BAC Information

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BAC

Clone NameB6Ng01-302N22
Chromosome13 (Build37)
Map Location 88,652,565 - 88,653,480
singlet/doubletsinglet
Overlap geneEG435375
Upstream geneLOC675707, LOC667230
Downstream geneEdil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302N22.bB6Ng01-302N22.g
ACCGA096811GA096812
length949133
definitionB6Ng01-302N22.b B6Ng01-302N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaaacaacctcctgaaattaggagtgataaatggcattgact
ctccactattaaggaacagtggaagggaataaagagaagatagatgcggc
tgcatagataatttggtgcgtcacaggtcttgctgaatatgcctgacaat
gagttcaggtagccaaaggtgactctaatatatgaattctggggatcaga
aacagaaggataacttgtggagttgctggttttgagcctacctttgaatt
cagtaaaagactatcaatcaaaggaatattctggaaattgttagtgtagg
gagtctgacatctgggccctatacatgagcatgcatatccacaggcataa
atgttacatagagatgtaacacacacacacacacacacacacacatgagc
gcgcacacacacttagattaaagggcatgggaagtggacatttctgtttt
ctttggtgtctaagttctgtttttttttttttttttcctgaaagctgact
tatgagaggatgttttgttgagaacagacacatggtgtttttctgaaaaa
agggcacgtgatgtttgctaggtgatgtttgctagagtggatgcttgaca
gaacacatgatgttcggaaaggatatatatatatatatatatatatatat
atatatatatatacacacatatatatacatatatgatgtttggaaaggat
acacacacacacacacacacacacacacacacacatatatacatatacat
atacatatatataaacccctaccgacagaggacaaatgatgtgtgggcat
tggttttgccttgctactctttgcctggtcttcactggattttgtttata
actggttctttgctaaatgacactgtgacattgggttttgcccttgtctt
ccttcactgacacaaagaagaagaaacacacagaaagaaacttttttat

tttgttcagctatgagccccattttttaatggggttatttgattttctgg
agtccactttcttgcaaactttatatgccccagtacaggggaacgccagg
gccaaaaagggggagtgggtgggtaggggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88652565_88653480
seq2: B6Ng01-302N22.b_46_975 (reverse)

seq1  TGTGTTTCT--CTCTTTGTGTCAGTGAA-GAAGGCAA-GGCAAA--CCAA  44
      |||||||||   |||||||||||||||| |||| ||| ||||||  ||||
seq2  TGTGTTTCTTCTTCTTTGTGTCAGTGAAGGAAGACAAGGGCAAAACCCAA  50

seq1  TGTCACAGTGTCA-TTAGCAAAG-ACCAG-TATAAACAAAATCCAGTGAA  91
      ||||||||||||| ||||||||| ||||| ||||||||||||||||||||
seq2  TGTCACAGTGTCATTTAGCAAAGAACCAGTTATAAACAAAATCCAGTGAA  100

seq1  GACCA-GCAAAGAGTAGCAAGGC-AAACCAATG-CCACACATCA-TTGTC  137
      ||||| ||||||||||||||||| ||||||||| |||||||||| |||||
seq2  GACCAGGCAAAGAGTAGCAAGGCAAAACCAATGCCCACACATCATTTGTC  150

seq1  CTCTGTCGGTA-GGGTTTATATATATGTATATGTATATGTATATATGTGT  186
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCGGTAGGGGTTTATATATATGTATATGTATATGTATATATGTGT  200

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCCTTTCCAAACATCATAT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCCTTTCCAAACATCATAT  250

seq1  ATGTATATATATGTGTGTATATATATATATATATATATATATATATATAT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATATGTGTGTATATATATATATATATATATATATATATATAT  300

seq1  ATATATATCCTTTCCGAACATCATGTGTTCTGTCAAGCATCCACTCTAGC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCTTTCCGAACATCATGTGTTCTGTCAAGCATCCACTCTAGC  350

seq1  AAACATCACCTAGCAAACATCACGTGCCCTTTTTTCAGAAAAACACCATG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCACCTAGCAAACATCACGTGCCCTTTTTTCAGAAAAACACCATG  400

seq1  TGTCTGTTCTCAACAAAACATCCTCTCATAAGTCAGCTTTCAGGAAAAAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCTCAACAAAACATCCTCTCATAAGTCAGCTTTCAGGAAAAAA  450

seq1  AAAAAAAAAAACAGAACTTAGACACCAAAGAAAACAGAAATGTCCACTTC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACAGAACTTAGACACCAAAGAAAACAGAAATGTCCACTTC  500

seq1  CCATGCCCTTTAATCTAAGTGTGTGTGCGCGCTCATGTGTGTGTGTGTGT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCTTTAATCTAAGTGTGTGTGCGCGCTCATGTGTGTGTGTGTGT  550

seq1  GTGTGTGTGTGTTACATCTCTATGTAACATTTATGCCTGTGGATATGCAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTTACATCTCTATGTAACATTTATGCCTGTGGATATGCAT  600

seq1  GCTCATGTATAGGGCCCAGATGTCAGACTCCCTACACTAACAATTTCCAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGTATAGGGCCCAGATGTCAGACTCCCTACACTAACAATTTCCAG  650

seq1  AATATTCCTTTGATTGATAGTCTTTTACTGAATTCAAAGGTAGGCTCAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTTTGATTGATAGTCTTTTACTGAATTCAAAGGTAGGCTCAAA  700

seq1  ACCAGCAACTCCACAAGTTATCCTTCTGTTTCTGATCCCCAGAATTCATA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAACTCCACAAGTTATCCTTCTGTTTCTGATCCCCAGAATTCATA  750

seq1  TATTAGAGTCACCTTTGGCTACCTGAACTCATTGTCAGGCATATTCAGCA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAGTCACCTTTGGCTACCTGAACTCATTGTCAGGCATATTCAGCA  800

seq1  AGACCTGTGACGCACCAAATTATCTATGCAGCCGCATCTATCTTCTCTTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGTGACGCACCAAATTATCTATGCAGCCGCATCTATCTTCTCTTT  850

seq1  ATTCCCTTCCACTGTTCCTTAATAGTGGAGAGTCAATGCCATTTATCACT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTCCACTGTTCCTTAATAGTGGAGAGTCAATGCCATTTATCACT  900

seq1  CCTAATTTCAGGAGGTTGTTTCATGAATTC  916
      ||||||||||||||||||||||||||||||
seq2  CCTAATTTCAGGAGGTTGTTTCATGAATTC  930


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