTTCTCTCCCTCCCATTTTCTC  50

seq1  CCAGGTTTGCAGTCCCCCTCACACCGACGAATAACTGAGTCCTATTGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTGCAGTCCCCCTCACACCGACGAATAACTGAGTCCTATTGGAC  100

seq1  AGGACACATCCCCTTTGACTTTCTCCATTGTGTTCTCTTAATACTGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACATCCCCTTTGACTTTCTCCATTGTGTTCTCTTAATACTGAAGT  150

seq1  TGTCTTTTTCATACCCTGTTGTTTTCTTTTACATCAGAACATCACAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTCATACCCTGTTGTTTTCTTTTACATCAGAACATCACAAGGG  200

seq1  TGATATTTTTCAAAGCTGAGAAAGAATTCATGGAAGGAATGAAACTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTTTCAAAGCTGAGAAAGAATTCATGGAAGGAATGAAACTAAGT  250

seq1  AAATGGTAGCAATATATTCAAATGCATACTTTGAAATATTTAAAGATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTAGCAATATATTCAAATGCATACTTTGAAATATTTAAAGATAAG  300

seq1  AACATGCCAACATGTAGCCCTAGAAAGATACTTCTTTTATTTTATCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCCAACATGTAGCCCTAGAAAGATACTTCTTTTATTTTATCTAGA  350

seq1  AATGAGTATTCAGACTTTTCACTGGAATTTATGTCTTCATCTACATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTATTCAGACTTTTCACTGGAATTTATGTCTTCATCTACATTTCC  400

seq1  ATTGAATGAACTAACTAGTCCCTGCATGATGGAATTTTACCTTTATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGAACTAACTAGTCCCTGCATGATGGAATTTTACCTTTATATCT  450

seq1  CAGATATGTAAACATTCTACAGGTGCTTTAAAAATGTTCCTTTTACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGTAAACATTCTACAGGTGCTTTAAAAATGTTCCTTTTACATAT  500

seq1  TCCATAGTACTAAATTATAAATTATTTGTATTTTCCATGTGTTCTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGTACTAAATTATAAATTATTTGTATTTTCCATGTGTTCTATGTG  550

seq1  TGTTAGTATAGTATTCTATTAGAATAACTTTTTTCAGTAATCATATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTATAGTATTCTATTAGAATAACTTTTTTCAGTAATCATATAAAG  600

seq1  TACAATGAAGTGAAAATGCCTTAACCTGGTCAGATGCAGAATTTCTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGAAGTGAAAATGCCTTAACCTGGTCAGATGCAGAATTTCTCAGT  650

seq1  TTCAATGTAATTCCAGGAAATAAACACACTCTTCATAAGTGTCATATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTAATTCCAGGAAATAAACACACTCTTCATAAGTGTCATATACA  700

seq1  TAATCTGTCACTGTCAATGGTCAATGGACAACATTATTTGGACTGTCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGTCACTGTCAATGGTCAATGGACAACATTATTTGGACTGTCCAT  750

seq1  AGGTGAACTTCATTCACCACAAAATATAGCATTTCTGAAAATTCCTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAACTTCATTCACCACAAAATATAGCATTTCTGAAAATTCCTTTTG  800

seq1  AGTTTTCTTTTCTATGAACAAAAGCAGTCAACAATTTCTATCATGCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTTTCTATGAACAAAAGCAGTCAACAATTTCTATCATGCTGAT  850

seq1  TTTAAGACATTGCTTGCTGCGG-TTGTAACCATTAAAAACAAACAAACAA  899
      |||||||||||||||||||||| ||||||||||| ||||  |||||||||
seq2  TTTAAGACATTGCTTGCTGCGGCTTGTAACCATTTAAAAACAACAAACAA  900

seq1  ACAAACAAACAAACAAAACCAAAAAACAACC-TTTTATGCAATTTCACAG  948
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  ACAAACAAAC-AACAAAACCAAAAAACAACCTTTTTATGCAATTTCACAG  949

seq1  AAGACACAGAATAAAGAACGGTTTTTAAACACAGTCTAAAACTTTTTAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAGAATAAAGAACGGTTTTTAAACACAGTCTAAAACTTTTTAAC  999

seq1  TTCTCCATAACCTTGAACAGGTTTTCATCTCAAATCTTTACCAT-ATACT  1047
      |||| |||||||||||||| |||||||||||||||||||||||| |||||
seq2  TTCT-CATAACCTTGAACA-GTTTTCATCTCAAATCTTTACCATAATACT  1047

seq1  TATTTCCTCCAAGA-GCTATGGGCACT  1073
      ||||||   || || ||||| ||||||
seq2  TATTTC--TCAGGAGGCTAT-GGCACT  1071

seq1: chr13_107124886_107125106
seq2: B6Ng01-288A02.g_62_282 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACAAAGGCTCATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAAAGGCTCATCAG  50

seq1  TATCTCTTGAAAGCACTCATCAGAAAAGTGAAGAGACTATAGAAAGGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTGAAAGCACTCATCAGAAAAGTGAAGAGACTATAGAAAGGGCT  100

seq1  ATAATTGAGGTGTACATCTATTTCTGCTACAAGCTATCCACTGAACTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGAGGTGTACATCTATTTCTGCTACAAGCTATCCACTGAACTGTT  150

seq1  TCTTTTGTATTTCTCAAACATTTCTCCATCTTATTATTTTTTAAATAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTATTTCTCAAACATTTCTCCATCTTATTATTTTTTAAATAATG  200

seq1  TGATTAATATTCTGAGAATTC  221
      |||||||||||||||||||||
seq2  TGATTAATATTCTGAGAATTC  221