BAC Information

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BAC

Clone NameB6Ng01-303P12
Chromosome13 (Build37)
Map Location 14,917,051 - 14,918,180
singlet/doubletsinglet
Overlap genenone
Upstream geneGng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32, Psma2, AW209491
Downstream geneEG665099, LOC670994, EG625121, Gli3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303P12.bB6Ng01-303P12.g
ACCGA097638GA097639
length1,127901
definitionB6Ng01-303P12.b B6Ng01-303P12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtcgg
caatgggaggattttaaaattaactataattcactgagtgggatctctag
agctaattttgcattaattacacttgctctgcaaattcccttgtgtaata
gaaaagtgttattgttaaatacttgtaagatgtggtgtcttctgtatctt
tctggaaattaacgatggtataataagggtgtttaaaaattttacgttga
agaaacttgttttaatgttttcaagccttttaaccagcaaatttatgaac
atgacctatcgatgccccttaaaacctaggttatttatcatggtctttgg
gagaggctgggaaatgatcatctgaagggacagagcccgagactacaaac
ttagtggtctgcaatctgctgcacactaatctttcttggctggatccaag
acataccgagaaagaagcacttgctaatcacccagattgtttgatgcacc
aatggctctcctatatcattagtagccactgaatatgcattacatgttcg
agctcctcacatagacagtatttcatcatgactaccaaatgtctgccttc
tttcagctacaactcttgagcattgccgcagaccctcttggcccctttgt
ctgcgtggaacgggtctctagtcacgggtggacaaagcgtaggatgaatt
gacagacagactcacacaggagaggtcgtgtggaatctgaacgtattttt
caaatcgaacatcagacgttttatgcagaagacaataaggaagttgggta
acatattcgaaaggtacaaatgaggtaaccagaatcttacataaaacaga
ggaacgcaaacacaaaaggtctaaagggaaaccacccgggatagaattca
ttgttaacaactgggatcaaaaaggtgccacctaagattcgcttaatctt
cgcttcacgccctttgccatagttcctattttagtcttattgtaatagtc
cacttcccgtagccattgtaatacgtgtgtatgggtgtacttcgctatta
ggtctagtatctatctgatttctcctt
gaattcctgatctttccaagatttttaccatgaaggggtgttcgattttg
ttaaatgctttctcagcatctaatgagatggtcatgtggtgtttttcttt
gagtttgtttatatagtggattatgttgatggaattccatatattgaact
acccctgcattcatgggaagaagactatttgataataaaggatgattgtt
ttgatgtgttcttggattctgtttgcaagaatttttttttttaatgtaat
ttcttttttttttttttccattttttattaggtatttaactcatttacat
ttccaatgctataccaaaagtcccccatatccacccacccccactcccct
gcccacccactccccctttttggccctggaattcccctgtactggggcat
ataaagtttgcaagtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatatatatgcagctagagtcaagagctccggggtactgg
ttagctcataatgttgttccacctatagggttgcagatccctttagctcc
ttggctactttctctagctcctccattgggagccctatgatccatccatt
agctgactgtgagcatccacttctgtgtttgtttgcaagaattttattga
gtattttgcaacgatagtcataagcaaaattggtctgaacttctcattct
ttttacgtctttatgtggtttagatataagcataattgtggattcataga
atgaagttggtagtgttccttctttttcttttgtgtgggaataatttgaa
agaatagttgtattaagtcttctttgaaggtcctgatagatttttgttgt
tgttgttgttgttggaagacttttactgactgcttctatttctttaaggt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_14917051_14918180
seq2: B6Ng01-303P12.b_47_1173

seq1  GAATTCTTCGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCGG  100

seq1  CAATGGGAGGATTTTAAAATTAACTATAATTCACTGAGTGGGATCTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAGGATTTTAAAATTAACTATAATTCACTGAGTGGGATCTCTAG  150

seq1  AGCTAATTTTGCATTAATTACACTTGCTCTGCAAATTCCCTTGTGTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTTTGCATTAATTACACTTGCTCTGCAAATTCCCTTGTGTAATA  200

seq1  GAAAAGTGTTATTGTTAAATACTTGTAAGATGTGGTGTCTTCTGTATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGTTATTGTTAAATACTTGTAAGATGTGGTGTCTTCTGTATCTT  250

seq1  TCTGGAAATTAACGATGGTATAATAAGGGTGTTTAAAAATTTTACGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAATTAACGATGGTATAATAAGGGTGTTTAAAAATTTTACGTTGA  300

seq1  AGAAACTTGTTTTAATGTTTTCAAGCCTTTTAACCAGCAAATTTATGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTGTTTTAATGTTTTCAAGCCTTTTAACCAGCAAATTTATGAAC  350

seq1  ATGACCTATCGATGCCCCTTAAAACCTAGGTTATTTATCATGGTCTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTATCGATGCCCCTTAAAACCTAGGTTATTTATCATGGTCTTTGG  400

seq1  GAGAGGCTGGGAAATGATCATCTGAAGGGACAGAGCCCGAGACTACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTGGGAAATGATCATCTGAAGGGACAGAGCCCGAGACTACAAAC  450

seq1  TTAGTGGTCTGCAATCTGCTGCACACTAATCTTTCTTGGCTGGATCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTCTGCAATCTGCTGCACACTAATCTTTCTTGGCTGGATCCAAG  500

seq1  ACATACCGAGAAAGAAGCACTTGCTAATCACCCAGATTGTTTGATGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCGAGAAAGAAGCACTTGCTAATCACCCAGATTGTTTGATGCACC  550

seq1  AATGGCTCTCCTATATCATTAGTAGCCACTGAATATGCATTACATGTTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTCTCCTATATCATTAGTAGCCACTGAATATGCATTACATGTTCG  600

seq1  AGCTCCTCACATAGACAGTATTTCATCATGACTACCAAATGTCTGCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCACATAGACAGTATTTCATCATGACTACCAAATGTCTGCCTTC  650

seq1  TTTCAGCTACAACTCTTGAGCATTGCCGCAGACCCTCTTGGCCCCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTACAACTCTTGAGCATTGCCGCAGACCCTCTTGGCCCCTTTGT  700

seq1  CTGCGTGGAACGGGTCTCTAGTCACGGGTGGACAAAGCGTAGGATGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGGAACGGGTCTCTAGTCACGGGTGGACAAAGCGTAGGATGAATT  750

seq1  GACAGACAGACTCACACAGGAGAGGTCGTGTGGAATCTGAACGTATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACTCACACAGGAGAGGTCGTGTGGAATCTGAACGTATTTTT  800

seq1  CAAATCGAACATCAGACGTTTTATGCAGAAGACAATAAGGAAGTTGGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCGAACATCAGACGTTTTATGCAGAAGACAATAAGGAAGTTGGGTA  850

seq1  ACATATTCGAAAGGTACAAATGAGGTAACCAGAATCTTACATAAAACAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCGAAAGGTACAAATGAGGTAACCAGAATCTTACATAAAACAGA  900

seq1  GGAACGCAAACACAAAAGGTCTAAAGGG-AACCACCCGGGATAGAATTCA  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGAACGCAAACACAAAAGGTCTAAAGGGAAACCACCCGGGATAGAATTCA  950

seq1  TTGTTAACAACTGGGATCAAAAAGGGTGCCACCTAAGATTCGCTTAATCT  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGTTAACAACTGGGATCAAAAA-GGTGCCACCTAAGATTCGCTTAATCT  999

seq1  TCGCTTCACGCCC-TTGCCATAGTTCCTATTTTAGTC-TATTGT-ATAGT  1046
      ||||||||||||| ||||||||||||||||||||||| |||||| |||||
seq2  TCGCTTCACGCCCTTTGCCATAGTTCCTATTTTAGTCTTATTGTAATAGT  1049

seq1  CCACCTTCCCCTTAGGCCATTGTAAATACGTGTGTATGGGTGTAACTTCG  1096
      ||| |||||| |   |||||||| ||||||||||||||||||| ||||||
seq2  CCA-CTTCCCGT--AGCCATTGT-AATACGTGTGTATGGGTGT-ACTTCG  1094

seq1  CTA-TAGTTCTAAGTATCTATTCTGGTTTCTCCTT  1130
      ||| ||| ||| |||||||| |||| |||||||||
seq2  CTATTAGGTCT-AGTATCTA-TCTGATTTCTCCTT  1127