BAC Information

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BAC

Clone NameB6Ng01-302H21
Chromosome13 (Build37)
Map Location 89,444,194 - 89,445,336
singlet/doubletsinglet
Overlap geneEdil3
Upstream geneLOC667230, EG435375
Downstream geneHapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302H21.bB6Ng01-302H21.g
ACCGA096525GA096526
length1,2021,119
definitionB6Ng01-302H21.b B6Ng01-302H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccggatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atgtatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggaatctatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccatttgcatacactagcaagattttattgaa
aggacccagatgtagctgtctctttgtgagactatgcccggggccctagc
aaacacagaagtggatgctcacagtcagctaatggatgggatcatagggc
tctcaatggaggagctaggagaaagtagtccaaggagctaaagggatctg
caacctaataggtgaccaacattatgaactaaccagtacccggagcttct
gacttctagctgcatatatatccagagatggctagtccgccatcactgga
aggagagtcccatggacttggcaacctttatatggcccagttacatggat
cccaaggcctaaaatgggtgaattggcttgaggccagggacctacgtgat
ga

gaattctttgtattctatctatgctctctaaaagtaaagactggtggtat
aaactagacaactacttataacagatcaaaaatttaattttcttcttagt
agttagactttttgaacttctttgattaaaaatgaaccaacaacattatt
gaaaataaaaacaaataaataaaaaagaatagattaagagtgctaacaaa
ccactatcatagacacatagactgtatacaaaatctatgagatgatattt
tattgaagtgagcataatattgtgtttcaatttaacttttaaataaattt
acagaaaaaaatacgacacagaagaataaagacacacttgtcctgctttg
ttgttaattattttgtcacccaaacccagaacttttctttttcagtattt
gatatactatcctcacttgggtccttcagcttgttgaacttttagagttc
tgtgggctgtatcttgggttttcagcactttttttttttttttttggctg
accatgtgttttgtcttgctaacagatgtttccatgagattttttaaaaa
tgcatatgaaaaaccctagcagtcttaacaaagaaacatggttatgaata
aacataataaatatttgatttttacaaacattaatgtattaatttccaaa
tcctcaaatgtccagaaaatttattttttattttatatatttttgtaatt
gtttcttttattgaaaatacttttttcttttgtttaattaatattttatt
tgtttacatcccaaattttgctcccctcctggtccccccaactgagctct
tacacccatacccctccccttaacttctgacagtggggggacactttttt
tcatataagataatctgatcaggatttcccctccccaaatatgcttgtcc
acacctctccacctactcaatccatatcttcttctcttttattagggaaa
agagaaaacaaacatttatattttacttcctcatcatcatgtaatcataa
acatggccatattgcagatggcagcatctctctcatttgcttatgcatat
agacacatacattgcaagtatgacaatattctaagagaagaattactcat
atctggcagaggaattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_89444194_89445336
seq2: B6Ng01-302H21.g_67_1185

seq1  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50

seq1  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100

seq1  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150

seq1  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200

seq1  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250

seq1  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300

seq1  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350

seq1  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400

seq1  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450

seq1  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500

seq1  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550

seq1  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600

seq1  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650

seq1  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700

seq1  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750

seq1  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800

seq1  TACACCCATACCCCTCCCCTTAACTTCTGACAGTGGGGGGACAC-TTTTT  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TACACCCATACCCCTCCCCTTAACTTCTGACAGTGGGGGGACACTTTTTT  850

seq1  TCATATAAGATAATCTGATCAGGATTTCCCCTCCCCAAATATGCTTGTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGATAATCTGATCAGGATTTCCCCTCCCCAAATATGCTTGTCC  900

seq1  ACACCTCTCCACCTACTCAAATCCATATCTTCTTTCTCTTTTTATTTAGG  949
      |||||||||||||||||| ||||||||||||| |||||||||   |||||
seq2  ACACCTCTCCACCTACTC-AATCCATATCTTC-TTCTCTTTT--ATTAGG  946

seq1  AAAAAGAGAAAAACAAAACATTTATATTTTTACTTCCTCATCATTCATTG  999
       |||||||||||   ||||||||||| |||||||||||||||| ||| ||
seq2  GAAAAGAGAAAA--CAAACATTTATA-TTTTACTTCCTCATCA-TCA-TG  991

seq1  TAAATCAATAAACATGCCCATATTGCAGATGGCAAGCATCTTCTCTCATT  1049
      | |||| ||||||||| |||||||||||||||| |||||| ||||||| |
seq2  T-AATC-ATAAACATGGCCATATTGCAGATGGC-AGCATC-TCTCTCA-T  1036

seq1  TTGCTTATGCAATATTAGACACATTACATGGCAAAATAATGACAATATTC  1099
      |||||||||| ||| |||||||| ||||| ||  ||  ||||||||||||
seq2  TTGCTTATGC-ATA-TAGACACA-TACATTGC--AAGTATGACAATATTC  1081

seq1  CTTAAGAGAAGATATTACTCATTATTCTGGCCAGAGGAATTTTG  1143
        |||||||||| |||||||||   ||||| |||||||||||||
seq2  --TAAGAGAAGA-ATTACTCAT--ATCTGG-CAGAGGAATTTTG  1119


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