BAC Information

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BAC

Clone NameB6Ng01-295B23
Chromosome13 (Build37)
Map Location 66,797,769 - 66,933,261
singlet/doubletdoublet
Overlap geneVmn2r-ps106, LOC666027, LOC100042492, LOC100041947
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d
Downstream geneEG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295B23.bB6Ng01-295B23.g
ACCGA091075GA091076
length1,1081,088
definitionB6Ng01-295B23.b B6Ng01-295B23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,932,157 - 66,933,261)(66,797,769 - 66,798,849)
sequence
gaattcaactatttttgataacaagagtaaatggtggaaaattcttctta
gttgtcttgtcattatttgcttaccaagttttggaattttatttaaatct
ttaaatgatagcagtgacttatgaaacatgtatttacctcaactttgtaa
cagtttttgtgttgaaccatattccctgctatataatcgtgtaaatctgt
tttttattcactaatgatcactgcagaaatgactagaaatgagattgttc
acatggataattaggctatattttgcaaatctcccaaacttttcctaata
tcttaaaattaatggagtacctaaatgcttcccaaatttgatcactttgt
ttcttggtgcatgggaggtcagcaatatagtcaaaatggatatgagtatg
tgagagccttgattgatgtgtaatattgccaatgatgaactcaggttgtt
tttagcacaagtttctcttttttatgctggtattctcactgccacatttt
tggaaacctgtatcacaccttaaatctatctataaataatagttttctaa
ttctaaattatatatatatcagggtcttgatcagccaccatcagagatct
ttccttctgtaatagatagaaacaaatacaaatacccttagccagtcagt
tttgagaatgtgaaagactttggaagacacattcataaatgggctgtctt
cataaaatcccttttgtcaggacttaggaaatatggtggaagtataggta
gaagtatatcagtgccagaggggattgagaaatcccaccatggaaaacag
gacttctaaaacatgaaagatagatgcacatatgaagttacagagaatgt
gggcagcatgcacagggcctgcatggttctgttcaaaatggggtctcaat
actgagaggggaatggaactatatcaccatttcaattcagttgatagtca
tttacaaaaaaccatattaattgtttttatgatataaaatgctgtatgaa
atgaaagaggacaccatacctgggcatctatcccatgaagttcttgagat
gggcatctaatatgtagaaatcatttttattagaaacgtagtgggtcaca
agatgaat
gaattccaggacagccagggctacataaagaaaccctgtctggaaaaacc
aaaaataaataaataaacaaataaatccatatatcaaccagtaacccaag
gtataaaactcccacccaaacagctcaaaccaagaaaccaaatcacctca
aacccagaggcctagacaccagcaaatgaatataatgaataatagccagg
aaaatatatcaccatcaaatccaagctatcctatcacagcaggtcctgag
aaattgaaacatgcaatagatacagtggaaaaatggttgtttgcggtaac
ggagaggagtgaaaacatgggggaagggatagctgtgcacaggaagacct
gcagacaggcacacagacagagagcagagagagacagccacaagaatagg
gaaatagaatgggggttgggggagagcatgtgcagagaacagagacaggg
aacaaagtacagagctgctctagctggtggtccatgtatataaagcacac
ctgacaacagcagcaggtgatggagacaggtaacgacttaagcatttgct
aagtccctaagagcaggccattgaatttgctgtacactgtcaaccacgga
ggcaaggtacacccttggtccaggaagggaagagagactctcaggcatta
gagatgaatagaaaaaaatgataaaatggtcaaaaaatatgaattccaaa
tgttctgggcactaaataatcaccatttcctgcaacatatgagaaggttg
aaaagtagaaattattgggaatagaagaagaatatcaagctcaaggtcta
ggaaaataatttttcaggtgaaattattgattgaaaaattttcctaacct
aaagaaatacctatccaaggtacaaagaagcatcaaaatagcaatagatt
ggacccaaaaagtcctttttgccacttacagtccaatctcttaaacatat
aaagcaaagaaatatgaaaaactgccaacagaaggatataaaaactatta
aaacaaaaccagttactttttggagctgacctattacttcctatctgtct
tctccatggtctactagtaaaacatcagtgttgggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66932157_66933261
seq2: B6Ng01-295B23.b_47_1154 (reverse)

seq1  ATTCATCTTGTGA-CCACTACGTTTCTA--TAAAATGATTTCTACATATA  47
      ||||||||||||| ||||||||||||||   |||||||||||||||||| 
seq2  ATTCATCTTGTGACCCACTACGTTTCTAATAAAAATGATTTCTACATATT  50

seq1  GGATGCCATCCTCAAGAACTTCATGGGATAGATGCCCAGGTATGGTGTCC  97
       ||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCATCTCAAGAACTTCATGGGATAGATGCCCAGGTATGGTGTCC  100

seq1  TCTTTCATTTCATACAGCATTTTATATCATAAAAACAATTAATATTGGTT  147
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTTTCATTTCATACAGCATTTTATATCATAAAAACAATTAATA-TGGTT  149

seq1  TTTTGTAAATGACTATCAACTGAATTGAAATGGTGATATAGTTCCATTCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAATGACTATCAACTGAATTGAAATGGTGATATAGTTCCATTCC  199

seq1  CCTCTCAGTATTGAGACCCCATTTTGAACAGAACCATGCAGGCCCTGTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGTATTGAGACCCCATTTTGAACAGAACCATGCAGGCCCTGTGC  249

seq1  ATGCTG-CCACATTCTCTGTAACTTCATATGTGCATCTATCTTTCATGTT  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCCACATTCTCTGTAACTTCATATGTGCATCTATCTTTCATGTT  299

seq1  TTAGAAGTCCTGTTTTCCATGGTGGGATTTCTCAATCCCCTCTGGCACTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTCCTGTTTTCCATGGTGGGATTTCTCAATCCCCTCTGGCACTG  349

seq1  ATATACTTCTACCTATACTTCCACCATATTTCCTAAGTCCTGACAAAAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTCTACCTATACTTCCACCATATTTCCTAAGTCCTGACAAAAGG  399

seq1  GATTTTATGAAGACAGCCCATTTATGAATGTGTCTTCCAAAGTCTTTCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATGAAGACAGCCCATTTATGAATGTGTCTTCCAAAGTCTTTCAC  449

seq1  ATTCTCAAAACTGACTGGCTAAGGGTATTTGTATTTGTTTCTATCTATTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAAACTGACTGGCTAAGGGTATTTGTATTTGTTTCTATCTATTA  499

seq1  CAGAAGGAAAGATCTCTGATGGTGGCTGATCAAGACCCTGATATATATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAAAGATCTCTGATGGTGGCTGATCAAGACCCTGATATATATAT  549

seq1  AATTTAGAATTAGAAAACTATTATTTATAGATAGATTTAAGGTGTGATAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAATTAGAAAACTATTATTTATAGATAGATTTAAGGTGTGATAC  599

seq1  AGGTTTCCAAAAATGTGGCAGTGAGAATACCAGCATAAAAAAGAGAAACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCAAAAATGTGGCAGTGAGAATACCAGCATAAAAAAGAGAAACT  649

seq1  TGTGCTAAAAACAACCTGAGTTCATCATTGGCAATATTACACATCAATCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAAAAACAACCTGAGTTCATCATTGGCAATATTACACATCAATCA  699

seq1  AGGCTCTCACATACTCATATCCATTTTGACTATATTGCTGACCTCCCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTCACATACTCATATCCATTTTGACTATATTGCTGACCTCCCATG  749

seq1  CACCAAGAAACAAAGTGATCAAATTTGGGAAGCATTTAGGTACTCCATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGAAACAAAGTGATCAAATTTGGGAAGCATTTAGGTACTCCATTA  799

seq1  ATTTTAAGATATTAGGAAAAGTTTGGGAGATTTGCAAAATATAGCCTAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGATATTAGGAAAAGTTTGGGAGATTTGCAAAATATAGCCTAAT  849

seq1  TATCCATGTGAACAATCTCATTTCTAGTCATTTCTGCAGTGATCATTAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATGTGAACAATCTCATTTCTAGTCATTTCTGCAGTGATCATTAGT  899

seq1  GAATAAAAAACAGATTTACACGATTATATAGCAGGGAATATGGTTCAACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAAACAGATTTACACGATTATATAGCAGGGAATATGGTTCAACA  949

seq1  CAAAAACTGTTACAAAGTTGAGGTAAATACATGTTTCATAAGTCACTGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTGTTACAAAGTTGAGGTAAATACATGTTTCATAAGTCACTGCT  999

seq1  ATCATTTAAAGATTTAAATAAAATTCCAAAACTTGGTAAGCAAATAATGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAAAGATTTAAATAAAATTCCAAAACTTGGTAAGCAAATAATGA  1049

seq1  CAAGACAACTAAGAAGAATTTTCCACCATTTACTCTTGTTATCAAAAATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAACTAAGAAGAATTTTCCACCATTTACTCTTGTTATCAAAAATA  1099

seq1  GTTGAATTC  1105
      |||||||||
seq2  GTTGAATTC  1108

seq1: chr13_66797769_66798849
seq2: B6Ng01-295B23.g_67_1154

seq1  GAATTCCAGGACAGCCAGGGCTACATAAAGAAACCCTGTCTGGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACATAAAGAAACCCTGTCTGGAAAAACC  50

seq1  AAAAATAAATAAATAAACAAATAAATCCATATATCAACCAGTAACCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAATAAACAAATAAATCCATATATCAACCAGTAACCCAAG  100

seq1  GTATAAAACTCCCACCCAAACAGCTCAAACCAAGAAACCAAATCACCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAACTCCCACCCAAACAGCTCAAACCAAGAAACCAAATCACCTCA  150

seq1  AACCCAGAGGCCTAGACACCAGCAAATGAATATAATGAATAATAGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGAGGCCTAGACACCAGCAAATGAATATAATGAATAATAGCCAGG  200

seq1  AAAATATATCACCATCAAATCCAAGCTATCCTATCACAGCAGGTCCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATCACCATCAAATCCAAGCTATCCTATCACAGCAGGTCCTGAG  250

seq1  AAATTGAAACATGCAATAGATACAGTGGAAAAATGGTTGTTTGCGGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAACATGCAATAGATACAGTGGAAAAATGGTTGTTTGCGGTAAC  300

seq1  GGAGAGGAGTGAAAACATGGGGGAAGGGATAGCTGTGCACAGGAAGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGTGAAAACATGGGGGAAGGGATAGCTGTGCACAGGAAGACCT  350

seq1  GCAGACAGGCACACAGACAGAGAGCAGAGAGAGACAGCCACAAGAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGGCACACAGACAGAGAGCAGAGAGAGACAGCCACAAGAATAGG  400

seq1  GAAATAGAATGGGGGTTGGGGGAGAGCATGTGCAGAGAACAGAGACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAATGGGGGTTGGGGGAGAGCATGTGCAGAGAACAGAGACAGGG  450

seq1  AACAAAGTACAGAGCTGCTCTAGCTGGTGGTCCATGTATATAAAGCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTACAGAGCTGCTCTAGCTGGTGGTCCATGTATATAAAGCACAC  500

seq1  CTGACAACAGCAGCAGGTGATGGAGACAGGTAACGACTTAAGCATTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAACAGCAGCAGGTGATGGAGACAGGTAACGACTTAAGCATTTGCT  550

seq1  AAGTCCCTAAGAGCAGGCCATTGAATTTGCTGTACACTGTCAACCACGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTAAGAGCAGGCCATTGAATTTGCTGTACACTGTCAACCACGGA  600

seq1  GGCAAGGTACACCCTTGGTCCAGGAAGGGAAGAGAGACTCTCAGGCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGTACACCCTTGGTCCAGGAAGGGAAGAGAGACTCTCAGGCATTA  650

seq1  GAGATGAATAGAAAAAAATGATAAAATGGTCAAAAAATATGAATTCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAATAGAAAAAAATGATAAAATGGTCAAAAAATATGAATTCCAAA  700

seq1  TGTTCT-GGCACTAAATAATCACAATTT-CTGCAACATATGAGAAGG-TG  747
      |||||| |||||||||||||||| |||| |||||||||||||||||| ||
seq2  TGTTCTGGGCACTAAATAATCACCATTTCCTGCAACATATGAGAAGGTTG  750

seq1  AAAAGTAGAAATTATT-GGAATAGAAGAAGAATATC-AGCTCAAAGGTCT  795
      |||||||||||||||| ||||||||||||||||||| ||||| |||||||
seq2  AAAAGTAGAAATTATTGGGAATAGAAGAAGAATATCAAGCTC-AAGGTCT  799

seq1  A-GAAAATA--TTTTCA-GTGAAATTA-TGAATGAAAAATTTT-CTAAAC  839
      | |||||||  |||||| ||||||||| ||| ||||||||||| |||| |
seq2  AGGAAAATAATTTTTCAGGTGAAATTATTGATTGAAAAATTTTCCTAACC  849

seq1  TAAAGAAAATACCTAT-CAAAGTAC-AAGAAGCATCAAAAATAGCAAATA  887
      ||||| |||||||||| ||| |||| |||||||||| |||||||| ||||
seq2  TAAAG-AAATACCTATCCAAGGTACAAAGAAGCATC-AAAATAGC-AATA  896

seq1  GATTGGACCAAAAAAGTCC-TTTTGCCACATAACAGTCAAAACTC-TAAA  935
      ||||||||| ||||||||| ||||||||| | |||||| || ||| ||||
seq2  GATTGGACCCAAAAAGTCCTTTTTGCCAC-TTACAGTCCAATCTCTTAAA  945

seq1  CATATAAAGCAAAGAAATATGAAAAACTG-CAACAGAAAGAAATAAAAAA  984
      ||||||||||||||||||||||||||||| |||||||| || || |||||
seq2  CATATAAAGCAAAGAAATATGAAAAACTGCCAACAGAAGGATAT-AAAAA  994

seq1  CTAAATAAAACAAAAACAAGTAACTTATGGAAGCAGACCTATTAGCTTCA  1034
      || | |||||| ||||| ||| |||| | | ||| ||||||||| |||| 
seq2  CT-ATTAAAAC-AAAACCAGTTACTTTTTGGAGCTGACCTATTA-CTTCC  1041

seq1  TATCTGTCTTCTCAAT-GTCTACTAGTAAAAACAACAGTGTTTGGATT  1081
      ||||||||||||| || |||||||||| |||||| ||||||| |||||
seq2  TATCTGTCTTCTCCATGGTCTACTAGT-AAAACATCAGTGTTGGGATT  1088