BAC Information

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BAC

Clone NameB6Ng01-304E18
Chromosome13 (Build37)
Map Location 6,311,521 - 6,444,004
singlet/doubletdoublet
Overlap geneLOC100039395
Upstream gene1700016G22Rik, Klf6, LOC100039388
Downstream genePitrm1, Pfkp, LOC100039532, LOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304E18.bB6Ng01-304E18.g
ACCGA097889GA097890
length926329
definitionB6Ng01-304E18.b B6Ng01-304E18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,311,521 - 6,312,091)(6,443,676 - 6,444,004)
sequence
gaattctcctaaggacaggactgggtggggggtttggggttgcaatcagg
gtataaagtgaataaaaagcaataaattactgaggaaaattccttaaagt
cttgcctataacctgattttatgaattttctcaaaggttccattattaat
tttattatttttactactactactactactattattattattattattat
tattattattattattattaattttacatcccactcattgcctttcttcc
agtcacccccacccacagttcttcatccatcccccctccccatctcctct
gagtgggtgcctccctccaagtatccccctactggcacttcaagtctctg
tgaggcttcctctcccactgaagccatacaagtcatcccagctacgagaa
catatgctacaaacagacaacactttgggagtatcctctgctccagttgt
ttggaacctgcaaggagaccaagctgcatgtctgctacatatgtgcatag
aggcctaggtccagcgcatttatgttctttagttgatagttcagactctg
agagccccaagggttcaggttagttgactcttttggtcttcctgaggagt
tcttattccctttggtccctcaatttttcttcccattcttccataggagt
ccccaagctccatccactgttttatgggtgtttgtatctgtctgagttag
ccactaggtggaatctctcagaagacaacatgctcttgtctgcaagcata
gcagactagatgaatagtgtcagggattggtgcttgcccatgggatgggt
ctcaagttaggctgggtcattggttggccatttcctcagtctctgcttca
tcccccatccttgtatttcttgtagaatatattttgggtcgaaatgtttt
ggtggggtggtttgatgtcactattg

ctcctgaaaaatgtttgtttgtttgtttgtttacttatttattgtgtcag
aagctctggcagaggcagaaggacagagcacctgtcagcttaagtacttc
ctgagagacctttgtagcatggcactgagtagcatgtctctttgttttcc
tctatacattctttctctgctggaagtattaggatagtaaatggctatgc
agatggacttttccttctggtcatggtaaagggaacctcaacatggggat
aggatcagacacattcatatcactaaagatcaattattaatatagtgatt
agttgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6311521_6312091
seq2: B6Ng01-304E18.b_44_614

seq1  GAATTCTCCTAAGGACAGGACTGGGTGGGGGGTTTGGGGTTGCAATCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAAGGACAGGACTGGGTGGGGGGTTTGGGGTTGCAATCAGG  50

seq1  GTATAAAGTGAATAAAAAGCAATAAATTACTGAGGAAAATTCCTTAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAGTGAATAAAAAGCAATAAATTACTGAGGAAAATTCCTTAAAGT  100

seq1  CTTGCCTATAACCTGATTTTATGAATTTTCTCAAAGGTTCCATTATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTATAACCTGATTTTATGAATTTTCTCAAAGGTTCCATTATTAAT  150

seq1  TTTATTATTTTTACTACTACTACTACTACTATTATTATTATTATTATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTTACTACTACTACTACTACTATTATTATTATTATTATTAT  200

seq1  TATTATTATTATTATTATTAATTTTACATCCCACTCATTGCCTTTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTAATTTTACATCCCACTCATTGCCTTTCTTCC  250

seq1  AGTCACCCCCACCCACAGTTCTTCATCCATCCCCCCTCCCCATCTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCCCCACCCACAGTTCTTCATCCATCCCCCCTCCCCATCTCCTCT  300

seq1  GAGTGGGTGCCTCCCTCCAAGTATCCCCCTACTGGCACTTCAAGTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGCCTCCCTCCAAGTATCCCCCTACTGGCACTTCAAGTCTCTG  350

seq1  TGAGGCTTCCTCTCCCACTGAAGCCATACAAGTCATCCCAGCTACGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTCCTCTCCCACTGAAGCCATACAAGTCATCCCAGCTACGAGAA  400

seq1  CATATGCTACAAACAGACAACACTTTGGGAGTATCCTCTGCTCCAGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCTACAAACAGACAACACTTTGGGAGTATCCTCTGCTCCAGTTGT  450

seq1  TTGGAACCTGCAAGGAGACCAAGCTGCATGTCTGCTACATATGTGCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACCTGCAAGGAGACCAAGCTGCATGTCTGCTACATATGTGCATAG  500

seq1  AGGCCTAGGTCCAGCGCATTTATGTTCTTTAGTTGATAGTTCAGACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAGGTCCAGCGCATTTATGTTCTTTAGTTGATAGTTCAGACTCTG  550

seq1  AGAGCCCCAAGGGTTCAGGTT  571
      |||||||||||||||||||||
seq2  AGAGCCCCAAGGGTTCAGGTT  571


seq1: chr13_6443676_6444004
seq2: B6Ng01-304E18.g_74_402 (reverse)

seq1  CACACACACACACACACACACACACAACTAATCACTATATTAATAATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAACTAATCACTATATTAATAATTGA  50

seq1  TCTTTAGTGATATGAATGTGTCTGATCCTATCCCCATGTTGAGGTTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTGATATGAATGTGTCTGATCCTATCCCCATGTTGAGGTTCCCT  100

seq1  TTACCATGACCAGAAGGAAAAGTCCATCTGCATAGCCATTTACTATCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATGACCAGAAGGAAAAGTCCATCTGCATAGCCATTTACTATCCTA  150

seq1  ATACTTCCAGCAGAGAAAGAATGTATAGAGGAAAACAAAGAGACATGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCAGCAGAGAAAGAATGTATAGAGGAAAACAAAGAGACATGCTA  200

seq1  CTCAGTGCCATGCTACAAAGGTCTCTCAGGAAGTACTTAAGCTGACAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGCCATGCTACAAAGGTCTCTCAGGAAGTACTTAAGCTGACAGGT  250

seq1  GCTCTGTCCTTCTGCCTCTGCCAGAGCTTCTGACACAATAAATAAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTCCTTCTGCCTCTGCCAGAGCTTCTGACACAATAAATAAGTAAA  300

seq1  CAAACAAACAAACAAACATTTTTCAGGAG  329
      |||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACATTTTTCAGGAG  329


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