BAC Information

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BAC

Clone NameB6Ng01-304E09
Chromosome13 (Build37)
Map Location 12,095,935 - 12,228,366
singlet/doubletdoublet
Overlap geneRyr2
Upstream geneLOC100039648, Zp4
Downstream geneLOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304E09.bB6Ng01-304E09.g
ACCGA097871GA097872
length648413
definitionB6Ng01-304E09.b B6Ng01-304E09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,227,823 - 12,228,366)(12,095,935 - 12,096,353)
sequence
gaattccaagcccatggtctgctcaaggactttctaggactgttggaaca
ctggtgaaggcttagctacgtcagaattcaatcttaaaaggcacttataa
taggataatactaaaagagagcacctggatccatataccagactaacgcg
ggaatggaatattaatgtatgggttagagaggacaccagactccaggagg
tgagtttccgtgaaactctttgcctcgtgagtagcttccaagcctcttgg
cctgtcaagctgactcgaccagagtgcttggcactgtggttttatggaag
caatatgttttttttttctatgttgatgttagagaacgtttagtcgtccc
ccccccccccccatatagccttcgcttcttttggggcccatattagggac
ttttctaccatgtctagtgatttgggccatctgcttatacttcagactag
ggttctgtgacggatgtcagaggatctttgttgtatagtggctcttgtgg
gtttgtgacttcacttcagagggtggggctggcaggtggtgtggggaaga
gagtgtcagggtatgaaacttttcatgaagagcatggattaggttcctag
gagaaggaaattctcatgtttctgggccggggggtgggtgtggggatt
aggtgtactatatatctataactccagcactaatgttggggagaggcctg
gaacttggggagttcactggtcagcattctagtctagttgggagctccag
gttcagtgaagaaaaaataaggtagagaatttttgagaatgagacccaac
attaacctttggcttccacacgcatacatggacaacataaacacactttt
tgtaaataaagttttgtaaaatacatcaagatctcaaggccttctgattg
tatgatgttaactatgcctgtctaacaacccttgtaccaggactgaaatc
cttcaatgaaaccagagagaagaagaaagcagcataactttcagtaagat
cacagaaggttctggaaggaaaaggacagaaggaaggaaggaaggaaggg
agggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12227823_12228366
seq2: B6Ng01-304E09.b_151_694 (reverse)

seq1  AATCCCCACACCCACCCCCCGGCCCAGAAACATGAGAATTTCCTTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCACACCCACCCCCCGGCCCAGAAACATGAGAATTTCCTTCTCCT  50

seq1  AGGAACCTAATCCATGCTCTTCATGAAAAGTTTCATACCCTGACACTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTAATCCATGCTCTTCATGAAAAGTTTCATACCCTGACACTCTC  100

seq1  TTCCCCACACCACCTGCCAGCCCCACCCTCTGAAGTGAAGTCACAAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACACCACCTGCCAGCCCCACCCTCTGAAGTGAAGTCACAAACCC  150

seq1  ACAAGAGCCACTATACAACAAAGATCCTCTGACATCCGTCACAGAACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCCACTATACAACAAAGATCCTCTGACATCCGTCACAGAACCCT  200

seq1  AGTCTGAAGTATAAGCAGATGGCCCAAATCACTAGACATGGTAGAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGTATAAGCAGATGGCCCAAATCACTAGACATGGTAGAAAAGT  250

seq1  CCCTAATATGGGCCCCAAAAGAAGCGAAGGCTATATGGGGGGGGGGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATATGGGCCCCAAAAGAAGCGAAGGCTATATGGGGGGGGGGGGGG  300

seq1  GACGACTAAACGTTCTCTAACATCAACATAGAAAAAAAAAACATATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGACTAAACGTTCTCTAACATCAACATAGAAAAAAAAAACATATTGCT  350

seq1  TCCATAAAACCACAGTGCCAAGCACTCTGGTCGAGTCAGCTTGACAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAACCACAGTGCCAAGCACTCTGGTCGAGTCAGCTTGACAGGCC  400

seq1  AAGAGGCTTGGAAGCTACTCACGAGGCAAAGAGTTTCACGGAAACTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCTTGGAAGCTACTCACGAGGCAAAGAGTTTCACGGAAACTCACC  450

seq1  TCCTGGAGTCTGGTGTCCTCTCTAACCCATACATTAATATTCCATTCCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGTCTGGTGTCCTCTCTAACCCATACATTAATATTCCATTCCCG  500

seq1  CGTTAGTCTGGTATATGGATCCAGGTGCTCTCTTTTAGTATTAT  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGTCTGGTATATGGATCCAGGTGCTCTCTTTTAGTATTAT  544

seq1: chr13_12095935_12096353
seq2: B6Ng01-304E09.g_68_486

seq1  GAATTCAGGTGTACTATATATCTATAACTCCAGCACTAATGTTGGGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGTACTATATATCTATAACTCCAGCACTAATGTTGGGGAGA  50

seq1  GGCCTGGAACTTGGGGAGTTCACTGGTCAGCATTCTAGTCTAGTTGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGAACTTGGGGAGTTCACTGGTCAGCATTCTAGTCTAGTTGGGAG  100

seq1  CTCCAGGTTCAGTGAAGAAAAAATAAGGTAGAGAATTTTTGAGAATGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTTCAGTGAAGAAAAAATAAGGTAGAGAATTTTTGAGAATGAGA  150

seq1  CCCAACATTAACCTTTGGCTTCCACACGCATACATGGACAACATAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATTAACCTTTGGCTTCCACACGCATACATGGACAACATAAACAC  200

seq1  ACTTTTTGTAAATAAAGTTTTGTAAAATACATCAAGATCTCAAGGCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGTAAATAAAGTTTTGTAAAATACATCAAGATCTCAAGGCCTTC  250

seq1  TGATTGTATGATGTTAACTATGCCTGTCTAACAACCCTTGTACCAGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTATGATGTTAACTATGCCTGTCTAACAACCCTTGTACCAGGACT  300

seq1  GAAATCCTTCAATGAAACCAGAGAGAAGAAGAAAGCAGCATAACTTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCTTCAATGAAACCAGAGAGAAGAAGAAAGCAGCATAACTTTCAG  350

seq1  TAAGATCACAGAAGGTTCTGGAAGGAAAAGGACAGAAGGAAGGAAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCACAGAAGGTTCTGGAAGGAAAAGGACAGAAGGAAGGAAGGAAG  400

seq1  GAAGGGAGGGAGGGAGGGA  419
      |||||||||||||||||||
seq2  GAAGGGAGGGAGGGAGGGA  419