BAC Information

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BAC

Clone NameB6Ng01-294K13
Chromosome13 (Build37)
Map Location 117,456,906 - 117,457,921
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041045, EG623174, Isl1, EG668276, Gm280
Downstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807, Hcn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294K13.bB6Ng01-294K13.g
ACCGA090730GA090731
length1,2061,022
definitionB6Ng01-294K13.b B6Ng01-294K13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttttgaggtctgtaaaaattgtgttggaattttgatggcct
ttgcattgaatctgtagattgcttttgatacaatggccatttttactata
ctaatgctaccaacccatgagcttgagagatctttccatcttctgatatt
ttcttcagattcttcggagacttaaagctcttctcatacaggtcattcac
ttgcttggttagagttatgccaatatactctatattatttatggctattg
caaaaggtgccgtattcctagttttgttctcagcccatttattgttgatg
aataggtgttctactgatttctttgagttgattttgtatccagccactat
tctgaaagtgttttcagttataggagttctccagtagaattttgggtgtc
acttatgtatactatcgtatcatctgtgaaaagtgactctttgatttctt
cttccctatgttgtatccccttggcctcctttagttactttattgctcca
gctagaacttcaagtactatgttgaatagataaggagagagttggcagcc
ttgccttgttcctgattttagtggaattgctttgcgtttctcttcattta
atttgatgttggctattggcttgatggatattggctttattgcacttaga
tattgtgcacatgccttgtatccgttgtttctccagacttttaacatgaa
ggggtgttggattatgtctaaggattttcagcatctaatgagatgatcat
atgactttttctctcagtttgtatataggaagtattagttgatgaatttt
catatattgagccattcctgtggtgaatgatgtttcacatgtgttcttgg
atttgctttgtgagtattgtattgaatagttttgcatcaatatccataag
gaaataggtctaaagttctctttctttgtttagtctttgtgtgctttgta
ttgtatgactgtggcctcatagaatgagtttagcaatgttttcttctgtg
gctattttgtggactgttttgagaagtatagtacctagctcctcctatga
agttctggtagatttggtgctaaatcatctcgggccctggatctttttgg
tgggagactttatgactgctctataactaggcttagaacattcatagtaa
ccggaactgatactggagtatcatctaggcagaaccctttgtatacgagg
tatgca
gaattctgtgggatatttctcagaataaaatcctgtgggacactatgcaa
aacaaaaattaattgatataggaaagagtgaggtgggtagtggtgggaga
gaaataagagaagatataggtataaatttagctttgatttcttcagaaga
atggatgagatgagctatgtatccaagatgtgtgaatacatggcttgggc
tgagctcatagtgtttctttctcctgttctagctatctctagacctaagt
ttggaaggttctagcctcagtacaatctaatcttccaagctgactgattc
aatccagcttctttcagatcctgacaaaattgctctgcttggcctcacac
taactttcttaatatgttctaattttctcactctctagcttgttctatct
tcacctgtgccgagcttgttctctccgcaattggtctctataaaactgtc
ctggtaacagctctctcctcttcagtagcctctttcctttgctgttctct
tatgagttgggcatatcctacctctgactcattctgtcaaagtcttttct
ctgattcatcatcttgtctgtccctcatttaaaggtcactttcaaacatg
gttgcttcatttctacaaaccaatcttaccttcattgttagggggttaaa
gacatgtgttaagggcatgcctgtactgcagccagatcatactgtaatct
tgggtgtgtctgcattccagcctgaccataaaagacctcaaaggactttt
ggatgtaatcccttgccagagcagccgtgttactggatcaaaattccttt
gcaatagggaattaaccagagtgcaacatacatgtagatgaatgggtcag
aaggtttaaaatattgacaaatccttttaaaatgattaagttgcataata
taagaagttattcaaaagtttaaagtaaagcgtgtaatgactgcaggtga
caagattggcgagagacttctattatacatgaggtattttccaactttta
gaaaaaatcacctctcggagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117456906_117457921
seq2: B6Ng01-294K13.g_67_1088 (reverse)

seq1  TACTCC-AGAGGTGA-TATTTCT-AAAGTTGAAAAATA-CTCATGTATAA  46
      |||||| |||||||| | ||||| ||||||| |||||| |||||||||||
seq2  TACTCCGAGAGGTGATTTTTTCTAAAAGTTGGAAAATACCTCATGTATAA  50

seq1  TTAGAAG--TCTCACCATTC-TCTCACCTGCAGTCATTACACGCTTTTAC  93
       ||||||  |||| ||| || | ||||||||||||||||||||| |||||
seq2  -TAGAAGTCTCTCGCCAATCTTGTCACCTGCAGTCATTACACGC-TTTAC  98

seq1  TTTAAAACTTTTGAAATAACTCTTTAAAATTATGCAACTTAATCATTTTT  143
      ||| ||||||||| ||||||| | | | ||||||||||||||||||||| 
seq2  TTT-AAACTTTTG-AATAACT-TCTTATATTATGCAACTTAATCATTTT-  144

seq1  AAAAAGGATTTGTCAATATTTTTAAACTTCTGACCATTTCATCTACATGT  193
       ||||||||||||||||||||| || |||||||||  |||||||||||||
seq2  -AAAAGGATTTGTCAATATTTTAAACCTTCTGACCCATTCATCTACATGT  193

seq1  ATGTTGCACTCTGGTTATTTCCCTATTGCAAAGGAATTTTGATCCAGTAA  243
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGTTGCACTCTGGTTAATTCCCTATTGCAAAGGAATTTTGATCCAGTAA  243

seq1  CACGGCTGCTCTGGCAAGGGATTACATCC-AAAGTCCTTTGAGGTC-TTT  291
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  CACGGCTGCTCTGGCAAGGGATTACATCCAAAAGTCCTTTGAGGTCTTTT  293

seq1  ATTGTCAGGCTGGAATGCAGACACACCCAAGATTACAGTATGATCTGGCT  341
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAGGCTGGAATGCAGACACACCCAAGATTACAGTATGATCTGGCT  343

seq1  GCAGTACAGGCATGCCCTTAACACATGTCTTTAA-CCCCTAACAATGAAG  390
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCAGTACAGGCATGCCCTTAACACATGTCTTTAACCCCCTAACAATGAAG  393

seq1  GTAAGATTGGTTTGTAG-AATGAAGCAACCATGTTTGAAAGTGACCTTTA  439
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTAAGATTGGTTTGTAGAAATGAAGCAACCATGTTTGAAAGTGACCTTTA  443

seq1  AATGAGGGACAGACAAGATGATGAATCAGAG-AAAGAC-TTGACAGAATG  487
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  AATGAGGGACAGACAAGATGATGAATCAGAGAAAAGACTTTGACAGAATG  493

seq1  AGTCAGAGGTAGGATATGCCCAACTCATAAGAGAACAGCAAAGGAAAGAG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGGTAGGATATGCCCAACTCATAAGAGAACAGCAAAGGAAAGAG  543

seq1  GCTACTGAAGAGGAGAGAGCTGTTACCAGGACAGTTTTATAGAGACCAAT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGAAGAGGAGAGAGCTGTTACCAGGACAGTTTTATAGAGACCAAT  593

seq1  TGCGGAGAGAACAAGCTCGGCACAGGTGAAGATAGAACAAGCTAGAGAGT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGAGAGAACAAGCTCGGCACAGGTGAAGATAGAACAAGCTAGAGAGT  643

seq1  GAGAAAATTAGAACATATTAAGAAAGTTAGTGTGAGGCCAAGCAGAGCAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATTAGAACATATTAAGAAAGTTAGTGTGAGGCCAAGCAGAGCAA  693

seq1  TTTTGTCAGGATCTGAAAGAAGCTGGATTGAATCAGTCAGCTTGGAAGAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAGGATCTGAAAGAAGCTGGATTGAATCAGTCAGCTTGGAAGAT  743

seq1  TAGATTGTACTGAGGCTAGAACCTTCCAAACTTAGGTCTAGAGATAGCTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTACTGAGGCTAGAACCTTCCAAACTTAGGTCTAGAGATAGCTA  793

seq1  GAACAGGAGAAAGAAACACTATGAGCTCAGCCCAAGCCATGTATTCACAC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGAGAAAGAAACACTATGAGCTCAGCCCAAGCCATGTATTCACAC  843

seq1  ATCTTGGATACATAGCTCATCTCATCCATTCTTCTGAAGAAATCAAAGCT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGATACATAGCTCATCTCATCCATTCTTCTGAAGAAATCAAAGCT  893

seq1  AAATTTATACCTATATCTTCTCTTATTTCTCTCCCACCACTACCCACCTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATACCTATATCTTCTCTTATTTCTCTCCCACCACTACCCACCTC  943

seq1  ACTCTTTCCTATATCAATTAATTTTTGTTTTGCATAGTGTCCCACAGGAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCTATATCAATTAATTTTTGTTTTGCATAGTGTCCCACAGGAT  993

seq1  TTTATTCTGAGAAATATCCCACAGAATTC  1016
      |||||||||||||||||||||||||||||
seq2  TTTATTCTGAGAAATATCCCACAGAATTC  1022