BAC Information

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BAC

Clone NameB6Ng01-299B05
Chromosome13 (Build37)
Map Location 87,670,397 - 87,671,491
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC675707, LOC667230, EG435375
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299B05.bB6Ng01-299B05.g
ACCGA094017GA094018
length1,1951,091
definitionB6Ng01-299B05.b B6Ng01-299B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaaaggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgattgaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacagtgtcttttgccttgcagaagctttgcagttttat
gaggtcccatttgtcaattctcgatcttacagtgcaagccattgatgttc
tattcaggaatttttcccctgtgcccatatctccaaggcttttccgaact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggaaataggaatgtattgattcaca
ttcttctacattatagcaaccagttgtgccagcaccatttgttgaaaatg
ctgtatttcttccactggatagttttagctcccttgtcgaagatcaaatg
accataggtgtgtgggttcatttctgggtcttcaattctattccattgtt
ctacttgtctgtcactataccagtaccatgcagtttttatcactattgct
ctgtagtaaatctttagttcagacatggtgattccaccataggttctttt
atccttgagaacagtttttgctatcctaggttttttgttattctagataa
atgtgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgtattaaatctgtagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgaacatgggagatttttccatcttc
tgagatcttctttaattttttttcttcagagacttgaagttcttatcata
cagatctttcactcccttagttagagtcaagccaaaggtattttatatta
tttgtgactattgagaagggtgttgtttcctaaatttctttctcagcatg
tttattcttgtgtagagaagccattgactttcttgagttaatttatatcc
agcctaccttcactgaagctgtttatcagcttaggagttctcctgtttgg
aagtttaagggtcaatctaataatataatcaattcatctgcaaaacggtg
aattttggacttccatctctgtttcaacttgtggttatacgcaac

gaattctgagatgtggttggggtgaacagaggcagaatctggtttgcttt
tttagcagtagtgactactgtattgcatctagtggaacagagattgaaag
aggagaagggttaagagcagcctatttggttttctggcaagtgtggccag
agacttagcaagaggttcctattgtagttaggaatggggtacaggtatgg
ctaggggaagagaagactgggaatgtggctttgttgcagcattaagcaag
aaacttaagaactgaagaatttgggggaaccaagagggaaagagaagttc
agtgggaaatctatatggttttctggcaggcatccctgtagctttctttt
ctcttaacacagaatatttgacccaaattcttcaagggaggacagatttg
ctttgttcatgttttcagatattgcattgcattgtagtaataatacaaat
attctagttggtgttttgttgttgataataaacaccatatcaaaaacaat
tttggggcatatgctttagtttacacattaacatctgtcatcaagggata
ctaagggatcaaggcaaatactacagagaaacactactaattgaatcatt
tcctgttttgtttagatatctttcttatatctcagttctggctacccgag
aaaaccatggcttatagtgggttaagctttcctaaatcaattacctatca
atgaatttcctcagaaaaaatgtacacagaaatttataatgtgggatttc
atcgagttaatcatactagacatttctatgtgttgtcaagtttataaaaa
actaactatgacagcatgaataagtaaaatagatatcatatcatgaggga
agcacagagaaaaaaaatacttacactcaatccctgtcttctttttcaaa
tttttattatttctaggccctattctatgttatctagaaatacatattaa
aattcattacacatattaaatgtgatctttccctatcaagtaatattgtc
agaaataccttcaaagacatacatatacacatatttactatataagtagg
taatctatcttattcaaaaatattagattactatagaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87670397_87671491
seq2: B6Ng01-299B05.g_70_1160

seq1  GAATTCTGAGATGTGGTTGGGGTGAACAGAGGCAGAATCTGGTTTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGATGTGGTTGGGGTGAACAGAGGCAGAATCTGGTTTGCTTT  50

seq1  TTTAGCAGTAGTGACTACTGTATTGCATCTAGTGGAACAGAGATTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGTAGTGACTACTGTATTGCATCTAGTGGAACAGAGATTGAAAG  100

seq1  AGGAGAAGGGTTAAGAGCAGCCTATTTGGTTTTCTGGCAAGTGTGGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGGGTTAAGAGCAGCCTATTTGGTTTTCTGGCAAGTGTGGCCAG  150

seq1  AGACTTAGCAAGAGGTTCCTATTGTAGTTAGGAATGGGGTACAGGTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAGCAAGAGGTTCCTATTGTAGTTAGGAATGGGGTACAGGTATGG  200

seq1  CTAGGGGAAGAGAAGACTGGGAATGTGGCTTTGTTGCAGCATTAAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGAAGAGAAGACTGGGAATGTGGCTTTGTTGCAGCATTAAGCAAG  250

seq1  AAACTTAAGAACTGAAGAATTTGGGGGAACCAAGAGGGAAAGAGAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAAGAACTGAAGAATTTGGGGGAACCAAGAGGGAAAGAGAAGTTC  300

seq1  AGTGGGAAATCTATATGGTTTTCTGGCAGGCATCCCTGTAGCTTTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAATCTATATGGTTTTCTGGCAGGCATCCCTGTAGCTTTCTTTT  350

seq1  CTCTTAACACAGAATATTTGACCCAAATTCTTCAAGGGAGGACAGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACACAGAATATTTGACCCAAATTCTTCAAGGGAGGACAGATTTG  400

seq1  CTTTGTTCATGTTTTCAGATATTGCATTGCATTGTAGTAATAATACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCATGTTTTCAGATATTGCATTGCATTGTAGTAATAATACAAAT  450

seq1  ATTCTAGTTGGTGTTTTGTTGTTGATAATAAACACCATATCAAAAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTTGGTGTTTTGTTGTTGATAATAAACACCATATCAAAAACAAT  500

seq1  TTTGGGGCATATGCTTTAGTTTACACATTAACATCTGTCATCAAGGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGCATATGCTTTAGTTTACACATTAACATCTGTCATCAAGGGATA  550

seq1  CTAAGGGATCAAGGCAAATACTACAGAGAAACACTACTAATTGAATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGATCAAGGCAAATACTACAGAGAAACACTACTAATTGAATCATT  600

seq1  TCCTGTTTTGTTTAGATATCTTTCTTATATCTCAGTTCTGGCTACCCGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTTGTTTAGATATCTTTCTTATATCTCAGTTCTGGCTACCCGAG  650

seq1  AAAACCATGGCTTATAGTGGGTTAAGCTTTCCTAAATCAATTACCTATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATGGCTTATAGTGGGTTAAGCTTTCCTAAATCAATTACCTATCA  700

seq1  ATGAATTTCCTCAGAAAAAATGTACACAGAAATTTATAATGTGGGATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTCCTCAGAAAAAATGTACACAGAAATTTATAATGTGGGATTTC  750

seq1  ATCGAGTTAATCATACTAGACATTTCTATGTGTTGTCAAGTTTATAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGTTAATCATACTAGACATTTCTATGTGTTGTCAAGTTTATAAAAA  800

seq1  ACTAACTATGACAGCATGAATAAGTAAAATAGATATCATATCATGAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTATGACAGCATGAATAAGTAAAATAGATATCATATCATGAGGGA  850

seq1  AGCACAGAGAAAAAAAATACTTACACTCAATCCCTGTCTTCTTTTTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGAAAAAAAATACTTACACTCAATCCCTGTCTTCTTTTTCAAA  900

seq1  TTTTTATTATTTCTAGGCCCTATTCTATGTTATCTAGAAATACATATT-A  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTTTATTATTTCTAGGCCCTATTCTATGTTATCTAGAAATACATATTAA  950

seq1  AATTCATTACACATATTAAATGTGATCTTTCCCTATCAGGTAATATTGTC  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATTCATTACACATATTAAATGTGATCTTTCCCTATCAAGTAATATTGTC  1000

seq1  AGGAAATACCTTCAAAGACATACATATACACATATTTTACTATTATAGTA  1049
      | |||||||||||||||||||||||||||||||| ||||||||   ||||
seq2  A-GAAATACCTTCAAAGACATACATATACACATA-TTTACTATATAAGTA  1048

seq1  GGTATTCTTAATC-TAATCAAAAATATAAGATTTACTATTAGAAGAA  1095
      |||| |||  ||| || |||||||||| ||| |||||| ||||||||
seq2  GGTAATCT--ATCTTATTCAAAAATATTAGA-TTACTA-TAGAAGAA  1091


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